MGE detailed information
MGE type: IScluster/Tn MGE length: 35681 bp
Accession: NZ_CP026817 Location: 160332..196012 Organism: Shigella dysenteriae strain 93-119 Replicon: plasmid unnamed2
Accession: NZ_CP026817 Location: 160332..196012 Organism: Shigella dysenteriae strain 93-119 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P76_RS26890 | 157077..157304 | + | 228 | WP_000450530.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| C1P76_RS26895 | 157304..157702 | + | 399 | WP_000911318.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| C1P76_RS26900 | 157711..159890 | - | 2180 | Protein_192 | type IV conjugative transfer system coupling protein TraD | - |
| C1P76_RS26905 | 160138..160835 | + | 698 | WP_094096780.1 | IS1 family transposase IS1X2 | Transposase |
| C1P76_RS26910 | 160851..161522 | + | 672 | Protein_194 | IS630 family transposase IS630 | Transposase |
| C1P76_RS26915 | 161676..162620 | - | 945 | WP_005027201.1 | Lipid A biosynthesis myristoyltransferase 2 | VF |
| C1P76_RS26920 | 162685..163635 | - | 951 | WP_005045525.1 | virulence factor VirK | - |
| C1P76_RS26925 | 163640..164728 | - | 1089 | WP_005027207.1 | putative hexosyltransferase CapU | - |
| C1P76_RS26930 | 164731..165573 | - | 843 | WP_000931198.1 | polysaccharide deacetylase family protein | - |
| C1P76_RS28250 | 166056..166208 | + | 153 | Protein_199 | hypothetical protein | - |
| C1P76_RS26940 | 166260..166956 | + | 697 | Protein_200 | IS1 family transposase IS1X2 | Transposase |
| C1P76_RS26945 | 166974..167456 | - | 483 | Protein_201 | Protein kinase OspG | VF |
| C1P76_RS28255 | 167539..167708 | - | 170 | Protein_202 | type II toxin-antitoxin system toxin YacB | - |
| C1P76_RS26955 | 167708..167977 | - | 270 | WP_000079956.1 | type II toxin-antitoxin system antitoxin YacA | - |
| C1P76_RS26960 | 168185..169822 | - | 1638 | WP_000936802.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| C1P76_RS26965 | 170084..170191 | - | 108 | WP_023592908.1 | transposase domain-containing protein | - |
| C1P76_RS26970 | 170215..170520 | - | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C1P76_RS26975 | 170522..170740 | - | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C1P76_RS26980 | 170983..172211 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| C1P76_RS26990 | 172668..172940 | + | 273 | WP_000019158.1 | hypothetical protein | - |
| C1P76_RS27000 | 174230..174391 | - | 162 | Protein_211 | IS110 family transposase ISEc11 | Transposase |
| C1P76_RS27005 | 174563..174703 | - | 141 | Protein_212 | IS66 family transposase ISSfl3 | Transposase |
| C1P76_RS27010 | 174700..175374 | - | 675 | WP_046891833.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P76_RS27020 | 175593..175700 | + | 108 | Protein_214 | ATP-binding protein | - |
| C1P76_RS27030 | 175831..176958 | + | 1128 | WP_001063816.1 | IS110 family transposase ISSso6 | Transposase |
| C1P76_RS27040 | 177251..178843 | - | 1593 | WP_001072392.1 | IS66 family transposase ISEc43 | Transposase |
| C1P76_RS27045 | 178874..179224 | - | 351 | WP_000624671.1 | IS66 family transposase IS682 | Transposase |
| C1P76_RS27050 | 179221..179577 | - | 357 | WP_005041107.1 | IS66 family transposase IS682 | Transposase |
| C1P76_RS28260 | 179729..179830 | + | 102 | Protein_219 | ATP-binding protein | - |
| C1P76_RS27055 | 179912..180121 | - | 210 | Protein_220 | peptidoglycan-binding protein | - |
| C1P76_RS27060 | 180171..180422 | - | 252 | WP_000433928.1 | transporter | - |
| C1P76_RS27070 | 180874..181158 | + | 285 | WP_001178088.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| C1P76_RS27075 | 181158..181433 | + | 276 | WP_000421262.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C1P76_RS28265 | 181565..181702 | - | 138 | WP_000766699.1 | hypothetical protein | - |
| C1P76_RS28270 | 181978..182160 | - | 183 | WP_241547534.1 | plasmid partitioning/stability family protein | - |
| C1P76_RS27085 | 182163..182730 | - | 568 | Protein_226 | plasmid segregation protein ParM | - |
| C1P76_RS27090 | 182738..183829 | + | 1092 | Protein_227 | IS66 family transposase ISEc49 | Transposase |
| C1P76_RS27095 | 184024..185154 | - | 1131 | WP_050546159.1 | IS91 family transposase ISSbo1 | Transposase |
| C1P76_RS27110 | 186561..187729 | + | 1169 | WP_094112608.1 | IS3 family transposase IS911 | Transposase |
| C1P76_RS27115 | 187737..188027 | + | 291 | Protein_231 | group II intron maturase-specific domain-containing protein | - |
| C1P76_RS27120 | 188101..188220 | + | 120 | Protein_232 | transposase domain-containing protein | - |
| C1P76_RS27125 | 188260..188382 | - | 123 | Protein_233 | IS1 family transposase | - |
| C1P76_RS27130 | 188421..189959 | - | 1539 | WP_000099181.1 | IS66 family transposase ISEc22 | Transposase |
| C1P76_RS27135 | 190008..190355 | - | 348 | WP_000612610.1 | IS66 family transposase ISKpn24 | Transposase |
| C1P76_RS27140 | 190352..190732 | - | 381 | WP_001333468.1 | IS66 family transposase ISEc8 | Transposase |
| C1P76_RS27145 | 191087..192214 | - | 1128 | WP_001063816.1 | IS110 family transposase ISSso6 | Transposase |
| C1P76_RS27150 | 192345..192503 | - | 159 | Protein_238 | IS1 family transposase | - |
| C1P76_RS27160 | 192676..192846 | + | 171 | Protein_239 | transposase | - |
| C1P76_RS27165 | 192857..194509 | - | 1653 | WP_046891837.1 | bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA | - |
| C1P76_RS27175 | 196235..196553 | - | 319 | Protein_242 | fimbria/pilus outer membrane usher protein | - |
| C1P76_RS27180 | 196697..200004 | - | 3308 | Protein_243 | outer membrane autotransporter IcsA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|