MGE detailed information
MGE type: Prophage MGE length: 74831 bp
Accession: NZ_CP026807 Location: 660176..735006 Organism: Shigella dysenteriae strain 204/96 Replicon: chromosome
Accession: NZ_CP026807 Location: 660176..735006 Organism: Shigella dysenteriae strain 204/96 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P75_RS27465 () | 655669..655827 | - | 159 | WP_001302630.1 | hypothetical protein | - |
| C1P75_RS03330 () | 655754..656920 | + | 1167 | Protein_645 | serine-type D-Ala-D-Ala carboxypeptidase DacD | - |
| C1P75_RS03335 () | 657038..657511 | + | 474 | WP_001105385.1 | DNA gyrase inhibitor SbmC | - |
| C1P75_RS03340 () | 657709..658767 | + | 1059 | WP_001200876.1 | FUSC family protein | - |
| C1P75_RS03345 () | 658939..659268 | + | 330 | WP_000450409.1 | DUF496 family protein | - |
| C1P75_RS03350 () | 659369..659635 | - | 267 | WP_064717141.1 | EutP/PduV family microcompartment system protein | - |
| C1P75_RS03360 () | 659825..660136 | - | 312 | Protein_650 | ATP-binding protein | - |
| C1P75_RS03370 () | 661444..661920 | - | 477 | Protein_652 | IS21 family transposase IS100 | Transposase |
| C1P75_RS03375 () | 661917..662939 | - | 1023 | WP_000255950.1 | IS21 family transposase IS100kyp | Transposase |
| C1P75_RS03390 () | 664725..665422 | + | 698 | WP_284513934.1 | IS1 family transposase IS1R | Transposase |
| C1P75_RS27470 () | 665986..666174 | + | 189 | Protein_656 | IS4 family transposase | - |
| C1P75_RS03400 () | 666153..666326 | + | 174 | Protein_657 | cobalamin biosynthesis protein | - |
| C1P75_RS03405 () | 666478..667023 | + | 546 | WP_000973150.1 | bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | - |
| C1P75_RS03410 () | 667020..667763 | + | 744 | WP_005042779.1 | adenosylcobinamide-GDP ribazoletransferase | - |
| C1P75_RS03415 () | 667775..668854 | + | 1080 | WP_001166156.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | - |
| C1P75_RS03420 () | 668916..669851 | + | 936 | WP_000986350.1 | L,D-transpeptidase | - |
| C1P75_RS03430 () | 670310..671227 | + | 918 | WP_001011482.1 | nitrogen assimilation transcriptional regulator NAC | - |
| C1P75_RS03435 () | 671329..672279 | + | 951 | WP_001010986.1 | HTH-type transcriptional regulator Cbl | - |
| C1P75_RS03445 () | 672553..673194 | + | 642 | Protein_664 | toxic metabolite efflux MATE transporter YeeO | - |
| C1P75_RS03455 () | 673963..674814 | + | 852 | Protein_666 | toxic metabolite efflux MATE transporter YeeO | - |
| C1P75_RS03465 () | 675441..675809 | - | 369 | Protein_667 | DNA topoisomerase 4 subunit A | VF |
| C1P75_RS03475 () | 676578..676934 | - | 357 | Protein_669 | Cell division protein FtsP | VF |
| C1P75_RS03480 () | 677277..678731 | - | 1455 | WP_001060236.1 | AMP nucleosidase | - |
| C1P75_RS03485 () | 678833..679147 | - | 315 | Protein_671 | serine transporter | - |
| C1P75_RS03490 () | 679206..680174 | - | 969 | WP_168160373.1 | IS5 family transposase IS903B | Transposase |
| C1P75_RS03495 () | 680208..681215 | - | 1008 | Protein_673 | shikimate transporter | - |
| C1P75_RS03500 () | 681328..682025 | + | 698 | WP_261949748.1 | IS1 family transposase IS1X2 | Transposase |
| C1P75_RS03505 () | 682307..683200 | + | 894 | Protein_675 | lipopolysaccharide heptosyltransferase family protein | - |
| C1P75_RS03510 () | 683257..683954 | + | 698 | WP_248701040.1 | IS1 family transposase IS1X2 | Transposase |
| C1P75_RS03515 () | 683966..684136 | + | 171 | Protein_677 | lipopolysaccharide heptosyltransferase family protein | - |
| C1P75_RS03520 () | 684398..686122 | - | 1725 | Protein_678 | Ig-like domain-containing protein | - |
| C1P75_RS03530 () | 687386..691966 | - | 4581 | Protein_680 | Ig-like domain-containing protein | - |
| C1P75_RS03535 () | 692022..693235 | + | 1214 | WP_134806767.1 | IS3 family transposase IS629 | Transposase |
| C1P75_RS03540 () | 693277..694960 | - | 1684 | Protein_682 | Disulfide-bond oxidoreductase YghU | VF |
| C1P75_RS03550 () | 695450..696247 | - | 798 | WP_001302302.1 | DgsA anti-repressor MtfA | - |
| C1P75_RS03560 () | 696458..697050 | - | 593 | Protein_684 | 2-aminoadipate transaminase ; Integrase | Integrase |
| C1P75_RS03565 () | 697091..698019 | - | 929 | Protein_685 | IS3 family transposase IS600 | Transposase |
| C1P75_RS03575 () | 698788..699024 | - | 237 | Protein_687 | IS3 family transposase ISSd1 | Transposase |
| C1P75_RS03580 () | 699040..699309 | + | 270 | WP_001117462.1 | helix-turn-helix domain-containing protein | - |
| C1P75_RS03585 () | 699306..699731 | + | 426 | WP_000693856.1 | toxin YdaT family protein | - |
