MGE detailed information
MGE type: Genomic_island MGE length: 12975 bp
Accession: NZ_CP026802 Location: 2713407..2726381 Organism: Shigella sonnei strain ATCC 29930 Replicon: chromosome
Accession: NZ_CP026802 Location: 2713407..2726381 Organism: Shigella sonnei strain ATCC 29930 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P89_RS14250 (2708565) | 2708565..2709620 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| C1P89_RS14255 (2709691) | 2709691..2710476 | - | 786 | WP_000207568.1 | putative lateral flagellar export/assembly protein LafU | - |
| C1P89_RS14260 (2710448) | 2710448..2712160 | + | 1713 | Protein_2731 | flagellar biosynthesis protein FlhA | - |
| C1P89_RS14265 (2712283) | 2712283..2712780 | - | 498 | WP_000006258.1 | REP-associated tyrosine transposase RayT | - |
| C1P89_RS14270 (2712851) | 2712851..2712979 | - | 129 | Protein_2733 | ISAs1 family transposase | - |
| C1P89_RS14275 (2713034) | 2713034..2713731 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
| C1P89_RS14280 (2714020) | 2714020..2714793 | - | 774 | WP_127148796.1 | Murein DD-endopeptidase MepH | VF |
| C1P89_RS14285 (2714979) | 2714979..2715239 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| C1P89_RS14290 (2715242) | 2715242..2715520 | + | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| C1P89_RS14295 (2715676) | 2715676..2716416 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| C1P89_RS14300 (2716387) | 2716387..2717154 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| C1P89_RS14305 (2717360) | 2717360..2717938 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| C1P89_RS14310 (2718178) | 2718178..2720622 | + | 2445 | WP_000973074.1 | Acyl-coenzyme A dehydrogenase | VF |
| C1P89_RS14315 (2720665) | 2720665..2721111 | - | 447 | WP_005141527.1 | Ivy family C-type lysozyme inhibitor | - |
| C1P89_RS14320 (2721292) | 2721292..2722062 | + | 771 | WP_001118061.1 | 2-oxoglutaramate amidase | - |
| C1P89_RS14325 (2722104) | 2722104..2723240 | - | 1137 | WP_000420787.1 | ISAs1 family transposase ISEc1 | Transposase |
| C1P89_RS14330 (2723709) | 2723709..2724086 | - | 378 | WP_001077737.1 | hypothetical protein | - |
| C1P89_RS14335 (2724086) | 2724086..2724496 | - | 411 | WP_162772774.1 | hypothetical protein | - |
| C1P89_RS14340 (2724534) | 2724534..2725670 | - | 1137 | Protein_2747 | ISAs1 family transposase ISEc1 | Transposase |
| C1P89_RS14345 (2725932) | 2725932..2726381 | - | 450 | WP_005141515.1 | RHS element protein dsORF-h1 | - |
| C1P89_RS14350 (2726393) | 2726393..2730610 | - | 4218 | WP_000508700.1 | RHS element core protein | - |
| C1P89_RS14355 (2730686) | 2730686..2731233 | - | 548 | Protein_2750 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|