MGE detailed information
MGE type: Prophage MGE length: 81703 bp
Accession: NZ_CP026807 Location: 1476333..1558035 Organism: Shigella dysenteriae strain 204/96 Replicon: chromosome
Accession: NZ_CP026807 Location: 1476333..1558035 Organism: Shigella dysenteriae strain 204/96 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P75_RS07965 () | 1472717..1474078 | + | 1362 | WP_000983895.1 | bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF | - |
| C1P75_RS07970 () | 1474090..1475283 | + | 1194 | WP_000209505.1 | tryptophan synthase subunit beta | - |
| C1P75_RS07975 () | 1475283..1476089 | + | 807 | WP_000443080.1 | tryptophan synthase subunit alpha | - |
| C1P75_RS07985 () | 1477141..1477266 | - | 126 | Protein_1553 | OmpW family outer membrane protein | - |
| C1P75_RS27655 () | 1477571..1477717 | - | 147 | WP_001460318.1 | hypothetical protein | - |
| C1P75_RS07990 () | 1477856..1478124 | - | 269 | Protein_1555 | tail fiber assembly protein | - |
| C1P75_RS07995 () | 1478181..1478849 | + | 669 | WP_000240999.1 | class I SAM-dependent methyltransferase | - |
| C1P75_RS08005 () | 1478904..1479476 | - | 573 | WP_001294928.1 | tail fiber assembly protein | - |
| C1P75_RS08010 () | 1479488..1482463 | - | 2976 | WP_032335670.1 | phage tail protein | - |
| C1P75_RS08015 () | 1482528..1483127 | - | 600 | WP_001228225.1 | Multidrug resistance protein MdtB | VF |
| C1P75_RS08020 () | 1483195..1486674 | - | 3480 | WP_000515473.1 | host specificity protein J | - |
| C1P75_RS27660 () | 1486741..1487079 | - | 339 | WP_153933134.1 | hypothetical protein | - |
| C1P75_RS08030 () | 1487152..1487694 | - | 543 | WP_000847633.1 | tail assembly protein | - |
| C1P75_RS08035 () | 1487691..1488434 | - | 744 | WP_000140710.1 | C40 family peptidase | - |
| C1P75_RS08040 () | 1488439..1489137 | - | 699 | WP_001152648.1 | phage minor tail protein L | - |
| C1P75_RS08045 () | 1489137..1489466 | - | 330 | WP_000847332.1 | phage tail protein | - |
| C1P75_RS08050 () | 1489463..1492036 | - | 2574 | WP_046891712.1 | phage tail tape measure protein | - |
| C1P75_RS08055 () | 1492017..1492430 | - | 414 | WP_000533402.1 | phage tail assembly protein T | - |
| C1P75_RS08060 () | 1492457..1492888 | - | 432 | WP_000479095.1 | phage minor tail protein G | - |
| C1P75_RS08065 () | 1492902..1493513 | - | 612 | Protein_1569 | Ig domain-containing protein | - |
| C1P75_RS08070 () | 1493515..1493910 | - | 396 | WP_000683079.1 | phage minor tail U family protein | - |
| C1P75_RS08075 () | 1493907..1494440 | - | 534 | WP_000974980.1 | phage tail protein | - |
| C1P75_RS08080 () | 1494456..1494809 | - | 354 | WP_001204568.1 | head-tail joining protein | - |
| C1P75_RS08085 () | 1494802..1495185 | - | 384 | WP_000201502.1 | DNA-packaging protein FI | - |
| C1P75_RS08090 () | 1495237..1496265 | - | 1029 | WP_000522588.1 | major capsid protein | - |
| C1P75_RS08095 () | 1496323..1496670 | - | 348 | WP_000256833.1 | head decoration protein | - |
| C1P75_RS08100 () | 1496707..1498213 | - | 1507 | Protein_1576 | S49 family peptidase | - |
| C1P75_RS08105 () | 1498203..1499795 | - | 1593 | WP_005046188.1 | phage portal protein | - |
| C1P75_RS08110 () | 1499792..1499998 | - | 207 | WP_000259002.1 | gpW family head-tail joining protein | - |
| C1P75_RS08115 () | 1499982..1501910 | - | 1929 | WP_024259736.1 | phage terminase large subunit family protein | - |
| C1P75_RS08120 () | 1501882..1502430 | - | 549 | WP_000867569.1 | terminase small subunit | - |
| C1P75_RS27665 () | 1502873..1503340 | - | 468 | WP_001082562.1 | lysis protein | - |
| C1P75_RS08130 () | 1503639..1504172 | - | 534 | WP_000992072.1 | lysozyme | - |
| C1P75_RS08135 () | 1504278..1504550 | + | 273 | WP_000369850.1 | hypothetical protein | - |
