MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 80213 bp
Accession: NZ_CP026818 Location: 1..80213 Organism: Shigella dysenteriae strain 96-265 Replicon: plasmid unnamed1
Accession: NZ_CP026818 Location: 1..80213 Organism: Shigella dysenteriae strain 96-265 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P77_RS00010 | 1009..1383 | - | 375 | WP_064198764.1 | hypothetical protein | - |
| C1P77_RS00015 | 1389..5162 | - | 3774 | WP_284512722.1 | transglycosylase | - |
| C1P77_RS00020 | 5217..6038 | - | 822 | WP_106777884.1 | hypothetical protein | - |
| C1P77_RS00025 | 6427..7182 | + | 756 | WP_001077897.1 | RepB family plasmid replication initiator protein | - |
| C1P77_RS00030 | 7564..8271 | - | 708 | WP_113418526.1 | phage tail protein | - |
| C1P77_RS00035 | 8287..8838 | - | 552 | WP_005031607.1 | hypothetical protein | - |
| C1P77_RS00040 | 8893..9384 | - | 492 | WP_134805658.1 | baseplate protein | - |
| C1P77_RS00045 | 9393..9971 | - | 579 | WP_064198816.1 | hypothetical protein | - |
| C1P77_RS00050 | 10040..10669 | - | 630 | WP_284512723.1 | hypothetical protein | - |
| C1P77_RS00055 | 10790..12448 | - | 1659 | WP_134805657.1 | phage tail protein | - |
| C1P77_RS00060 | 12513..12791 | - | 279 | WP_134800754.1 | Ig-like domain-containing protein | - |
| C1P77_RS00065 | 12935..14632 | - | 1698 | WP_134805656.1 | capsid protein | - |
| C1P77_RS00070 | 14790..15182 | + | 393 | WP_064198771.1 | hypothetical protein | - |
| C1P77_RS00075 | 15219..15677 | + | 459 | WP_064198772.1 | hypothetical protein | - |
| C1P77_RS00080 | 15831..16283 | - | 453 | WP_234353650.1 | hypothetical protein | - |
| C1P77_RS00085 | 16339..17175 | - | 837 | WP_064198774.1 | hypothetical protein | - |
| C1P77_RS00090 | 17175..17459 | - | 285 | WP_064198775.1 | PAAR domain-containing protein | - |
| C1P77_RS00095 | 17724..18680 | + | 957 | WP_064198776.1 | plasmid segregation protein ParM | - |
| C1P77_RS00100 | 18693..19031 | + | 339 | WP_064198777.1 | plasmid partitioning/stability family protein | - |
| C1P77_RS00105 | 19310..19951 | + | 642 | WP_052930745.1 | AAA family ATPase | - |
| C1P77_RS00110 | 19944..20231 | + | 288 | WP_119007043.1 | hypothetical protein | - |
| C1P77_RS00115 | 20375..21193 | - | 819 | Protein_22 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| C1P77_RS00120 | 21273..21923 | - | 651 | WP_064198818.1 | hypothetical protein | - |
| C1P77_RS00125 | 21937..22842 | - | 906 | WP_134805654.1 | recombination-associated protein RdgC | - |
| C1P77_RS00130 | 22907..23533 | - | 627 | WP_134800755.1 | baseplate protein | - |
| C1P77_RS00135 | 23523..24509 | - | 987 | WP_119007047.1 | tail length tape measure protein | - |
| C1P77_RS00140 | 24513..25280 | - | 768 | WP_064198782.1 | hypothetical protein | - |
| C1P77_RS00145 | 25277..26068 | - | 792 | WP_134810117.1 | phage tail protein | - |
| C1P77_RS00150 | 26214..26516 | + | 303 | WP_000691940.1 | type II toxin-antitoxin system HigB family toxin | - |
| C1P77_RS00155 | 26520..26879 | + | 360 | WP_001022417.1 | transcriptional regulator | - |
