MGE detailed information
MGE type: Prophage MGE length: 35612 bp
Accession: NZ_CP026803 Location: 1782897..1818508 Organism: Shigella flexneri strain 89-141 Replicon: chromosome
Accession: NZ_CP026803 Location: 1782897..1818508 Organism: Shigella flexneri strain 89-141 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P88_RS09205 (1778028) | 1778028..1778387 | - | 360 | WP_001191027.1 | DUF4186 domain-containing protein | - |
| C1P88_RS09210 (1778387) | 1778387..1779313 | - | 927 | WP_000257409.1 | glutaminase B | - |
| C1P88_RS09215 (1779377) | 1779377..1780343 | - | 967 | Protein_1764 | aldehyde dehydrogenase family protein | - |
| C1P88_RS09220 (1780417) | 1780417..1781532 | + | 1116 | WP_000258561.1 | putative protein YneK | - |
| C1P88_RS09225 (1781682) | 1781682..1782872 | + | 1191 | WP_000210809.1 | L-arabinose MFS transporter | - |
| C1P88_RS09230 (1782897) | 1782897..1783562 | - | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| C1P88_RS09235 (1783774) | 1783774..1784208 | + | 435 | WP_000843419.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| C1P88_RS09240 (1784228) | 1784228..1784611 | + | 384 | WP_000091199.1 | Multiple antibiotic resistance protein MarA | VF |
| C1P88_RS09245 (1784643) | 1784643..1784861 | + | 219 | WP_000803656.1 | multiple antibiotic resistance protein MarB | - |
| C1P88_RS09250 (1784892) | 1784892..1785791 | - | 900 | WP_000087191.1 | O-acetylserine/cysteine exporter | - |
| C1P88_RS09255 (1786055) | 1786055..1787173 | + | 1119 | WP_000212732.1 | efflux MFS transporter YdeE | - |
| C1P88_RS09260 (1787300) | 1787300..1787395 | + | 96 | WP_000901367.1 | protein MgtS | - |
| C1P88_RS25350 (1787395) | 1787395..1787499 | + | 105 | WP_211180496.1 | protein MgtT | - |
| C1P88_RS09270 (1788815) | 1788815..1789003 | - | 189 | Protein_1776 | ISNCY family transposase ISRel10 | Transposase |
| C1P88_RS09285 (1789701) | 1789701..1790857 | + | 1157 | WP_094099483.1 | IS3 family transposase ISSd1 | Transposase |
| C1P88_RS09290 (1790901) | 1790901..1790963 | - | 63 | Protein_1778 | holin | - |
| C1P88_RS24975 (1791113) | 1791113..1791274 | - | 162 | WP_001323614.1 | hypothetical protein | - |
| C1P88_RS09295 (1791274) | 1791274..1791459 | - | 186 | Protein_1780 | DUF1737 domain-containing protein | - |
| C1P88_RS09300 (1791719) | 1791719..1792054 | + | 336 | WP_042774496.1 | anti-adapter protein IraM | - |
| C1P88_RS09305 (1792335) | 1792335..1792421 | - | 87 | WP_000115835.1 | DUF3927 family protein | - |
| C1P88_RS09325 (1793363) | 1793363..1794185 | - | 823 | Protein_1783 | antitermination protein | - |
| C1P88_RS09330 (1794200) | 1794200..1794556 | - | 357 | WP_000904111.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C1P88_RS09335 (1794569) | 1794569..1795618 | - | 1050 | WP_001265239.1 | DUF968 domain-containing protein | - |
| C1P88_RS09340 (1795620) | 1795620..1795898 | - | 279 | WP_024258459.1 | hypothetical protein | - |
| C1P88_RS25355 (1795965) | 1795965..1796030 | - | 66 | Protein_1787 | hypothetical protein | - |
| C1P88_RS09350 (1796097) | 1796097..1797265 | + | 1169 | Protein_1788 | IS3 family transposase | - |
| C1P88_RS09355 (1797200) | 1797200..1797469 | - | 270 | WP_000980985.1 | hypothetical protein | - |
| C1P88_RS09360 (1797687) | 1797687..1797842 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| C1P88_RS09365 (1797914) | 1797914..1798201 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| C1P88_RS09370 (1798201) | 1798201..1798440 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| C1P88_RS09375 (1798465) | 1798465..1798749 | + | 285 | WP_072039323.1 | hypothetical protein | - |
| C1P88_RS09385 (1799996) | 1799996..1800181 | - | 186 | Protein_1795 | YdeI family stress tolerance OB fold protein | - |
| C1P88_RS09395 (1801273) | 1801273..1801791 | + | 519 | WP_001024558.1 | 2-oxo-tetronate isomerase | - |
| C1P88_RS09400 (1801836) | 1801836..1803881 | - | 2046 | WP_005068122.1 | peptidyl-dipeptidase Dcp | - |
| C1P88_RS09405 (1804018) | 1804018..1804764 | + | 747 | WP_000636575.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| C1P88_RS09410 (1804853) | 1804853..1805539 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| C1P88_RS09415 (1805717) | 1805717..1805920 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| C1P88_RS09420 (1805956) | 1805956..1807227 | - | 1272 | Protein_1802 | mannitol dehydrogenase family protein | - |
| C1P88_RS09430 (1807996) | 1807996..1808745 | + | 750 | Protein_1804 | Type 1 fimbrin D-mannose specific adhesin | VF |
| C1P88_RS09435 (1809079) | 1809079..1811358 | + | 2280 | WP_000726665.1 | acid resistance putative oxidoreductase YdeP | - |
| C1P88_RS09440 (1811605) | 1811605..1811802 | + | 198 | WP_000543382.1 | two-component system connector SafA | - |
| C1P88_RS09445 (1811876) | 1811876..1812637 | + | 762 | WP_000060475.1 | acid stress response transcriptional regulator YdeO | - |
| C1P88_RS09450 (1813043) | 1813043..1814107 | + | 1065 | Protein_1808 | sulfatase | - |
| C1P88_RS09460 (1815375) | 1815375..1816532 | + | 1158 | WP_005074472.1 | anaerobic sulfatase maturase | - |
| C1P88_RS09465 (1816498) | 1816498..1816620 | - | 123 | WP_120795387.1 | protein YneP | - |
| C1P88_RS09470 (1816823) | 1816823..1818508 | + | 1686 | WP_000628532.1 | ABC transporter ATP-binding protein/permease | - |
| C1P88_RS09475 (1818546) | 1818546..1820918 | + | 2373 | Protein_1813 | TonB-dependent receptor plug domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|