MGE detailed information
MGE type: IScluster/Tn MGE length: 12911 bp
Accession: NZ_CP026803 Location: 1000513..1013423 Organism: Shigella flexneri strain 89-141 Replicon: chromosome
Accession: NZ_CP026803 Location: 1000513..1013423 Organism: Shigella flexneri strain 89-141 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P88_RS04985 (995703) | 995703..998330 | + | 2628 | WP_001281242.1 | DNA topoisomerase (ATP-hydrolyzing) subunit A | - |
| C1P88_RS04990 (998479) | 998479..1000167 | + | 1689 | WP_000012287.1 | DUF2138 domain-containing protein | - |
| C1P88_RS04995 (1000164) | 1000164..1000500 | + | 337 | Protein_958 | DUF1175 family protein | - |
| C1P88_RS05000 (1000513) | 1000513..1001859 | - | 1347 | WP_005076505.1 | IS4 family transposase IS4 | Transposase |
| C1P88_RS05005 (1001930) | 1001930..1002121 | - | 192 | Protein_960 | site-specific integrase | - |
| C1P88_RS05010 (1002196) | 1002196..1003364 | + | 1169 | WP_000747032.1 | IS3 family transposase ISLad1 | Transposase |
| C1P88_RS05015 (1003372) | 1003372..1003791 | - | 420 | Protein_962 | Rha family transcriptional regulator | - |
| C1P88_RS05020 (1003866) | 1003866..1004552 | - | 687 | WP_000218236.1 | P22AR C-terminal domain-containing protein | - |
| C1P88_RS05025 (1004871) | 1004871..1005200 | + | 330 | WP_024258354.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C1P88_RS05030 (1005190) | 1005190..1005498 | + | 309 | WP_000147081.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| C1P88_RS05035 (1005540) | 1005540..1005716 | - | 177 | WP_001254255.1 | NinE family protein | - |
| C1P88_RS05040 (1005713) | 1005713..1006159 | - | 447 | WP_000811308.1 | recombination protein NinB | - |
| C1P88_RS05045 (1006116) | 1006116..1006412 | - | 297 | WP_000049341.1 | hypothetical protein | - |
| C1P88_RS25270 (1006423) | 1006423..1006518 | - | 96 | Protein_969 | hypothetical protein | - |
| C1P88_RS25275 (1007853) | 1007853..1007966 | + | 114 | Protein_971 | DUF4376 domain-containing protein | - |
| C1P88_RS05065 (1008146) | 1008146..1009909 | - | 1764 | WP_000801167.1 | putative E3 ubiquitin-protein ligase ipaH4.5 | VF |
| C1P88_RS05070 (1010001) | 1010001..1010087 | + | 87 | Protein_973 | transposase | - |
| C1P88_RS05075 (1010097) | 1010097..1010177 | - | 81 | Protein_974 | hypothetical protein | - |
| C1P88_RS05080 (1010388) | 1010388..1010477 | + | 90 | Protein_975 | DUF1175 family protein | - |
| C1P88_RS05085 (1010501) | 1010501..1012189 | + | 1689 | Protein_976 | MG2 domain-containing protein | - |
| C1P88_RS05090 (1012255) | 1012255..1013423 | + | 1169 | WP_000747032.1 | IS3 family transposase ISLad1 | Transposase |
| C1P88_RS05095 (1013420) | 1013420..1014979 | + | 1560 | WP_005075894.1 | alpha-2-macroglobulin family protein | - |
| C1P88_RS24805 (1014976) | 1014976..1015698 | + | 723 | WP_005075892.1 | hypothetical protein | - |
| C1P88_RS05100 (1015699) | 1015699..1017348 | + | 1650 | WP_001104543.1 | YfaQ family protein | - |
| C1P88_RS05105 (1017353) | 1017353..1018129 | + | 777 | WP_001225855.1 | YfaP family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|