MGE detailed information
MGE type: Genomic_island MGE length: 10985 bp
Accession: NZ_CP026814 Location: 4336204..4347188 Organism: Shigella boydii strain 83-578 Replicon: chromosome
Accession: NZ_CP026814 Location: 4336204..4347188 Organism: Shigella boydii strain 83-578 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P60_RS23665 () | 4331401..4334034 | + | 2634 | WP_024258614.1 | lipid-binding membrane homeostasis protein YebT | - |
| C1P60_RS23670 () | 4334114..4335553 | + | 1440 | WP_024258615.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| C1P60_RS23675 () | 4335671..4335907 | + | 237 | WP_012421427.1 | DUF1480 family protein | - |
| C1P60_RS23680 () | 4336012..4336203 | + | 192 | WP_000457842.1 | YebW family protein | - |
| C1P60_RS23685 () | 4336204..4336668 | - | 465 | Protein_4327 | serine/threonine-protein phosphatase | - |
| C1P60_RS23690 () | 4336735..4337011 | + | 277 | Protein_4328 | IS3 family transposase ISSd1 | Transposase |
| C1P60_RS23695 () | 4337141..4338268 | + | 1128 | WP_001063816.1 | IS110 family transposase ISSso6 | Transposase |
| C1P60_RS23700 () | 4338623..4339003 | + | 381 | WP_001333468.1 | IS66 family transposase ISEc8 | Transposase |
| C1P60_RS23705 () | 4339000..4339347 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| C1P60_RS23710 () | 4339396..4340933 | + | 1538 | Protein_4332 | IS66 family transposase ISEc22 | Transposase |
| C1P60_RS25420 () | 4341055..4341234 | + | 180 | WP_001039895.1 | hypothetical protein | - |
| C1P60_RS23720 () | 4341235..4342941 | - | 1707 | WP_000936820.1 | E3 ubiquitin-protein ligase ipaH3 | VF |
| C1P60_RS23730 () | 4343489..4344186 | + | 698 | Protein_4335 | IS1 family transposase IS1R | Transposase |
| C1P60_RS23735 () | 4344469..4344666 | + | 198 | Protein_4336 | metallophosphoesterase | - |
| C1P60_RS23745 () | 4345927..4346454 | + | 528 | Protein_4338 | hypothetical protein ; Integrase | Integrase |
| - () | 4346585..4346819 | + | 235 | - | - | Antitoxin Detail |
| - () | 4346586..4346689 | - | 104 | - | - | Toxin Detail |
| C1P60_RS23750 () | 4346847..4347188 | - | 342 | WP_000976477.1 | YebY family protein | - |
| C1P60_RS23755 () | 4347201..4348073 | - | 873 | WP_000879299.1 | copper homeostasis membrane protein CopD | - |
| C1P60_RS23760 () | 4348077..4348451 | - | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| C1P60_RS23765 () | 4348590..4348820 | + | 231 | WP_000916761.1 | DNA polymerase III subunit theta | - |
| C1P60_RS23770 () | 4348922..4349578 | + | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein | - |
| C1P60_RS23775 () | 4349602..4350264 | + | 663 | WP_000944259.1 | exodeoxyribonuclease X | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|