MGE detailed information
MGE type: Prophage MGE length: 35163 bp
Accession: NZ_CP026799 Location: 1607915..1643077 Organism: Shigella flexneri strain NCTC 9728 Replicon: chromosome
Accession: NZ_CP026799 Location: 1607915..1643077 Organism: Shigella flexneri strain NCTC 9728 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P82_RS08035 () | 1603041..1604668 | + | 1628 | Protein_1540 | toxic metabolite efflux MATE transporter YeeO | - |
| C1P82_RS08045 () | 1605300..1606016 | - | 717 | WP_000532920.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| C1P82_RS08050 () | 1606359..1607813 | - | 1455 | WP_001060217.1 | AMP nucleosidase | - |
| C1P82_RS08055 () | 1607915..1608121 | - | 207 | WP_000466572.1 | hypothetical protein | - |
| C1P82_RS08065 () | 1609383..1609886 | - | 504 | WP_005063096.1 | MFS transporter | - |
| C1P82_RS08070 () | 1609948..1611116 | + | 1169 | WP_094096545.1 | IS3 family transposase ISLad1 | Transposase |
| C1P82_RS08075 () | 1611223..1612485 | - | 1263 | Protein_1547 | hypothetical protein ; Integrase | Integrase |
| C1P82_RS08085 () | 1612823..1613620 | - | 798 | WP_001325918.1 | DgsA anti-repressor MtfA | - |
| C1P82_RS08095 () | 1613831..1614868 | - | 1038 | WP_005105555.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| C1P82_RS08100 () | 1614868..1615044 | - | 177 | WP_044023995.1 | DUF4224 domain-containing protein | - |
| C1P82_RS08105 () | 1615077..1615774 | + | 698 | Protein_1551 | IS1 family transposase IS1X2 | Transposase |
| C1P82_RS08110 () | 1615906..1616220 | - | 315 | WP_001317924.1 | 3'-5' exoribonuclease | - |
| C1P82_RS08115 () | 1616250..1616947 | - | 698 | Protein_1553 | IS1 family transposase IS1X2 | Transposase |
| C1P82_RS08120 () | 1617018..1617434 | + | 417 | WP_005069274.1 | hypothetical protein | - |
| - () | 1618016..1618074 | - | 59 | - | - | Antitoxin Detail |
| C1P82_RS08135 () | 1618086..1618241 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| C1P82_RS08140 () | 1618283..1618468 | - | 186 | WP_001302544.1 | hypothetical protein | - |
| C1P82_RS08145 () | 1618409..1618687 | + | 279 | WP_011069426.1 | hypothetical protein | - |
| C1P82_RS08150 () | 1618689..1619747 | + | 1059 | Protein_1558 | DUF968 domain-containing protein | - |
| C1P82_RS08155 () | 1619748..1620113 | + | 366 | WP_000140020.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C1P82_RS08160 () | 1620110..1620797 | + | 688 | Protein_1560 | antiterminator | - |
| C1P82_RS24100 () | 1620827..1620948 | + | 122 | Protein_1561 | antiterminator | - |
| C1P82_RS08185 () | 1621593..1621808 | + | 216 | WP_000839572.1 | class II holin family protein | - |
| C1P82_RS08190 () | 1621907..1622581 | + | 675 | WP_134800537.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P82_RS08195 () | 1622578..1622925 | + | 348 | WP_000631709.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P82_RS08200 () | 1622945..1623752 | + | 808 | Protein_1565 | IS66 family transposase ISSfl3 | Transposase |
| C1P82_RS08205 () | 1623818..1624974 | + | 1157 | WP_134807611.1 | IS3 family transposase IS600 | Transposase |
| C1P82_RS08210 () | 1625015..1625494 | + | 480 | Protein_1567 | DUF4376 domain-containing protein | - |
| C1P82_RS08220 () | 1625674..1627317 | - | 1644 | WP_134800566.1 | hypothetical protein | VF |
| C1P82_RS08225 () | 1627633..1628301 | - | 669 | WP_000239881.1 | class I SAM-dependent methyltransferase | - |
| C1P82_RS08230 () | 1628358..1628627 | + | 270 | WP_000937511.1 | tail fiber assembly protein | - |
| C1P82_RS08240 () | 1629705..1630355 | - | 651 | WP_001007775.1 | metal-binding protein ZinT | - |
| C1P82_RS08245 () | 1630613..1631248 | - | 636 | WP_134800565.1 | protein-methionine-sulfoxide reductase heme-binding subunit MsrQ | - |
| C1P82_RS08250 () | 1631249..1632253 | - | 1005 | Protein_1573 | protein-methionine-sulfoxide reductase catalytic subunit MsrP | - |
| C1P82_RS08255 () | 1632362..1632775 | - | 414 | WP_000920127.1 | hydroxyisourate hydrolase | - |
| C1P82_RS08260 () | 1632908..1633579 | + | 672 | WP_001347103.1 | Sensor histidine kinase RcsC | VF |
| C1P82_RS08265 () | 1633579..1634937 | + | 1359 | WP_000826717.1 | two-component system sensor histidine kinase HprS | - |
| C1P82_RS08270 () | 1635045..1635896 | - | 852 | WP_000218218.1 | protein deglycase HchA | - |
| C1P82_RS08275 () | 1635942..1636639 | - | 698 | Protein_1578 | IS1 family transposase IS1X2 | Transposase |
| C1P82_RS08280 () | 1637267..1637446 | - | 180 | Protein_1579 | porin | - |
| C1P82_RS08285 () | 1637540..1638768 | + | 1229 | WP_134800564.1 | IS3 family transposase IS2 | Transposase |
| C1P82_RS08290 () | 1638777..1639541 | - | 765 | Protein_1581 | porin | - |
| C1P82_RS08295 () | 1639607..1640754 | + | 1148 | WP_094099456.1 | IS3 family transposase ISEhe3 | Transposase |
| C1P82_RS08300 () | 1640755..1641012 | + | 258 | WP_032155863.1 | hypothetical protein | - |
| C1P82_RS08305 () | 1641052..1641592 | + | 541 | Protein_1584 | phosphohydrolase | - |
| C1P82_RS08310 () | 1641659..1643077 | + | 1419 | WP_001157215.1 | DNA-cytosine methyltransferase | - |
| C1P82_RS08315 () | 1643058..1643528 | + | 471 | WP_000228688.1 | VSPR family DNA mismatch endonuclease | - |
| C1P82_RS08320 () | 1643517..1644437 | - | 921 | WP_001212270.1 | drug/metabolite exporter YedA | - |
| C1P82_RS08325 () | 1644610..1645527 | + | 918 | WP_000922688.1 | DUF808 domain-containing protein | - |
| C1P82_RS08330 () | 1645606..1645788 | + | 183 | WP_000009302.1 | DUF2158 domain-containing protein | - |
| C1P82_RS08335 () | 1645959..1647653 | + | 1695 | Protein_1590 | cellulose biosynthesis regulator YedQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|