MGE detailed information
MGE type: IScluster/Tn MGE length: 42331 bp
Accession: NZ_CP026800 Location: 5038..47368 Organism: Shigella flexneri strain NCTC 9728 Replicon: plasmid unnamed
Accession: NZ_CP026800 Location: 5038..47368 Organism: Shigella flexneri strain NCTC 9728 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P82_RS22945 () | 3135..3323 | + | 189 | WP_000957853.1 | hypothetical protein | - |
| C1P82_RS22950 () | 3333..4532 | + | 1200 | WP_010921680.1 | IS91 family transposase | - |
| C1P82_RS22960 () | 4709..5553 | + | 845 | Protein_3 | IS5 family transposase ISSfl7 | Transposase |
| C1P82_RS22965 () | 5668..6699 | + | 1032 | WP_004998488.1 | IS630 family transposase IS630 | Transposase |
| C1P82_RS22970 () | 6893..7583 | + | 691 | Protein_5 | IS1 family transposase | - |
| C1P82_RS22975 () | 7600..7779 | - | 180 | Protein_6 | transposase | - |
| C1P82_RS22980 () | 8107..9804 | + | 1698 | WP_010921637.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| C1P82_RS22985 () | 10232..11956 | + | 1725 | WP_010921638.1 | putative E3 ubiquitin-protein ligase ipaH4.5 | VF |
| C1P82_RS24395 () | 12008..12414 | + | 407 | Protein_9 | IS3 family transposase IS1203 | Transposase |
| C1P82_RS22990 () | 12412..13410 | + | 999 | Protein_10 | IS3 family transposase IS1203 | Transposase |
| C1P82_RS22995 () | 13460..13669 | + | 210 | Protein_11 | peptidoglycan-binding protein | - |
| C1P82_RS23000 () | 13763..13954 | - | 192 | Protein_12 | IS21 family transposase IS100 | Transposase |
| C1P82_RS23005 () | 13995..14492 | - | 498 | Protein_13 | IS66 family transposase ISEc47 | Transposase |
| C1P82_RS23015 () | 14595..15803 | - | 1209 | Protein_14 | IS3 family transposase | - |
| C1P82_RS23020 () | 15983..16717 | + | 735 | Protein_15 | IS21 family transposase IS100kyp | Transposase |
| C1P82_RS23025 () | 17093..18301 | - | 1209 | WP_134807736.1 | IS91 family transposase | - |
| C1P82_RS23030 () | 18282..18554 | - | 273 | WP_000019158.1 | hypothetical protein | - |
| C1P82_RS23040 () | 18721..18840 | - | 120 | Protein_18 | IS66 family transposase ISCro1 | Transposase |
| C1P82_RS23050 () | 18957..20654 | - | 1698 | WP_010921642.1 | hypothetical protein | VF |
| C1P82_RS23055 () | 20730..20880 | + | 151 | Protein_20 | IS1 family transposase | - |
| C1P82_RS23060 () | 20984..22396 | - | 1413 | WP_134807737.1 | hypothetical protein | VF |
| C1P82_RS23065 () | 22846..22908 | + | 63 | Protein_22 | IS66 family transposase ISCro1 | Transposase |
| C1P82_RS23070 () | 22929..23150 | - | 222 | Protein_23 | IS66 family transposase ISCro1 | Transposase |
| C1P82_RS23075 () | 23293..23462 | - | 170 | Protein_24 | HNH endonuclease | - |
| C1P82_RS23085 () | 24690..25163 | - | 474 | WP_005038443.1 | CFA/I fimbrial subunit D | VF |
| C1P82_RS23090 () | 25151..25579 | - | 429 | WP_010921645.1 | hypothetical protein | - |
| C1P82_RS23095 () | 25807..26445 | - | 639 | WP_000502855.1 | ParB N-terminal domain-containing protein | - |
| C1P82_RS23100 () | 26430..26573 | - | 144 | Protein_29 | DUF3440 domain-containing protein | - |
| C1P82_RS23110 () | 28203..28688 | - | 486 | WP_010921647.1 | GNAT family N-acetyltransferase | Toxin Detail |
| C1P82_RS23115 () | 28676..28960 | - | 285 | WP_011114751.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| C1P82_RS24250 () | 29862..30026 | + | 165 | WP_001346193.1 | hypothetical protein | - |
| C1P82_RS23140 () | 30280..31876 | - | 1597 | Protein_34 | IS66 family transposase ISSfl3 | Transposase |
| C1P82_RS23145 () | 31873..32223 | - | 351 | WP_005048975.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P82_RS23150 () | 32220..32894 | - | 675 | WP_004967157.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P82_RS23155 () | 32974..34061 | - | 1088 | Protein_37 | IS3 family transposase IS2 | Transposase |
| C1P82_RS23165 () | 35461..35616 | - | 156 | Protein_39 | IS3 family transposase ISEc48 | Transposase |
| C1P82_RS24255 () | 35731..36369 | - | 639 | WP_010921709.1 | hypothetical protein | VF |
| C1P82_RS23175 () | 36528..36983 | - | 456 | Protein_41 | IS1 family transposase | - |
| C1P82_RS23180 () | 37001..37698 | - | 698 | Protein_42 | IS1 family transposase IS1X2 | Transposase |
| C1P82_RS23185 () | 37758..38708 | + | 951 | Protein_43 | IS66 family transposase ISEc49 | Transposase |
| C1P82_RS23190 () | 39244..39462 | + | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C1P82_RS23195 () | 39464..39769 | + | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C1P82_RS23200 () | 39805..39900 | + | 96 | Protein_46 | transposase domain-containing protein | - |
| C1P82_RS23205 () | 40162..41799 | + | 1638 | WP_000936806.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| C1P82_RS23210 () | 42007..42276 | + | 270 | WP_000079956.1 | hypothetical protein | - |
| C1P82_RS24400 () | 42273..42499 | + | 227 | Protein_49 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C1P82_RS23220 () | 42528..43118 | + | 591 | WP_000705601.1 | Protein kinase OspG | VF |
| C1P82_RS23225 () | 43471..44168 | - | 698 | Protein_51 | IS1 family transposase IS1X2 | Transposase |
| C1P82_RS24260 () | 44233..44517 | + | 285 | Protein_52 | IS66 family transposase ISCro1 | Transposase |
| C1P82_RS23235 () | 44580..45899 | + | 1320 | WP_005061904.1 | IS4 family transposase IS4 | Transposase |
| C1P82_RS23240 () | 45905..47114 | + | 1210 | Protein_54 | IS3 family transposase | - |
| C1P82_RS24265 () | 47249..47440 | - | 192 | Protein_55 | IS66 family transposase ISCro1 | Transposase |
| C1P82_RS23250 () | 47438..47762 | + | 325 | Protein_56 | IS3 family transposase | - |
| C1P82_RS23255 () | 47792..50704 | - | 2913 | WP_010921718.1 | hypothetical protein | - |
| C1P82_RS23260 () | 50707..50823 | + | 117 | WP_004996477.1 | hypothetical protein | - |
| C1P82_RS23265 () | 51187..52029 | + | 843 | WP_000931197.1 | polysaccharide deacetylase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|