MGE detailed information
MGE type: IScluster/Tn MGE length: 4607 bp
Accession: NZ_CP026803 Location: 1796097..1800703 Organism: Shigella flexneri strain 89-141 Replicon: chromosome
Accession: NZ_CP026803 Location: 1796097..1800703 Organism: Shigella flexneri strain 89-141 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P88_RS24975 (1791113) | 1791113..1791274 | - | 162 | WP_001323614.1 | hypothetical protein | - |
| C1P88_RS09295 (1791274) | 1791274..1791459 | - | 186 | Protein_1780 | DUF1737 domain-containing protein | - |
| C1P88_RS09300 (1791719) | 1791719..1792054 | + | 336 | WP_042774496.1 | anti-adapter protein IraM | - |
| C1P88_RS09305 (1792335) | 1792335..1792421 | - | 87 | WP_000115835.1 | DUF3927 family protein | - |
| C1P88_RS09325 (1793363) | 1793363..1794185 | - | 823 | Protein_1783 | antitermination protein | - |
| C1P88_RS09330 (1794200) | 1794200..1794556 | - | 357 | WP_000904111.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C1P88_RS09335 (1794569) | 1794569..1795618 | - | 1050 | WP_001265239.1 | DUF968 domain-containing protein | - |
| C1P88_RS09340 (1795620) | 1795620..1795898 | - | 279 | WP_024258459.1 | hypothetical protein | - |
| C1P88_RS25355 (1795965) | 1795965..1796030 | - | 66 | Protein_1787 | hypothetical protein | - |
| C1P88_RS09350 (1796097) | 1796097..1797265 | + | 1169 | Protein_1788 | IS3 family transposase | - |
| C1P88_RS09355 (1797200) | 1797200..1797469 | - | 270 | WP_000980985.1 | hypothetical protein | - |
| C1P88_RS09360 (1797687) | 1797687..1797842 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| C1P88_RS09365 (1797914) | 1797914..1798201 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| C1P88_RS09370 (1798201) | 1798201..1798440 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| C1P88_RS09375 (1798465) | 1798465..1798749 | + | 285 | WP_072039323.1 | hypothetical protein | - |
| C1P88_RS09385 (1799996) | 1799996..1800181 | - | 186 | Protein_1795 | YdeI family stress tolerance OB fold protein | - |
| C1P88_RS09395 (1801273) | 1801273..1801791 | + | 519 | WP_001024558.1 | 2-oxo-tetronate isomerase | - |
| C1P88_RS09400 (1801836) | 1801836..1803881 | - | 2046 | WP_005068122.1 | peptidyl-dipeptidase Dcp | - |
| C1P88_RS09405 (1804018) | 1804018..1804764 | + | 747 | WP_000636575.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| C1P88_RS09410 (1804853) | 1804853..1805539 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|