MGE detailed information
MGE type: Prophage MGE length: 62272 bp
Accession: NZ_CP026815 Location: 1962245..2024516 Organism: Shigella dysenteriae strain 93-119 Replicon: chromosome
Accession: NZ_CP026815 Location: 1962245..2024516 Organism: Shigella dysenteriae strain 93-119 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P76_RS10275 () | 1958389..1960200 | + | 1812 | WP_001069475.1 | phosphogluconate dehydratase | - |
| C1P76_RS10280 () | 1960237..1960878 | + | 642 | WP_000800510.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| C1P76_RS10285 () | 1960934..1962112 | - | 1179 | WP_000173486.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| C1P76_RS10290 () | 1962245..1962539 | + | 295 | Protein_1990 | DNA damage-inducible protein YebG | - |
| C1P76_RS10295 () | 1962606..1962962 | + | 357 | WP_001295500.1 | protein YebF | - |
| C1P76_RS10305 () | 1964066..1964725 | + | 660 | WP_000024738.1 | tellurite resistance TerB family protein | - |
| C1P76_RS10310 () | 1964935..1966995 | + | 2061 | WP_000936901.1 | oligopeptidase B | - |
| C1P76_RS10315 () | 1966992..1967654 | - | 663 | WP_000944260.1 | exodeoxyribonuclease X | - |
| C1P76_RS10320 () | 1967678..1968334 | - | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein YobB | - |
| C1P76_RS10325 () | 1968436..1968666 | - | 231 | WP_000916761.1 | DNA polymerase III subunit theta | - |
| C1P76_RS10330 () | 1968805..1969179 | + | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| C1P76_RS10340 () | 1970570..1971390 | + | 821 | Protein_2000 | copper homeostasis membrane protein CopD | - |
| C1P76_RS10345 () | 1971403..1971744 | + | 342 | WP_000976476.1 | YebY family protein | - |
| - | 1971772..1972006 | - | 235 | - | - | Antitoxin Detail |
| - | 1971902..1972005 | + | 104 | - | - | Toxin Detail |
| C1P76_RS10350 () | 1972137..1972664 | - | 528 | Protein_2002 | hypothetical protein ; Integrase | Integrase |
| C1P76_RS10355 () | 1972730..1973886 | + | 1157 | WP_094096479.1 | IS3 family transposase IS600 | Transposase |
| C1P76_RS10360 () | 1973929..1974370 | - | 442 | Protein_2004 | integrase | - |
| C1P76_RS10365 () | 1974442..1975610 | + | 1169 | WP_094112582.1 | IS3 family transposase ISLad1 | Transposase |
| C1P76_RS10370 () | 1975619..1975968 | - | 350 | Protein_2006 | IS3 family transposase ISSd1 | Transposase |
| C1P76_RS10375 () | 1976112..1977239 | + | 1128 | WP_001063816.1 | IS110 family transposase ISSso6 | Transposase |
| C1P76_RS10380 () | 1977594..1977974 | + | 381 | WP_001333468.1 | IS66 family transposase ISEc8 | Transposase |
| C1P76_RS10385 () | 1977971..1978318 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| C1P76_RS10390 () | 1978367..1979905 | + | 1539 | WP_046891813.1 | IS66 family transposase ISEc22 | Transposase |
| C1P76_RS10395 () | 1980062..1980358 | - | 297 | WP_001277359.1 | host-nuclease inhibitor Gam family protein | - |
| C1P76_RS10400 () | 1980336..1982276 | - | 1941 | WP_005029490.1 | exodeoxyribonuclease VIII | - |
| C1P76_RS10405 () | 1982376..1982651 | - | 276 | Protein_2013 | hypothetical protein | - |
| C1P76_RS10410 () | 1982926..1984053 | + | 1128 | WP_001063816.1 | IS110 family transposase ISSso6 | Transposase |
| C1P76_RS10415 () | 1984287..1985500 | + | 1214 | WP_284513919.1 | IS3 family transposase IS629 | Transposase |
| C1P76_RS10420 () | 1985721..1986101 | + | 381 | WP_001171522.1 | IS66 family transposase ISEc8 | Transposase |
| C1P76_RS10425 () | 1986098..1986445 | + | 348 | WP_000612610.1 | IS66 family transposase ISKpn24 | Transposase |
| C1P76_RS10430 () | 1986494..1987249 | + | 756 | Protein_2018 | IS66 family transposase ISEc22 | Transposase |
| C1P76_RS10435 () | 1987379..1988506 | + | 1128 | WP_001063816.1 | IS110 family transposase ISSso6 | Transposase |
| C1P76_RS10440 () | 1988918..1989274 | + | 357 | WP_284513918.1 | IS66 family transposase IS682 | Transposase |
| C1P76_RS10445 () | 1989359..1990896 | - | 1538 | Protein_2021 | IS66 family transposase ISEc22 | Transposase |
