MGE detailed information
MGE type: Genomic_island MGE length: 38981 bp
Accession: NZ_CP026811 Location: 1241550..1280530 Organism: Shigella flexneri strain 64-5500 Replicon: chromosome
Accession: NZ_CP026811 Location: 1241550..1280530 Organism: Shigella flexneri strain 64-5500 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P83_RS06665 (1236756) | 1236756..1237016 | - | 261 | WP_000224021.1 | hypothetical protein | - |
| C1P83_RS06670 (1237064) | 1237064..1237273 | - | 210 | WP_128566924.1 | DUF4035 domain-containing protein | - |
| C1P83_RS06675 (1237369) | 1237369..1237743 | - | 375 | WP_000710952.1 | phage tail assembly chaperone | - |
| C1P83_RS06680 (1237758) | 1237758..1238147 | - | 390 | Protein_1303 | major tail subunit | - |
| C1P83_RS06690 (1238918) | 1238918..1239829 | + | 912 | WP_024258032.1 | regulatory protein PocR | - |
| C1P83_RS06695 (1240222) | 1240222..1241389 | - | 1168 | Protein_1306 | IS3 family transposase | - |
| C1P83_RS06700 (1241550) | 1241550..1241987 | + | 438 | WP_000849049.1 | hypothetical protein | - |
| C1P83_RS06705 (1242121) | 1242121..1242665 | + | 545 | Protein_1308 | bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | - |
| C1P83_RS06710 (1242662) | 1242662..1243405 | + | 744 | WP_004983079.1 | adenosylcobinamide-GDP ribazoletransferase | - |
| C1P83_RS06715 (1243417) | 1243417..1244496 | + | 1080 | WP_050902069.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | - |
| C1P83_RS06720 (1244558) | 1244558..1245493 | + | 936 | WP_000986309.1 | L,D-transpeptidase | - |
| C1P83_RS06730 (1245951) | 1245951..1246322 | + | 372 | Protein_1312 | HTH-type transcriptional regulator ArgP | VF |
| C1P83_RS06735 (1246321) | 1246321..1246755 | + | 435 | Protein_1313 | AMP nucleosidase | - |
| C1P83_RS06740 (1247098) | 1247098..1247814 | + | 717 | WP_000532912.1 | transcriptional regulatory protein YeeN | VF |
| C1P83_RS06750 (1248446) | 1248446..1249933 | - | 1488 | WP_077785042.1 | toxic metabolite efflux MATE transporter YeeO | - |
| C1P83_RS06760 (1250331) | 1250331..1251593 | + | 1263 | WP_000055693.1 | hypothetical protein ; Integrase | Integrase |
| C1P83_RS06775 (1252305) | 1252305..1253189 | - | 885 | WP_000511771.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| C1P83_RS25710 (1253748) | 1253748..1253894 | + | 147 | WP_000285696.1 | hypothetical protein | - |
| C1P83_RS06790 (1254054) | 1254054..1254371 | - | 318 | WP_000373726.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| C1P83_RS06795 (1254372) | 1254372..1254629 | - | 258 | WP_000288814.1 | antitoxin | Antitoxin Detail |
| C1P83_RS06805 (1254978) | 1254978..1255184 | - | 207 | WP_000979502.1 | helix-turn-helix transcriptional regulator | - |
| C1P83_RS06810 (1255181) | 1255181..1255642 | - | 462 | WP_000201268.1 | hypothetical protein | - |
| C1P83_RS06815 (1256013) | 1256013..1257617 | - | 1605 | WP_000628841.1 | LA2681 family HEPN domain-containing protein | - |
| C1P83_RS06820 (1257630) | 1257630..1257995 | - | 366 | WP_000253098.1 | hypothetical protein | - |
| C1P83_RS06825 (1258023) | 1258023..1258232 | - | 210 | WP_001044499.1 | hypothetical protein | - |
