MGE detailed information
MGE type: IScluster/Tn MGE length: 35132 bp
Accession: NZ_CP026815 Location: 1722172..1757303 Organism: Shigella dysenteriae strain 93-119 Replicon: chromosome
Accession: NZ_CP026815 Location: 1722172..1757303 Organism: Shigella dysenteriae strain 93-119 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P76_RS08810 () | 1717878..1718813 | + | 936 | WP_000986350.1 | L,D-transpeptidase | - |
| C1P76_RS08820 () | 1719272..1720189 | + | 918 | WP_001011482.1 | nitrogen assimilation transcriptional regulator NAC | - |
| C1P76_RS08825 () | 1720291..1721241 | + | 951 | WP_001010986.1 | HTH-type transcriptional regulator Cbl | - |
| C1P76_RS08835 () | 1721515..1722156 | + | 642 | Protein_1713 | toxic metabolite efflux MATE transporter YeeO | - |
| C1P76_RS08845 () | 1722925..1723776 | + | 852 | Protein_1715 | toxic metabolite efflux MATE transporter YeeO | - |
| C1P76_RS08855 () | 1724403..1724771 | - | 369 | Protein_1716 | putative transcriptional regulatory protein YeeN | VF |
| C1P76_RS08865 () | 1725540..1725896 | - | 357 | Protein_1718 | putative transcriptional regulatory protein YeeN | VF |
| C1P76_RS08870 () | 1726239..1727692 | - | 1454 | Protein_1719 | AMP nucleosidase | - |
| C1P76_RS08875 () | 1727794..1728108 | - | 315 | Protein_1720 | serine transporter | - |
| C1P76_RS08880 () | 1728166..1729134 | - | 969 | WP_168160373.1 | IS5 family transposase IS903B | Transposase |
| C1P76_RS08885 () | 1729168..1730175 | - | 1008 | Protein_1722 | shikimate transporter | - |
| C1P76_RS08890 () | 1730288..1730985 | + | 698 | WP_261949748.1 | IS1 family transposase IS1X2 | Transposase |
| C1P76_RS08895 () | 1731267..1732160 | + | 894 | Protein_1724 | lipopolysaccharide heptosyltransferase family protein | - |
| C1P76_RS08900 () | 1732217..1732914 | + | 698 | WP_248701040.1 | IS1 family transposase IS1X2 | Transposase |
| C1P76_RS08905 () | 1732926..1733096 | + | 171 | Protein_1726 | lipopolysaccharide heptosyltransferase family protein | - |
| C1P76_RS08910 () | 1733358..1735082 | - | 1725 | Protein_1727 | Ig-like domain-containing protein | - |
| C1P76_RS08915 () | 1735125..1736280 | - | 1156 | Protein_1728 | IS3 family transposase ISSd1 | Transposase |
| C1P76_RS08920 () | 1736345..1740925 | - | 4581 | Protein_1729 | Ig-like domain-containing protein | - |
| C1P76_RS08925 () | 1740981..1742194 | + | 1214 | WP_134806767.1 | IS3 family transposase IS629 | Transposase |
| C1P76_RS08930 () | 1742236..1743919 | - | 1684 | Protein_1731 | Invasin | VF |
| C1P76_RS08940 () | 1744409..1745206 | - | 798 | WP_001302302.1 | DgsA anti-repressor MtfA | - |
| C1P76_RS08950 () | 1745417..1746009 | - | 593 | Protein_1733 | hypothetical protein ; Integrase | Integrase |
| C1P76_RS08955 () | 1746050..1746978 | - | 929 | Protein_1734 | IS3 family transposase IS600 | Transposase |
| C1P76_RS08965 () | 1747747..1747983 | - | 237 | Protein_1736 | IS3 family transposase ISSd1 | Transposase |
| C1P76_RS08970 () | 1747999..1748268 | + | 270 | WP_001117462.1 | helix-turn-helix domain-containing protein | - |
| C1P76_RS08975 () | 1748265..1748690 | + | 426 | WP_000693856.1 | toxin YdaT family protein | - |
| C1P76_RS08980 () | 1748762..1749832 | + | 1071 | WP_024259707.1 | hypothetical protein | - |
| C1P76_RS08985 () | 1749873..1750295 | + | 423 | WP_001151146.1 | DUF977 family protein | - |
| C1P76_RS08990 () | 1750292..1750597 | + | 306 | WP_001266147.1 | DUF4406 domain-containing protein | - |
| C1P76_RS08995 () | 1750584..1751039 | + | 456 | WP_000335375.1 | ead/Ea22-like family protein | - |
| C1P76_RS09000 () | 1751089..1752627 | - | 1539 | WP_000099181.1 | IS66 family transposase ISEc22 | Transposase |
| C1P76_RS09005 () | 1752676..1753023 | - | 348 | WP_000612610.1 | IS66 family transposase ISKpn24 | Transposase |
| C1P76_RS09010 () | 1753020..1753400 | - | 381 | WP_001333468.1 | IS66 family transposase ISEc8 | Transposase |
| C1P76_RS09015 () | 1753512..1753928 | + | 417 | WP_005069274.1 | hypothetical protein | - |
| - | 1754510..1754568 | - | 59 | - | - | Antitoxin Detail |
| C1P76_RS09030 () | 1754580..1754735 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| C1P76_RS09040 () | 1754903..1755181 | + | 279 | WP_000929754.1 | hypothetical protein | - |
| C1P76_RS09045 () | 1755183..1755932 | + | 750 | Protein_1749 | hypothetical protein | - |
| C1P76_RS09055 () | 1755982..1756910 | - | 929 | Protein_1750 | IS3 family transposase IS600 | Transposase |
| C1P76_RS27610 () | 1757679..1757747 | + | 69 | Protein_1752 | phage tail protein | - |
| C1P76_RS09065 () | 1757750..1758295 | + | 546 | WP_000902849.1 | tail fiber assembly protein | - |
| C1P76_RS09070 () | 1758319..1759587 | + | 1269 | Protein_1754 | prophage tail fiber N-terminal domain-containing protein | - |
| C1P76_RS09075 () | 1759538..1760161 | + | 624 | WP_000551126.1 | DUF4376 domain-containing protein | - |
| C1P76_RS09085 () | 1760341..1761984 | - | 1644 | WP_046891740.1 | NEL-type E3 ubiquitin ligase domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|