MGE detailed information
MGE type: Prophage MGE length: 21420 bp
Accession: NZ_CP026799 Location: 2040717..2062136 Organism: Shigella flexneri strain NCTC 9728 Replicon: chromosome
Accession: NZ_CP026799 Location: 2040717..2062136 Organism: Shigella flexneri strain NCTC 9728 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P82_RS10390 () | 2035799..2036653 | - | 855 | WP_000526465.1 | dimethyl sulfoxide reductase anchor subunit | - |
| C1P82_RS10395 () | 2036655..2037272 | - | 618 | WP_000213020.1 | dimethylsulfoxide reductase subunit B | - |
| C1P82_RS10400 () | 2037283..2039321 | - | 2039 | Protein_1982 | molybdopterin-dependent oxidoreductase | - |
| C1P82_RS10405 () | 2039382..2040491 | - | 1110 | WP_000248656.1 | molybdopterin-dependent oxidoreductase | - |
| C1P82_RS24120 () | 2040474..2041271 | + | 798 | Protein_1984 | integrase | - |
| C1P82_RS10415 () | 2041314..2042523 | - | 1210 | Protein_1985 | IS3 family transposase IS629 | Transposase |
| C1P82_RS10420 () | 2042597..2043271 | - | 675 | WP_134807626.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P82_RS10425 () | 2043434..2043979 | + | 546 | Protein_1987 | hypothetical protein | - |
| C1P82_RS10430 () | 2044044..2045190 | + | 1147 | Protein_1988 | IS3 family transposase IS600 | Transposase |
| C1P82_RS10435 () | 2045187..2045492 | - | 306 | WP_071818640.1 | hypothetical protein | - |
| C1P82_RS10440 () | 2045517..2045756 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| C1P82_RS10445 () | 2045756..2046043 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| C1P82_RS10450 () | 2046115..2046270 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| C1P82_RS10455 () | 2046488..2046739 | + | 252 | WP_000980987.1 | hypothetical protein | - |
| C1P82_RS10460 () | 2046806..2047084 | + | 279 | WP_024258459.1 | hypothetical protein | - |
| C1P82_RS10465 () | 2047086..2048136 | + | 1051 | Protein_1995 | DUF968 domain-containing protein | - |
| C1P82_RS10470 () | 2048149..2048523 | + | 375 | WP_000904117.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C1P82_RS24125 () | 2048520..2049341 | + | 822 | Protein_1997 | antitermination protein | - |
| C1P82_RS10500 () | 2050261..2050369 | + | 109 | Protein_1998 | DUF3927 family protein | - |
| C1P82_RS10505 () | 2050650..2050985 | - | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| C1P82_RS10510 () | 2051245..2051433 | + | 189 | WP_000874243.1 | DUF1737 domain-containing protein | - |
| C1P82_RS24130 () | 2051430..2051591 | + | 162 | WP_001323614.1 | hypothetical protein | - |
| C1P82_RS10515 () | 2051741..2051920 | + | 180 | WP_000372594.1 | class II holin family protein | - |
| C1P82_RS10525 () | 2053163..2054182 | + | 1020 | Protein_2004 | MHS family MFS transporter YdfJ | - |
| C1P82_RS10530 () | 2054271..2055731 | + | 1461 | WP_000527766.1 | mannitol dehydrogenase family protein | - |
| C1P82_RS10535 () | 2055767..2055970 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| C1P82_RS10540 () | 2056148..2056834 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| C1P82_RS10545 () | 2056923..2057669 | - | 747 | WP_005050098.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| C1P82_RS10550 () | 2057806..2059851 | + | 2046 | WP_005068122.1 | peptidyl-dipeptidase Dcp | - |
| C1P82_RS10555 () | 2059896..2060414 | - | 519 | WP_134807628.1 | 2-oxo-tetronate isomerase | - |
| C1P82_RS10560 () | 2060690..2060914 | + | 225 | Protein_2011 | YdeI family stress tolerance OB fold protein | - |
| C1P82_RS10565 () | 2060980..2062136 | + | 1157 | WP_134807629.1 | IS3 family transposase ISSd1 | Transposase |
| C1P82_RS10570 () | 2062385..2062480 | - | 96 | WP_000901367.1 | protein MgtS | - |
| C1P82_RS10575 () | 2062607..2063725 | - | 1119 | WP_000212732.1 | efflux MFS transporter YdeE | - |
| C1P82_RS10580 () | 2063989..2064888 | + | 900 | WP_000087224.1 | O-acetylserine/cysteine exporter | - |
| C1P82_RS10585 () | 2064919..2065137 | - | 219 | WP_000803659.1 | multiple antibiotic resistance protein MarB | - |
| C1P82_RS10590 () | 2065169..2065552 | - | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| C1P82_RS10595 () | 2065572..2066006 | - | 435 | WP_000843419.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| C1P82_RS10600 () | 2066218..2066883 | + | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|