| C1P77_RS00160 | 26914..28110 | - | 1197 | WP_001112627.1 | hypothetical protein | - |
| C1P77_RS00165 | 28103..28432 | - | 330 | WP_000542383.1 | hypothetical protein | - |
| C1P77_RS00170 | 28764..29417 | - | 654 | WP_106777899.1 | maturation control protein | - |
| C1P77_RS00175 | 29738..30313 | + | 576 | WP_134800758.1 | hypothetical protein | - |
| C1P77_RS26820 | 30357..30785 | + | 429 | WP_284512727.1 | hypothetical protein | - |
| C1P77_RS26825 | 30870..31037 | - | 168 | WP_171763956.1 | hypothetical protein | - |
| C1P77_RS00185 | 31098..31283 | - | 186 | WP_134805653.1 | host cell division inhibitor Icd-like protein | - |
| C1P77_RS00190 | 31525..32130 | - | 606 | WP_134800760.1 | Ref family recombination enhancement nuclease | - |
| C1P77_RS26830 | 32251..32403 | + | 153 | WP_284512728.1 | hypothetical protein | - |
| C1P77_RS00195 | 32403..32696 | + | 294 | WP_284512729.1 | DUF4406 domain-containing protein | - |
| C1P77_RS00200 | 32693..33337 | + | 645 | WP_134800762.1 | hypothetical protein | - |
| C1P77_RS00205 | 33334..33996 | + | 663 | WP_134800763.1 | metallophosphoesterase | - |
| C1P77_RS00210 | 34142..35137 | + | 996 | WP_134800764.1 | DUF968 domain-containing protein | - |
| C1P77_RS00215 | 35182..35655 | + | 474 | WP_134800765.1 | hypothetical protein | - |
| C1P77_RS00220 | 35670..35927 | + | 258 | WP_110021443.1 | DUF4752 family protein | - |
| C1P77_RS00225 | 35924..36118 | + | 195 | WP_134800766.1 | DUF1382 family protein | - |
| C1P77_RS00230 | 36111..36809 | + | 699 | WP_134800767.1 | ead/Ea22-like family protein | - |
| C1P77_RS00235 | 36806..37558 | + | 753 | WP_134800768.1 | ead/Ea22-like family protein | - |
| C1P77_RS00240 | 37560..38177 | + | 618 | WP_134805652.1 | hypothetical protein | - |
| C1P77_RS00245 | 38174..38728 | + | 555 | WP_134800769.1 | DUF551 domain-containing protein | - |
| C1P77_RS00250 | 38721..39002 | + | 282 | WP_134800770.1 | ASCH domain-containing protein | - |
| C1P77_RS00255 | 39026..39319 | + | 294 | WP_134800771.1 | hypothetical protein | - |
| C1P77_RS26835 | 39319..39477 | + | 159 | WP_284512731.1 | hypothetical protein | - |
| C1P77_RS00260 | 39560..39934 | + | 375 | WP_134800772.1 | hypothetical protein | - |
| C1P77_RS00265 | 39916..40569 | + | 654 | WP_134810118.1 | hypothetical protein | - |
| C1P77_RS00275 | 40633..40884 | + | 252 | WP_001283837.1 | DNA polymerase III subunit theta | - |
| C1P77_RS00280 | 41008..41397 | + | 390 | WP_097295905.1 | S24 family peptidase | - |
| C1P77_RS00285 | 41470..41691 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| C1P77_RS00290 | 41691..42071 | + | 381 | WP_032220967.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| C1P77_RS00295 | 42155..42961 | - | 807 | WP_134800773.1 | hypothetical protein | - |
| C1P77_RS00300 | 42968..43408 | - | 441 | WP_134805665.1 | DUF2829 domain-containing protein | - |
| C1P77_RS00305 | 43423..43917 | - | 495 | WP_110021427.1 | dUTP diphosphatase | - |
| C1P77_RS00310 | 43910..44401 | - | 492 | WP_134800774.1 | hypothetical protein | - |