| C1P75_RS08140 () | 1504516..1504860 | - | 345 | WP_000193262.1 | YdfR family protein | - |
| C1P75_RS08145 () | 1504865..1505080 | - | 216 | WP_000284510.1 | class II holin family protein | - |
| C1P75_RS08155 () | 1506567..1508423 | - | 1857 | WP_000874316.1 | SASA family carbohydrate esterase | - |
| C1P75_RS08160 () | 1508683..1509018 | + | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| C1P75_RS27670 () | 1509089..1509214 | + | 126 | Protein_1589 | hypothetical protein | - |
| C1P75_RS08170 () | 1509767..1509877 | - | 111 | WP_046891796.1 | DUF3927 family protein | - |
| C1P75_RS08185 () | 1510167..1511225 | - | 1059 | WP_000935541.1 | site-specific DNA-methyltransferase | - |
| C1P75_RS08190 () | 1511333..1511573 | - | 241 | Protein_1592 | hypothetical protein | - |
| C1P75_RS08195 () | 1511800..1512621 | - | 822 | WP_069661440.1 | antitermination protein | - |
| C1P75_RS08200 () | 1512618..1512992 | - | 375 | WP_000904094.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C1P75_RS08205 () | 1513005..1514051 | - | 1047 | WP_001265099.1 | DUF968 domain-containing protein | - |
| C1P75_RS08210 () | 1514053..1514331 | - | 279 | WP_032335658.1 | hypothetical protein | - |
| C1P75_RS08215 () | 1514398..1514649 | - | 252 | WP_000980988.1 | protein Rem | - |
| C1P75_RS08220 () | 1514866..1515021 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - | 1515033..1515091 | + | 59 | - | - | Antitoxin Detail |
| C1P75_RS08225 () | 1515313..1515546 | - | 234 | WP_000350274.1 | hypothetical protein | - |
| C1P75_RS08235 () | 1516989..1517156 | - | 168 | WP_000207997.1 | hypothetical protein | - |
| C1P75_RS08240 () | 1517167..1517430 | - | 264 | WP_000224216.1 | hypothetical protein | - |
| C1P75_RS08245 () | 1517432..1517650 | - | 219 | WP_001142588.1 | DUF4014 family protein | - |
| C1P75_RS08250 () | 1517652..1517867 | - | 216 | WP_000510389.1 | hypothetical protein | - |
| C1P75_RS08255 () | 1517868..1518227 | - | 360 | WP_001289986.1 | hypothetical protein | - |
| C1P75_RS27675 () | 1518224..1518400 | - | 177 | WP_000753053.1 | hypothetical protein | - |
| C1P75_RS08260 () | 1518393..1518575 | - | 183 | WP_001224665.1 | hypothetical protein | - |
| C1P75_RS08265 () | 1518671..1519027 | - | 357 | WP_000403782.1 | hypothetical protein | - |
| C1P75_RS08270 () | 1519005..1519466 | - | 462 | WP_001209470.1 | sigma-E factor regulatory protein RseB domain-containing protein | - |
| C1P75_RS08275 () | 1519463..1519759 | - | 297 | WP_001266130.1 | DUF4406 domain-containing protein | - |
| C1P75_RS08280 () | 1519756..1520148 | - | 393 | WP_001141099.1 | DUF977 family protein | - |
| C1P75_RS08285 () | 1520164..1520934 | - | 771 | WP_000450707.1 | DUF1627 domain-containing protein | - |
| C1P75_RS08290 () | 1520968..1521429 | - | 462 | WP_000139457.1 | replication protein P | - |
| C1P75_RS08295 () | 1521422..1522462 | - | 1041 | WP_000020542.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| C1P75_RS08300 () | 1522434..1522985 | - | 552 | WP_000705383.1 | toxin YdaT family protein | - |
| C1P75_RS08305 () | 1522969..1523196 | - | 228 | WP_000476986.1 | Cro/CI family transcriptional regulator | - |
| C1P75_RS08310 () | 1523274..1523681 | + | 408 | WP_001003379.1 | helix-turn-helix domain-containing protein | - |
| C1P75_RS08315 () | 1523871..1524023 | + | 153 | WP_000379596.1 | DUF1391 family protein | - |
| C1P75_RS08320 () | 1524035..1524409 | + | 375 | WP_005031383.1 | hypothetical protein | - |
| C1P75_RS08325 () | 1525041..1525738 | + | 698 | WP_134795416.1 | IS1 family transposase IS1R | Transposase |
| C1P75_RS08330 () | 1525748..1525906 | + | 159 | WP_032335657.1 | cell division inhibition protein DicB | - |
| C1P75_RS08335 () | 1525903..1526091 | + | 189 | WP_000199480.1 | DUF1482 family protein | - |