| C1P83_RS06835 (1259638) | 1259638..1259964 | + | 327 | Protein_1327 | MAPEG family protein | - |
| C1P83_RS06840 (1260005) | 1260005..1260748 | + | 744 | WP_000019618.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| C1P83_RS06845 (1260745) | 1260745..1261716 | + | 972 | WP_000564746.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| C1P83_RS06850 (1261881) | 1261881..1263263 | - | 1383 | Protein_1330 | trimethylamine N-oxide reductase TorZ | - |
| C1P83_RS06855 (1263245) | 1263245..1263460 | - | 216 | Protein_1331 | cytochrome C | - |
| C1P83_RS06865 (1264229) | 1264229..1264852 | - | 624 | Protein_1333 | NapC/NirT family cytochrome c | - |
| C1P83_RS06870 (1265240) | 1265240..1265986 | - | 747 | WP_001185758.1 | copper homeostasis protein CutC | - |
| C1P83_RS06875 (1266000) | 1266000..1266566 | - | 567 | WP_004982864.1 | VOC family protein | - |
| C1P83_RS06880 (1266782) | 1266782..1268515 | + | 1734 | WP_001025342.1 | arginine--tRNA ligase | - |
| C1P83_RS26100 (1268557) | 1268557..1268601 | - | 45 | WP_211180499.1 | protein YecV | - |
| C1P83_RS06885 (1268692) | 1268692..1269180 | + | 489 | WP_004982998.1 | lysozyme inhibitor LprI family protein | - |
| C1P83_RS06890 (1269300) | 1269300..1269692 | - | 393 | WP_001259583.1 | hypothetical protein | VF |
| C1P83_RS06895 (1269692) | 1269692..1271770 | - | 2079 | WP_134800999.1 | hypothetical protein | VF |
| C1P83_RS06900 (1271763) | 1271763..1272866 | - | 1104 | Protein_1341 | hypothetical protein | VF |
| C1P83_RS06905 (1272949) | 1272949..1273593 | - | 645 | WP_000983614.1 | hypothetical protein | VF |
| C1P83_RS06910 (1273604) | 1273604..1273993 | - | 390 | WP_000763866.1 | Sensor histidine kinase RcsC | VF |
| C1P83_RS06915 (1274008) | 1274008..1274946 | - | 939 | WP_000036377.1 | Chemotaxis response regulator protein-glutamate methylesterase | VF |
| C1P83_RS06920 (1274949) | 1274949..1275761 | - | 813 | WP_032324276.1 | hypothetical protein | VF |
| C1P83_RS06925 (1275899) | 1275899..1276465 | - | 567 | WP_001291578.1 | Flagellar transcriptional regulator FlhC | VF |
| C1P83_RS06930 (1276468) | 1276468..1276818 | - | 351 | WP_004982958.1 | Flagellar transcriptional regulator FlhD | VF |
| C1P83_RS06935 (1277596) | 1277596..1278024 | + | 429 | WP_000122426.1 | universal stress protein UspC | - |
| C1P83_RS06940 (1278031) | 1278031..1278579 | - | 549 | Protein_1349 | trehalose-6-phosphate synthase | - |
| C1P83_RS06945 (1278586) | 1278586..1278948 | - | 363 | Protein_1350 | IS3 family transposase ISLad1 | Transposase |
| C1P83_RS06955 (1279719) | 1279719..1280530 | - | 812 | Protein_1352 | IS3 family transposase | - |
| C1P83_RS06960 (1280593) | 1280593..1281473 | - | 881 | Protein_1353 | trehalose-6-phosphate synthase | - |
| C1P83_RS06965 (1281448) | 1281448..1282248 | - | 801 | Protein_1354 | trehalose-phosphatase | - |
| C1P83_RS06970 (1282415) | 1282415..1283401 | - | 987 | WP_000100203.1 | arabinose ABC transporter permease AraH | - |
| C1P83_RS06975 (1283416) | 1283416..1284930 | - | 1515 | WP_134801001.1 | arabinose ABC transporter ATP-binding protein AraG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|