MGE detailed information
MGE type: IScluster/Tn MGE length: 19120 bp
Accession: NZ_CP026814 Location: 3495556..3514675 Organism: Shigella boydii strain 83-578 Replicon: chromosome
Accession: NZ_CP026814 Location: 3495556..3514675 Organism: Shigella boydii strain 83-578 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P60_RS18990 () | 3491602..3492191 | + | 590 | Protein_3422 | Ail/Lom family outer membrane beta-barrel protein | - |
| C1P60_RS18995 () | 3492256..3493491 | + | 1236 | WP_000216459.1 | prophage tail fiber N-terminal domain-containing protein | - |
| C1P60_RS19000 () | 3493577..3494089 | + | 513 | WP_000539253.1 | receptor recognizing protein Gp38 | - |
| C1P60_RS19005 () | 3494165..3494377 | + | 213 | WP_001114260.1 | DUF4376 domain-containing protein | - |
| C1P60_RS19010 () | 3494519..3494843 | - | 325 | Protein_3426 | YkgJ family cysteine cluster protein | - |
| C1P60_RS19020 () | 3494979..3495227 | - | 249 | WP_001217553.1 | DinI-like family protein | - |
| C1P60_RS19025 () | 3495324..3495500 | + | 177 | WP_000530012.1 | hypothetical protein | - |
| C1P60_RS19030 () | 3495556..3496253 | - | 698 | Protein_3429 | IS1 family transposase IS1R | Transposase |
| C1P60_RS19035 () | 3496358..3496705 | - | 348 | Protein_3430 | hydrolase | - |
| C1P60_RS19040 () | 3496732..3497928 | - | 1197 | WP_000140459.1 | IS110 family transposase ISEc20 | Transposase |
| C1P60_RS19045 () | 3498120..3498374 | - | 255 | WP_000891627.1 | isochorismatase family protein | - |
| C1P60_RS19050 () | 3498684..3500456 | + | 1773 | WP_001258662.1 | aspartate--tRNA ligase | - |
| C1P60_RS19055 () | 3500574..3501026 | + | 453 | WP_001300367.1 | dihydroneopterin triphosphate diphosphatase | - |
| C1P60_RS19060 () | 3501055..3501795 | + | 741 | WP_000907247.1 | putative transcriptional regulatory protein YebC | VF |
| C1P60_RS19065 () | 3501830..3502351 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| C1P60_RS25160 () | 3502353..3502505 | - | 153 | WP_005117602.1 | hypothetical protein | - |
| C1P60_RS19070 () | 3502507..3502608 | - | 102 | Protein_3438 | IS1 family transposase | - |
| C1P60_RS19080 () | 3502740..3503867 | + | 1128 | WP_001063816.1 | IS110 family transposase ISSso6 | Transposase |
| C1P60_RS19085 () | 3504217..3504636 | + | 420 | WP_000435414.1 | IS66 family transposase IS682 | Transposase |
| C1P60_RS19090 () | 3504633..3504983 | + | 351 | WP_000623347.1 | IS66 family transposase IS682 | Transposase |
| C1P60_RS19095 () | 3505014..3506606 | + | 1593 | WP_001072381.1 | IS66 family transposase ISEc43 | Transposase |
| C1P60_RS19105 () | 3506899..3508026 | - | 1128 | WP_001063816.1 | IS110 family transposase ISSso6 | Transposase |
| C1P60_RS19110 () | 3508158..3508457 | - | 300 | Protein_3444 | IS1 family transposase IS1X2 | Transposase |
| C1P60_RS19120 () | 3509770..3510600 | + | 831 | WP_039059216.1 | DUF945 domain-containing protein | - |
| C1P60_RS19125 () | 3510682..3511161 | + | 480 | WP_000860059.1 | antirestriction protein | - |
| C1P60_RS19130 () | 3511177..3511653 | + | 477 | WP_012421636.1 | RadC family protein | - |
| C1P60_RS19135 () | 3511716..3511937 | + | 222 | WP_000692323.1 | DUF987 domain-containing protein | - |
| C1P60_RS19140 () | 3512011..3512379 | + | 369 | WP_001285585.1 | type IV toxin-antitoxin system toxin CbtA | Antitoxin Detail |
| C1P60_RS19145 () | 3512468..3512842 | + | 375 | WP_000854814.1 | type IV toxin-antitoxin system toxin CbtA | Toxin Detail |
| C1P60_RS19150 () | 3512839..3513033 | + | 195 | WP_000988600.1 | hypothetical protein | - |
| C1P60_RS25355 () | 3513046..3513159 | + | 114 | WP_001161660.1 | DUF957 domain-containing protein | - |
| C1P60_RS19160 () | 3513548..3514675 | + | 1128 | WP_001063816.1 | IS110 family transposase ISSso6 | Transposase |
| C1P60_RS19165 () | 3514942..3515181 | - | 240 | Protein_3455 | nickel/cobalt efflux protein RcnA | - |
| C1P60_RS19170 () | 3515303..3515575 | + | 273 | WP_000019944.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| C1P60_RS19175 () | 3515798..3516586 | + | 789 | WP_001195636.1 | hydroxyethylthiazole kinase | - |
| C1P60_RS19180 () | 3516583..3517383 | + | 801 | WP_000822274.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| C1P60_RS19185 () | 3517448..3518266 | + | 819 | WP_005031483.1 | glycoside hydrolase family 25 protein | - |
| C1P60_RS19190 () | 3518318..3519064 | + | 747 | WP_039080486.1 | GntR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|