MGE detailed information
MGE type: IScluster/Tn MGE length: 49056 bp
Accession: NZ_CP026812 Location: 173..49228 Organism: Shigella flexneri strain 64-5500 Replicon: plasmid unnamed
Accession: NZ_CP026812 Location: 173..49228 Organism: Shigella flexneri strain 64-5500 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P83_RS24290 | 1511..1630 | + | 120 | Protein_1 | DUF3440 domain-containing protein | - |
| C1P83_RS24295 | 1880..2746 | + | 867 | WP_001046942.1 | hypothetical protein | VF |
| C1P83_RS24300 | 3076..3816 | + | 741 | WP_000850661.1 | PAP2 family phosphatase PhoN2 | - |
| C1P83_RS26680 | 3889..4011 | + | 123 | WP_000537156.1 | IS3 family transposase IS629 | Transposase |
| C1P83_RS24310 | 4169..4349 | - | 181 | Protein_5 | hypothetical protein | VF |
| C1P83_RS25870 | 5109..6373 | - | 1265 | Protein_7 | type 3 secretion system effector OspC4 | - |
| C1P83_RS24335 | 8100..8618 | - | 519 | Protein_9 | IS66 family transposase IS679 | Transposase |
| C1P83_RS24340 | 8635..9320 | - | 686 | Protein_10 | IS3 family transposase ISSfl11 | Transposase |
| C1P83_RS24345 | 9659..9925 | + | 267 | Protein_11 | hypothetical protein | - |
| C1P83_RS24350 | 10010..11718 | - | 1709 | Protein_12 | hypothetical protein | VF |
| C1P83_RS24355 | 12150..12869 | - | 720 | WP_001121865.1 | Phosphothreonine lyase OspF | VF |
| C1P83_RS24360 | 12994..13557 | - | 564 | Protein_14 | ISL3 family transposase ISKox3 | Transposase |
| C1P83_RS24365 | 13541..13799 | + | 259 | Protein_15 | IS1 family transposase | - |
| C1P83_RS24370 | 13908..14486 | - | 579 | WP_000868560.1 | hypothetical protein | - |
| C1P83_RS26465 | 14535..14793 | - | 259 | Protein_17 | integrase core domain-containing protein | - |
| C1P83_RS24375 | 14907..15144 | - | 238 | Protein_18 | ATP-binding protein | - |
| C1P83_RS24380 | 15331..15760 | - | 430 | Protein_19 | IS91 family transposase ISEc37 | Transposase |
| C1P83_RS25630 | 15808..15993 | - | 186 | WP_005008511.1 | hypothetical protein | - |
| C1P83_RS25875 | 16156..16437 | + | 282 | Protein_21 | IS66 family transposase ISCro1 | Transposase |
| C1P83_RS24395 | 16451..17795 | - | 1345 | Protein_22 | IS4 family transposase IS4 | Transposase |
| C1P83_RS24400 | 17862..18239 | + | 378 | Protein_23 | IS66 family transposase ISCro1 | Transposase |
| C1P83_RS24405 | 18239..18586 | + | 348 | WP_000622995.1 | IS66 family transposase ISCro1 | Transposase |
| C1P83_RS24410 | 18606..19760 | + | 1155 | Protein_25 | IS66 family transposase ISCro1 | Transposase |
| C1P83_RS24415 | 19764..19923 | + | 160 | Protein_26 | IS3 family transposase | - |
| C1P83_RS24420 | 20512..20810 | + | 299 | Protein_27 | IS256 family transposase IS1414 | Transposase |
| C1P83_RS24425 | 20892..21029 | + | 138 | Protein_28 | IS630 family transposase | - |
| C1P83_RS25880 | 21400..22076 | + | 677 | Protein_29 | hypothetical protein | VF |
| C1P83_RS26475 | 22397..22510 | + | 114 | Protein_30 | IS3 family transposase | - |
| C1P83_RS25885 | 22588..22902 | + | 315 | WP_032490754.1 | hypothetical protein | - |
| C1P83_RS24450 | 23184..23750 | + | 567 | WP_005057975.1 | hypothetical protein | VF |
| C1P83_RS26480 | 24012..24134 | - | 123 | Protein_33 | transposase domain-containing protein | - |
| C1P83_RS24460 | 24277..24831 | + | 555 | Protein_34 | IS3 family transposase IS3H | Transposase |
| C1P83_RS24470 | 25948..26308 | + | 361 | Protein_36 | IS1 family transposase | - |
