MGE detailed information
MGE type: IScluster/Tn MGE length: 16542 bp
Accession: NZ_CP026805 Location: 787565..804106 Organism: Shigella dysenteriae strain 2017C-4522 Replicon: chromosome
Accession: NZ_CP026805 Location: 787565..804106 Organism: Shigella dysenteriae strain 2017C-4522 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P73_RS04390 () | 783956..785662 | + | 1707 | WP_024259619.1 | T3SS effector E3 ubiquitin-protein ligase IpaH3 | - |
| C1P73_RS04395 () | 785841..786464 | - | 624 | WP_024259614.1 | DUF4376 domain-containing protein | - |
| C1P73_RS04400 () | 786415..787635 | - | 1221 | Protein_858 | prophage tail fiber N-terminal domain-containing protein | - |
| C1P73_RS04405 () | 787613..788368 | - | 756 | Protein_859 | IS66 family transposase ISEc22 | Transposase |
| C1P73_RS04410 () | 788417..788764 | - | 348 | WP_000612610.1 | IS66 family transposase ISKpn24 | Transposase |
| C1P73_RS04415 () | 788761..789141 | - | 381 | WP_001171522.1 | IS66 family transposase ISEc8 | Transposase |
| C1P73_RS04425 () | 790809..791936 | - | 1128 | WP_001063816.1 | IS110 family transposase ISSso6 | Transposase |
| C1P73_RS04430 () | 792211..792485 | + | 275 | Protein_864 | hypothetical protein | - |
| C1P73_RS04435 () | 792585..794525 | + | 1941 | WP_005029490.1 | exodeoxyribonuclease VIII | - |
| C1P73_RS04440 () | 794503..794799 | + | 297 | WP_001277359.1 | host-nuclease inhibitor Gam family protein | - |
| C1P73_RS04445 () | 794956..796494 | - | 1539 | WP_000099181.1 | IS66 family transposase ISEc22 | Transposase |
| C1P73_RS04450 () | 796543..796890 | - | 348 | WP_046891812.1 | IS66 family transposase ISKpn24 | Transposase |
| C1P73_RS04455 () | 796887..797267 | - | 381 | WP_001333468.1 | IS66 family transposase ISEc8 | Transposase |
| C1P73_RS04460 () | 797373..797722 | + | 350 | Protein_870 | IS3 family transposase ISSd1 | Transposase |
| C1P73_RS04470 () | 798971..799412 | + | 442 | Protein_872 | integrase | - |
| C1P73_RS04480 () | 800677..801204 | + | 528 | Protein_874 | hypothetical protein ; Integrase | Integrase |
| - | 801335..801569 | + | 235 | - | - | Antitoxin Detail |
| - | 801336..801439 | - | 104 | - | - | Toxin Detail |
| C1P73_RS04485 () | 801597..801938 | - | 342 | WP_000976476.1 | YebY family protein | - |
| C1P73_RS04490 () | 801951..802772 | - | 822 | WP_046891729.1 | copper homeostasis membrane protein CopD | - |
| C1P73_RS04495 () | 802878..804106 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| C1P73_RS04500 () | 804163..804537 | - | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| C1P73_RS04505 () | 804676..804906 | + | 231 | WP_000916761.1 | DNA polymerase III subunit theta | - |
| C1P73_RS04510 () | 805008..805664 | + | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein YobB | - |
| C1P73_RS04515 () | 805688..806350 | + | 663 | WP_000944260.1 | exodeoxyribonuclease X | - |
| C1P73_RS04520 () | 806347..808407 | - | 2061 | WP_000936901.1 | oligopeptidase B | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|