MGE detailed information
MGE type: IScluster/Tn MGE length: 12975 bp
Accession: NZ_CP026814 Location: 3414206..3427180 Organism: Shigella boydii strain 83-578 Replicon: chromosome
Accession: NZ_CP026814 Location: 3414206..3427180 Organism: Shigella boydii strain 83-578 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P60_RS18455 () | 3412499..3413296 | - | 798 | WP_001302302.1 | DgsA anti-repressor MtfA | - |
| C1P60_RS18465 () | 3413507..3413962 | - | 456 | WP_114142313.1 | integrase | - |
| C1P60_RS18470 () | 3414012..3414709 | + | 698 | Protein_3327 | IS1 family transposase IS1X2 | Transposase |
| C1P60_RS18475 () | 3414659..3414964 | - | 306 | Protein_3328 | hypothetical protein | - |
| C1P60_RS18480 () | 3415031..3416187 | + | 1157 | WP_134796775.1 | IS3 family transposase IS600 | Transposase |
| C1P60_RS18490 () | 3416231..3416530 | - | 300 | Protein_3330 | DUF968 domain-containing protein | - |
| C1P60_RS18495 () | 3416570..3418107 | - | 1538 | Protein_3331 | IS66 family transposase ISEc22 | Transposase |
| C1P60_RS18500 () | 3418156..3418503 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| C1P60_RS18505 () | 3418500..3418880 | - | 381 | WP_001333468.1 | IS66 family transposase ISEc8 | Transposase |
| C1P60_RS18510 () | 3419235..3420362 | - | 1128 | WP_001063816.1 | IS110 family transposase ISSso6 | Transposase |
| C1P60_RS18515 () | 3420493..3420954 | - | 462 | Protein_3335 | hypothetical protein | - |
| C1P60_RS18520 () | 3420956..3421234 | - | 279 | WP_000929754.1 | hypothetical protein | - |
| C1P60_RS18530 () | 3421402..3421557 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - () | 3421569..3421627 | + | 59 | - | - | Antitoxin Detail |
| C1P60_RS18545 () | 3422209..3422651 | - | 443 | Protein_3338 | hypothetical protein | - |
| C1P60_RS18550 () | 3422695..3423075 | + | 381 | WP_001333468.1 | IS66 family transposase ISEc8 | Transposase |
| C1P60_RS18555 () | 3423072..3423419 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| C1P60_RS18560 () | 3423468..3425006 | + | 1539 | WP_134802545.1 | IS66 family transposase ISEc22 | Transposase |
| C1P60_RS18565 () | 3425003..3425362 | + | 360 | WP_073692993.1 | 3'-5' exoribonuclease | - |
| C1P60_RS18570 () | 3425421..3425624 | + | 204 | WP_000096344.1 | DUF4224 domain-containing protein | - |
| C1P60_RS18575 () | 3425624..3425979 | + | 356 | Protein_3344 | integrase | - |
| C1P60_RS18590 () | 3427420..3428010 | + | 591 | WP_000377820.1 | DUF2313 domain-containing protein | - |
| C1P60_RS25340 () | 3427997..3428664 | + | 668 | Protein_3347 | phage tail protein | - |
| C1P60_RS25345 () | 3428685..3429206 | + | 522 | WP_165850228.1 | hypothetical protein | - |
| C1P60_RS18600 () | 3429209..3429754 | + | 546 | WP_000902895.1 | tail fiber assembly protein | - |
| C1P60_RS18605 () | 3429778..3430832 | + | 1055 | Protein_3350 | prophage tail fiber N-terminal domain-containing protein | - |
| C1P60_RS18610 () | 3430783..3431406 | + | 624 | WP_000930154.1 | DUF4376 domain-containing protein | - |
| C1P60_RS25350 () | 3431406..3431585 | + | 180 | WP_001039895.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|