| C1P77_RS00315 | 44398..44742 | - | 345 | WP_004010537.1 | hypothetical protein | - |
| C1P77_RS00320 | 44815..45843 | - | 1029 | WP_134805664.1 | tyrosine-type recombinase/integrase | - |
| C1P77_RS00325 | 46240..47277 | + | 1038 | WP_134805663.1 | phage repressor protein | - |
| C1P77_RS00330 | 47304..48812 | - | 1509 | WP_064198810.1 | hypothetical protein | - |
| C1P77_RS00335 | 48812..50176 | - | 1365 | WP_284512709.1 | DNA pacase A subunit | - |
| C1P77_RS00340 | 50173..50565 | - | 393 | WP_064198811.1 | hypothetical protein | - |
| C1P77_RS26840 | 50677..51069 | - | 393 | WP_198665587.1 | hypothetical protein | - |
| C1P77_RS00350 | 51069..51644 | - | 576 | WP_064198813.1 | DUF2829 domain-containing protein | - |
| C1P77_RS00360 | 52360..52491 | - | 132 | WP_134800778.1 | DUF3927 family protein | - |
| C1P77_RS00375 | 54636..55847 | - | 1212 | WP_064198747.1 | hypothetical protein | - |
| C1P77_RS00380 | 55963..56202 | - | 240 | WP_119007078.1 | hypothetical protein | - |
| C1P77_RS26845 | 56479..56952 | - | 474 | WP_225893780.1 | VRR-NUC domain-containing protein | - |
| C1P77_RS00395 | 57112..57372 | - | 261 | WP_106777917.1 | hypothetical protein | - |
| C1P77_RS00400 | 57375..57809 | - | 435 | WP_064198750.1 | hypothetical protein | - |
| C1P77_RS00405 | 57846..64688 | - | 6843 | WP_134806030.1 | SNF2-related protein | - |
| C1P77_RS00410 | 64899..65384 | + | 486 | WP_089567207.1 | TIGR02594 family protein | - |
| C1P77_RS26850 | 65442..65807 | - | 366 | WP_284512714.1 | replication protein RepL | - |
| C1P77_RS26855 | 65879..66403 | - | 525 | WP_284512715.1 | lytic replication protein | - |
| C1P77_RS00420 | 66650..67645 | - | 996 | WP_064198755.1 | hypothetical protein | - |
| C1P77_RS00425 | 67659..69341 | - | 1683 | WP_106777920.1 | phage portal protein | - |
| C1P77_RS00430 | 69413..70774 | - | 1362 | WP_134800748.1 | hypothetical protein | - |
| C1P77_RS00435 | 70868..71236 | - | 369 | WP_021551757.1 | hypothetical protein | - |
| C1P77_RS00440 | 71236..73179 | - | 1944 | WP_134805662.1 | head protein | - |
| C1P77_RS00445 | 73176..73793 | - | 618 | WP_052896578.1 | hypothetical protein | - |
| C1P77_RS00450 | 73783..74232 | - | 450 | WP_052896577.1 | hypothetical protein | - |
| C1P77_RS00455 | 74225..74548 | - | 324 | WP_052896575.1 | holin | - |
| C1P77_RS00460 | 74657..75217 | + | 561 | WP_119007091.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| C1P77_RS00465 | 75148..75732 | + | 585 | WP_284512732.1 | phage tail protein | - |
| C1P77_RS00470 | 75732..76334 | + | 603 | WP_134805661.1 | tail fiber assembly protein | - |
| C1P77_RS00475 | 76306..76746 | - | 441 | WP_058799293.1 | tail fiber assembly protein | - |
| C1P77_RS00480 | 76841..78319 | - | 1479 | WP_284512719.1 | tail fiber protein | - |
| C1P77_RS26860 | 78322..78768 | - | 447 | WP_000829713.1 | hypothetical protein | - |
| C1P77_RS00490 | 78862..79707 | - | 846 | WP_134800750.1 | phage tail protein | - |
| C1P77_RS26865 | 79718..80005 | - | 288 | WP_284512720.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|