| C1P75_RS03590 () | 699803..700873 | + | 1071 | WP_024259707.1 | hypothetical protein | - |
| C1P75_RS03595 () | 700914..701336 | + | 423 | WP_001151146.1 | DUF977 family protein | - |
| C1P75_RS03600 () | 701333..701638 | + | 306 | WP_001266147.1 | DUF4406 domain-containing protein | - |
| C1P75_RS03605 () | 701625..702080 | + | 456 | WP_000335375.1 | ead/Ea22-like family protein | - |
| C1P75_RS03610 () | 702130..703668 | - | 1539 | WP_000099181.1 | IS66 family transposase ISEc22 | Transposase |
| C1P75_RS03615 () | 703717..704064 | - | 348 | WP_000612610.1 | IS66 family transposase ISKpn24 | Transposase |
| C1P75_RS03620 () | 704061..704441 | - | 381 | WP_001333468.1 | IS66 family transposase ISEc8 | Transposase |
| C1P75_RS03625 () | 704553..704969 | + | 417 | WP_005069274.1 | hypothetical protein | - |
| - | 705551..705609 | - | 59 | - | - | Antitoxin Detail |
| C1P75_RS03640 () | 705621..705776 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| C1P75_RS03650 () | 705944..706222 | + | 279 | WP_000929754.1 | hypothetical protein | - |
| C1P75_RS03655 () | 706224..706973 | + | 750 | Protein_700 | hypothetical protein | - |
| C1P75_RS03665 () | 707023..707951 | - | 929 | Protein_701 | IS3 family transposase IS600 | Transposase |
| C1P75_RS27475 () | 708720..708788 | + | 69 | Protein_703 | phage tail protein | - |
| C1P75_RS03675 () | 708791..709336 | + | 546 | WP_000902849.1 | tail fiber assembly protein | - |
| C1P75_RS03680 () | 709360..710629 | + | 1270 | Protein_705 | prophage tail fiber N-terminal domain-containing protein | - |
| C1P75_RS03685 () | 710580..711203 | + | 624 | WP_000551126.1 | DUF4376 domain-containing protein | - |
| C1P75_RS03695 () | 711383..713026 | - | 1644 | WP_046891740.1 | hypothetical protein | VF |
| C1P75_RS03700 () | 713295..713992 | + | 698 | WP_094106546.1 | IS1 family transposase IS1X2 | Transposase |
| C1P75_RS03705 () | 714118..714786 | - | 669 | WP_000239881.1 | class I SAM-dependent methyltransferase | - |
| C1P75_RS03710 () | 715026..716153 | + | 1128 | WP_001063816.1 | IS110 family transposase ISSso6 | Transposase |
| C1P75_RS03720 () | 716446..718038 | - | 1593 | WP_046891739.1 | IS66 family transposase ISEc43 | Transposase |
| C1P75_RS03725 () | 718069..718419 | - | 351 | WP_000624671.1 | IS66 family transposase ISEc47 | Transposase |
| C1P75_RS03730 () | 718416..718772 | - | 357 | WP_000239757.1 | IS66 family transposase IS682 | Transposase |
| C1P75_RS03735 () | 718898..719146 | + | 249 | Protein_714 | tail fiber assembly protein | - |
| C1P75_RS03750 () | 721375..721782 | - | 408 | Protein_716 | cytochrome b | - |
| C1P75_RS03755 () | 721909..723137 | + | 1229 | WP_167544904.1 | IS3 family transposase IS2 | Transposase |
| C1P75_RS03760 () | 723146..723241 | - | 96 | Protein_718 | cytochrome B | - |
| C1P75_RS03770 () | 724851..725501 | - | 651 | WP_001007759.1 | metal-binding protein ZinT | - |
| C1P75_RS03775 () | 725758..726393 | - | 636 | WP_001241113.1 | protein-methionine-sulfoxide reductase heme-binding subunit MsrQ | - |
| C1P75_RS03780 () | 726394..727398 | - | 1005 | WP_000740102.1 | protein-methionine-sulfoxide reductase catalytic subunit MsrP | - |
| C1P75_RS03785 () | 727507..727920 | - | 414 | WP_000920127.1 | hydroxyisourate hydrolase | - |
| C1P75_RS03790 () | 728053..728724 | + | 672 | WP_001339045.1 | hypothetical protein | VF |
| C1P75_RS03795 () | 728724..730082 | + | 1359 | WP_000826750.1 | two-component system sensor histidine kinase HprS | - |
| C1P75_RS03800 () | 730190..730930 | - | 741 | Protein_726 | protein deglycase HchA | - |
| C1P75_RS03805 () | 730986..731683 | + | 698 | WP_284513934.1 | IS1 family transposase IS1R | Transposase |
| C1P75_RS27480 () | 731699..731818 | - | 120 | Protein_728 | protein deglycase HchA | - |
| C1P75_RS03825 () | 733187..733684 | - | 498 | Protein_730 | porin | - |
| C1P75_RS03830 () | 733778..735006 | + | 1229 | WP_167544908.1 | IS3 family transposase IS2 | Transposase |
| C1P75_RS03835 () | 735018..735596 | - | 579 | Protein_732 | porin | - |
| C1P75_RS03840 () | 736247..736528 | + | 282 | WP_001297704.1 | cell division protein DrpB | - |
| C1P75_RS03845 () | 736568..737263 | + | 696 | WP_000365569.1 | phosphohydrolase | - |
| C1P75_RS03850 () | 737330..738748 | + | 1419 | WP_001157235.1 | DNA-cytosine methyltransferase | - |
| C1P75_RS03855 () | 738729..739199 | + | 471 | WP_000786008.1 | VSPR family DNA mismatch endonuclease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|