| C1P75_RS08340 () | 1526187..1528661 | + | 2475 | WP_000048473.1 | exonuclease | - |
| C1P75_RS08345 () | 1528726..1528974 | + | 249 | WP_000113189.1 | excisionase | - |
| C1P75_RS08350 () | 1528952..1530082 | + | 1131 | WP_000113688.1 | Adenosylhomocysteinase ; Integrase | Integrase |
| C1P75_RS08355 () | 1530128..1530766 | - | 639 | WP_000737224.1 | outer membrane protein OmpW | - |
| C1P75_RS08360 () | 1531006..1531095 | + | 90 | Protein_1627 | YkgJ family cysteine cluster protein | - |
| C1P75_RS08365 () | 1531123..1531866 | + | 744 | WP_000028541.1 | YciC family protein | - |
| C1P75_RS08370 () | 1531896..1532435 | + | 540 | WP_000808667.1 | septation protein A | - |
| C1P75_RS08375 () | 1532540..1532938 | + | 399 | WP_000108160.1 | acyl-CoA thioester hydrolase YciA | - |
| C1P75_RS08380 () | 1532978..1533706 | - | 729 | WP_162281807.1 | Inner membrane metabolite transport protein YhjE | VF |
| C1P75_RS08385 () | 1533921..1534217 | + | 297 | WP_000967595.1 | YciI family protein | - |
| C1P75_RS08390 () | 1534517..1535770 | + | 1254 | WP_005031395.1 | voltage-gated potassium channel protein | - |
| C1P75_RS08395 () | 1535825..1535998 | - | 174 | WP_001309467.1 | YciY family protein | - |
| C1P75_RS08400 () | 1536141..1537601 | + | 1461 | WP_000214508.1 | cardiolipin synthase | - |
| C1P75_RS08405 () | 1537636..1537965 | + | 330 | WP_000366959.1 | HI1450 family dsDNA-mimic protein | - |
| C1P75_RS08410 () | 1538018..1539022 | - | 1005 | WP_000994889.1 | Glycine cleavage system transcriptional activator | VF |
| C1P75_RS08415 () | 1539019..1540032 | - | 1014 | WP_000110967.1 | hypothetical protein | VF |
| C1P75_RS08420 () | 1540044..1540952 | - | 909 | WP_000979650.1 | oligopeptide ABC transporter permease OppC | - |
| C1P75_RS08425 () | 1540967..1541887 | - | 921 | WP_000911111.1 | oligopeptide ABC transporter permease OppB | - |
| C1P75_RS08430 () | 1541973..1543604 | - | 1632 | WP_001297114.1 | oligopeptide ABC transporter substrate-binding protein OppA | - |
| C1P75_RS08435 () | 1543888..1544184 | + | 297 | WP_001211517.1 | hypothetical protein | - |
| C1P75_RS08445 () | 1545048..1545707 | - | 660 | Protein_1644 | AIDA-I family autotransporter YfaL | - |
| C1P75_RS08455 () | 1546580..1547227 | - | 648 | WP_000616554.1 | NAAT family transporter YchE | - |
| C1P75_RS27680 () | 1547258..1547311 | - | 54 | WP_211180492.1 | protein YchT | - |
| C1P75_RS08460 () | 1547705..1550380 | + | 2676 | WP_000301691.1 | Transcriptional regulator AcuR | VF |
| C1P75_RS08465 () | 1550504..1551400 | + | 897 | Protein_1649 | IS4 family transposase ISCro3 | Transposase |
| C1P75_RS08470 () | 1551682..1552299 | - | 618 | WP_000250447.1 | thymidine kinase | - |
| C1P75_RS08475 () | 1552895..1553308 | + | 414 | WP_001287378.1 | histone-like nucleoid-structuring protein H-NS | - |
| C1P75_RS08480 () | 1553452..1554360 | - | 909 | WP_000718998.1 | hypothetical protein | VF |
| C1P75_RS08485 () | 1554562..1555575 | - | 1014 | WP_000193454.1 | ATP/GTP phosphatase | VF |
| C1P75_RS08490 () | 1555667..1556572 | - | 906 | WP_005024994.1 | patatin-like phospholipase RssA | - |
| C1P75_RS08495 () | 1556685..1557143 | + | 459 | WP_024259599.1 | YchJ family protein | - |
| C1P75_RS08500 () | 1557193..1558035 | + | 843 | WP_000555840.1 | formyltetrahydrofolate deformylase | - |
| C1P75_RS08520 () | 1558761..1559438 | - | 678 | WP_001160110.1 | respiratory nitrate reductase subunit gamma | - |
| C1P75_RS08525 () | 1559438..1560148 | - | 711 | WP_000571699.1 | nitrate reductase molybdenum cofactor assembly chaperone | - |
| C1P75_RS08530 () | 1560145..1561683 | - | 1539 | WP_000702660.1 | nitrate reductase subunit beta | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|