| C1P76_RS10450 () | 1990945..1991292 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| C1P76_RS10455 () | 1991289..1991669 | - | 381 | WP_001333468.1 | IS66 family transposase ISEc8 | Transposase |
| C1P76_RS10460 () | 1991763..1992969 | + | 1207 | Protein_2024 | prophage tail fiber N-terminal domain-containing protein | - |
| C1P76_RS10465 () | 1992920..1993543 | + | 624 | WP_032335698.1 | DUF4376 domain-containing protein | - |
| C1P76_RS10470 () | 1993722..1995428 | - | 1707 | WP_024259619.1 | E3 ubiquitin-protein ligase ipaH3 | VF |
| C1P76_RS10480 () | 1996180..1996407 | + | 228 | Protein_2027 | metallophosphoesterase | - |
| C1P76_RS10485 () | 1996461..1997674 | + | 1214 | WP_134806767.1 | IS3 family transposase IS629 | Transposase |
| C1P76_RS10490 () | 1997714..1998148 | + | 435 | Protein_2029 | serine/threonine-protein phosphatase | - |
| C1P76_RS10495 () | 1998149..1998340 | - | 192 | WP_000457842.1 | YebW family protein | - |
| C1P76_RS10500 () | 1998445..1998681 | - | 237 | WP_001295499.1 | YebV family protein | - |
| C1P76_RS10505 () | 1998799..2000238 | - | 1440 | WP_005024823.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| C1P76_RS10510 () | 2000318..2002950 | - | 2633 | Protein_2033 | hypothetical protein | VF |
| C1P76_RS10515 () | 2002919..2004201 | - | 1283 | Protein_2034 | membrane integrity lipid transport subunit YebS | - |
| C1P76_RS10520 () | 2004331..2004828 | + | 498 | WP_001043888.1 | L-methionine (R)-S-oxide reductase | - |
| C1P76_RS10525 () | 2004925..2005623 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| C1P76_RS10530 () | 2005643..2007691 | + | 2049 | WP_024259617.1 | carboxy terminal-processing peptidase | - |
| C1P76_RS10535 () | 2007883..2008764 | + | 882 | WP_000984517.1 | protease HtpX | - |
| C1P76_RS10540 () | 2008810..2010183 | - | 1374 | WP_001127216.1 | MFS transporter | - |
| C1P76_RS10545 () | 2010360..2011151 | + | 792 | WP_001262182.1 | DNA-binding transcriptional regulator KdgR | - |
| C1P76_RS10550 () | 2011294..2011533 | - | 240 | WP_001211011.1 | YobH family protein | - |
| C1P76_RS10555 () | 2011692..2011835 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| C1P76_RS10560 () | 2011910..2012197 | + | 288 | WP_001006852.1 | YebO family protein | - |
| C1P76_RS10565 () | 2012538..2013235 | + | 698 | WP_094106546.1 | IS1 family transposase IS1X2 | Transposase |
| C1P76_RS10570 () | 2013523..2013666 | + | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| C1P76_RS10575 () | 2013679..2013888 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| C1P76_RS10580 () | 2014054..2014863 | + | 810 | WP_000010113.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| C1P76_RS10585 () | 2014860..2015426 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| C1P76_RS10590 () | 2015854..2016312 | - | 459 | WP_000156259.1 | DUF986 family protein | - |
| C1P76_RS10595 () | 2016367..2017218 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| C1P76_RS10600 () | 2017231..2018031 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
| C1P76_RS10605 () | 2018094..2019065 | - | 972 | WP_000150543.1 | PTS mannose transporter subunit IIAB | - |
| C1P76_RS28340 () | 2019382..2019540 | + | 159 | WP_001327808.1 | protein YoaL | - |
| C1P76_RS10610 () | 2019528..2021083 | + | 1556 | Protein_2054 | CNNM family cation transport protein YoaE | - |
| C1P76_RS10615 () | 2021210..2021701 | + | 492 | Protein_2055 | IS110-like element ISSso6 family transposase | - |
| C1P76_RS10620 () | 2021682..2022500 | - | 819 | Protein_2056 | putative cyclic di-GMP phosphodiesterase PdeD | VF |
| C1P76_RS10630 () | 2023758..2024516 | - | 759 | Protein_2058 | CSS-motif domain-containing protein | - |
| C1P76_RS10635 () | 2024647..2026011 | - | 1365 | WP_000624300.1 | L-serine ammonia-lyase | - |
| C1P76_RS10640 () | 2026195..2026773 | - | 579 | WP_000456725.1 | CoA pyrophosphatase | - |
| C1P76_RS10645 () | 2026777..2028138 | - | 1362 | WP_000855021.1 | aminodeoxychorismate synthase component 1 | - |
| C1P76_RS10650 () | 2028212..2028391 | + | 180 | WP_000457334.1 | YoaH family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|