MGE detailed information
MGE type: IScluster/Tn MGE length: 26834 bp
Accession: NZ_CP026804 Location: 30441..57274 Organism: Shigella flexneri strain 89-141 Replicon: plasmid unnamed1
Accession: NZ_CP026804 Location: 30441..57274 Organism: Shigella flexneri strain 89-141 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P88_RS23270 | 25982..26218 | + | 237 | WP_000588812.1 | phosphopantetheine-binding protein | - |
| C1P88_RS23275 | 26435..27364 | + | 930 | WP_000227976.1 | virulence regulon transcriptional activator VirB | - |
| C1P88_RS23280 | 28309..29088 | - | 780 | WP_005059304.1 | type III secretion system effector cysteine protease IpaJ | - |
| C1P88_RS25675 | 29285..30094 | - | 810 | Protein_32 | IS110 family transposase | - |
| C1P88_RS23290 | 30441..31445 | + | 1005 | WP_000255971.1 | IS21 family transposase IS100kyp | Transposase |
| C1P88_RS23295 | 31637..32833 | + | 1197 | WP_134799749.1 | IS110 family transposase ISSfl4 | Transposase |
| C1P88_RS25680 | 32883..33716 | - | 834 | Protein_35 | IS21 family transposase ISEc62 | Transposase |
| C1P88_RS25105 | 33699..34040 | - | 342 | Protein_36 | IS21 family transposase ISEc62 | Transposase |
| C1P88_RS23305 | 34155..34958 | - | 804 | Protein_37 | IS3 family transposase ISKpn38 | Transposase |
| C1P88_RS23320 | 36493..37947 | - | 1455 | WP_134799752.1 | hypothetical protein | VF |
| C1P88_RS23325 | 38519..39193 | + | 675 | WP_001088287.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P88_RS23330 | 39190..39537 | + | 348 | WP_000631715.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P88_RS23335 | 39557..41158 | + | 1602 | WP_005067462.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P88_RS25110 | 41412..41576 | - | 165 | WP_044138991.1 | hypothetical protein | - |
| C1P88_RS23360 | 42478..42762 | + | 285 | WP_011114751.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| C1P88_RS23365 | 42750..43235 | + | 486 | WP_000501970.1 | GNAT family N-acetyltransferase | Toxin Detail |
| C1P88_RS23370 | 43286..43983 | + | 698 | WP_223368647.1 | IS1 family transposase IS1X2 | Transposase |
| C1P88_RS23375 | 44185..44505 | - | 321 | Protein_47 | IS4 family transposase ISSfl1 | Transposase |
| C1P88_RS23380 | 44568..45724 | + | 1157 | WP_094184887.1 | IS3 family transposase ISSd1 | Transposase |
| C1P88_RS23385 | 45770..46090 | + | 321 | Protein_49 | ParB/RepB/Spo0J family partition protein | - |
| C1P88_RS23390 | 46318..46710 | + | 393 | Protein_50 | hypothetical protein | - |
| C1P88_RS23395 | 46729..47202 | + | 474 | WP_005038443.1 | AraC family transcriptional regulator | - |
| C1P88_RS23400 | 47291..48156 | + | 866 | WP_086020993.1 | IS5 family transposase ISSfl7 | Transposase |
| C1P88_RS23405 | 48406..48600 | + | 195 | Protein_53 | HNH endonuclease | - |
| C1P88_RS23410 | 48743..48964 | + | 222 | Protein_54 | IS66 family transposase ISCro1 | Transposase |
| C1P88_RS23415 | 48985..49047 | - | 63 | Protein_55 | IS66 family transposase ISCro1 | Transposase |
| C1P88_RS23420 | 49497..50909 | + | 1413 | WP_134799753.1 | hypothetical protein | VF |
| C1P88_RS23425 | 51013..51162 | - | 150 | Protein_57 | IS1 family transposase | - |
| C1P88_RS23430 | 51238..52935 | + | 1698 | WP_001343187.1 | hypothetical protein | VF |
| C1P88_RS23440 | 53052..53171 | + | 120 | Protein_59 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P88_RS23450 | 53338..53610 | + | 273 | WP_000019164.1 | hypothetical protein | - |
| C1P88_RS23455 | 53591..54799 | + | 1209 | WP_134799754.1 | IS91 family transposase ISSbo1 | Transposase |
| C1P88_RS23460 | 55175..55909 | - | 735 | Protein_62 | IS21 family transposase IS100kyp | Transposase |
| C1P88_RS23470 | 56066..57274 | - | 1209 | Protein_63 | IS3 family transposase | - |
| C1P88_RS23475 | 57326..59050 | - | 1725 | WP_134799755.1 | T3SS effector E3 ubiquitin-protein ligase IpaH4.5 | - |
| C1P88_RS23480 | 59478..61208 | - | 1731 | WP_134799756.1 | T3SS effector E3 ubiquitin-protein ligase IpaH1.4 | - |
| C1P88_RS23485 | 61596..61862 | - | 267 | WP_000957712.1 | type 3 secretion system effector OspE2 | - |
| C1P88_RS25685 | 61971..62101 | - | 131 | Protein_67 | IS1 family transposase | - |
| C1P88_RS25690 | 62099..62182 | + | 84 | Protein_68 | IS66 family insertion sequence element accessory protein TnpB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|