| C1P83_RS24480 | 26395..27403 | + | 1009 | Protein_37 | IS21 family transposase IS100kyp | Transposase |
| C1P83_RS24490 | 27516..28725 | + | 1210 | Protein_38 | IS3 family transposase IS629 | Transposase |
| C1P83_RS24495 | 28709..29491 | + | 783 | WP_011379060.1 | IS21 family transposase IS100kyp | Transposase |
| C1P83_RS24500 | 29558..29896 | + | 339 | Protein_40 | IS1 family transposase | - |
| C1P83_RS26485 | 29910..30044 | + | 135 | Protein_41 | hypothetical protein | - |
| C1P83_RS24510 | 30218..31417 | + | 1200 | WP_000200287.1 | AAA family ATPase | - |
| C1P83_RS24515 | 31417..32397 | + | 981 | WP_000431558.1 | ParB family protein | - |
| C1P83_RS25640 | 32653..32889 | + | 237 | WP_158250172.1 | IS110 family transposase ISAzvi2 | Transposase |
| C1P83_RS24525 | 33024..33380 | + | 357 | WP_004983733.1 | IS66 family transposase IS682 | Transposase |
| C1P83_RS24530 | 33377..33727 | + | 351 | WP_000624671.1 | IS66 family transposase IS682 | Transposase |
| C1P83_RS24535 | 33758..35350 | + | 1593 | WP_001072392.1 | IS66 family transposase ISEc43 | Transposase |
| C1P83_RS24540 | 35386..35652 | + | 267 | WP_241547467.1 | transposase | - |
| C1P83_RS25890 | 35703..35857 | - | 155 | Protein_49 | transposase domain-containing protein | - |
| C1P83_RS24550 | 35940..37037 | - | 1098 | Protein_50 | group II intron reverse transcriptase/maturase | - |
| C1P83_RS26490 | 36989..37144 | + | 156 | Protein_51 | hypothetical protein | - |
| C1P83_RS24555 | 37152..37637 | - | 486 | WP_000501969.1 | GNAT family N-acetyltransferase | Toxin Detail |
| C1P83_RS24560 | 37625..37909 | - | 285 | WP_011114751.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| C1P83_RS24575 | 38582..39750 | + | 1169 | WP_134801051.1 | IS3 family transposase | - |
| C1P83_RS24580 | 39808..40934 | - | 1127 | Protein_55 | IS110 family transposase ISSso6 | Transposase |
| C1P83_RS24585 | 41433..42221 | + | 789 | WP_005116773.1 | AraC family invasion system transcriptional regulator VirF | - |
| C1P83_RS24590 | 42214..42585 | - | 372 | Protein_57 | IS21 family transposase IS100 | Transposase |
| C1P83_RS24595 | 42584..43002 | + | 419 | Protein_58 | transposase | - |
| C1P83_RS24600 | 43076..43452 | + | 377 | Protein_59 | IS3 family transposase IS911 | Transposase |
| C1P83_RS24605 | 43508..44721 | + | 1214 | WP_134810244.1 | IS3 family transposase IS629 | Transposase |
| C1P83_RS25895 | 44800..44919 | - | 120 | Protein_61 | IS66 family transposase ISCro1 | Transposase |
| C1P83_RS24620 | 45036..46733 | - | 1698 | WP_005058548.1 | hypothetical protein | VF |
| C1P83_RS24625 | 46809..46957 | + | 149 | Protein_63 | IS1 family transposase | - |
| C1P83_RS24630 | 47061..48473 | - | 1413 | WP_001026856.1 | hypothetical protein | VF |
| C1P83_RS24635 | 48924..48986 | + | 63 | Protein_65 | IS66 family transposase ISCro1 | Transposase |
| C1P83_RS24640 | 49007..49228 | - | 222 | Protein_66 | IS66 family transposase ISCro1 | Transposase |
| C1P83_RS26495 | 49371..49565 | - | 195 | Protein_67 | HNH endonuclease signature motif containing protein | - |
| C1P83_RS26500 | 49619..49807 | + | 189 | Protein_68 | IS91 family transposase | - |
| C1P83_RS24655 | 50180..51355 | - | 1176 | WP_001020414.1 | enterotoxin production-related protein TieB | - |
| C1P83_RS24665 | 51424..53685 | - | 2262 | WP_001100761.1 | TonB-dependent receptor | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|