MGE detailed information
MGE type: IScluster/Tn MGE length: 33898 bp
Accession: NZ_CP026796 Location: 119684..153581 Organism: Shigella boydii strain ATCC BAA-1247 Replicon: plasmid unnamed
Accession: NZ_CP026796 Location: 119684..153581 Organism: Shigella boydii strain ATCC BAA-1247 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5B80_RS24900 () | 115228..117489 | + | 2262 | WP_001100761.1 | TonB-dependent receptor | - |
| C5B80_RS24910 () | 117558..118733 | + | 1176 | WP_001020414.1 | enterotoxin production-related protein TieB | - |
| C5B80_RS24915 () | 119106..119294 | - | 189 | Protein_131 | IS91 family transposase | - |
| C5B80_RS24920 () | 119372..119541 | + | 170 | Protein_132 | HNH endonuclease | - |
| C5B80_RS24925 () | 119684..119905 | + | 222 | Protein_133 | IS66 family transposase ISCro1 | Transposase |
| C5B80_RS24930 () | 119926..119988 | - | 63 | Protein_134 | IS66 family transposase ISCro1 | Transposase |
| C5B80_RS24935 () | 120439..121851 | + | 1413 | WP_001026856.1 | hypothetical protein | VF |
| C5B80_RS24940 () | 121955..122102 | - | 148 | Protein_136 | IS1 family transposase | - |
| C5B80_RS24945 () | 122178..123874 | + | 1697 | Protein_137 | hypothetical protein | VF |
| C5B80_RS24955 () | 123991..124110 | + | 120 | Protein_138 | IS66 family transposase ISCro1 | Transposase |
| C5B80_RS24965 () | 124277..124549 | + | 273 | WP_000019158.1 | hypothetical protein | - |
| C5B80_RS24970 () | 124530..125738 | + | 1209 | WP_134810438.1 | IS91 family transposase ISSbo1 | Transposase |
| C5B80_RS24975 () | 125911..126006 | - | 96 | Protein_141 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C5B80_RS24980 () | 126006..126089 | - | 84 | Protein_142 | CopG family transcriptional regulator | - |
| C5B80_RS24985 () | 126119..126448 | - | 330 | Protein_143 | Tn3 family transposase TnpA_ISSod9 | Transposase |
| C5B80_RS24990 () | 126533..126898 | + | 366 | WP_000124079.1 | hypothetical protein | - |
| C5B80_RS24995 () | 126898..128085 | + | 1188 | WP_024258531.1 | IS91 family transposase ISEc37 | Transposase |
| C5B80_RS25005 () | 128623..128910 | - | 288 | WP_000865087.1 | helix-turn-helix transcriptional regulator | - |
| C5B80_RS25010 () | 128910..129221 | - | 312 | WP_000483533.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C5B80_RS25015 () | 129682..130878 | + | 1197 | WP_134810439.1 | IS110 family transposase ISEc20 | Transposase |
| C5B80_RS25020 () | 131247..131513 | - | 267 | WP_000957717.1 | hypothetical protein | VF |
| C5B80_RS25025 () | 131695..131808 | - | 114 | Protein_150 | transposase | - |
| C5B80_RS25030 () | 131853..132550 | + | 698 | Protein_151 | IS1 family transposase IS1R | Transposase |
| C5B80_RS25035 () | 132882..133670 | + | 789 | WP_005116773.1 | AraC family invasion system transcriptional regulator VirF | - |
| C5B80_RS25040 () | 133663..134034 | - | 372 | Protein_153 | IS21 family transposase IS100 | Transposase |
| C5B80_RS25045 () | 134033..134451 | + | 419 | Protein_154 | transposase | - |
| C5B80_RS25050 () | 134525..135601 | + | 1077 | Protein_155 | IS3 family transposase IS911 | Transposase |
| C5B80_RS25055 () | 135797..135952 | + | 156 | Protein_156 | IS256 family transposase ISEc39 | Transposase |
| C5B80_RS25060 () | 135982..137709 | - | 1728 | WP_012421744.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| C5B80_RS25065 () | 138099..138367 | - | 269 | Protein_158 | hypothetical protein | VF |
| C5B80_RS26290 () | 138476..138606 | - | 131 | Protein_159 | IS1 family transposase | - |
| C5B80_RS26180 () | 139015..139167 | - | 153 | WP_011114782.1 | hypothetical protein | - |
| C5B80_RS25075 () | 139206..139729 | + | 524 | Protein_161 | IS3 family transposase ISSfl11 | Transposase |
| C5B80_RS25080 () | 139772..140981 | - | 1210 | Protein_162 | IS3 family transposase IS629 | Transposase |
| C5B80_RS25090 () | 141284..141466 | + | 183 | WP_089519923.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| C5B80_RS25095 () | 141486..143087 | + | 1602 | WP_004967149.1 | IS66 family transposase ISSfl3 | Transposase |
| C5B80_RS25100 () | 143087..143584 | + | 498 | Protein_165 | IS1 family transposase | - |
| C5B80_RS26185 () | 143743..144381 | + | 639 | WP_000607008.1 | hypothetical protein | VF |
| C5B80_RS25110 () | 144496..144765 | + | 270 | Protein_167 | IS3 family transposase ISEc48 | Transposase |
| C5B80_RS25115 () | 144853..146081 | + | 1229 | WP_167549346.1 | IS3 family transposase IS2 | Transposase |
| C5B80_RS25125 () | 146329..146455 | + | 127 | Protein_169 | IS110 family transposase | - |
| C5B80_RS25145 () | 148306..148590 | + | 285 | WP_011114751.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| C5B80_RS25150 () | 148578..149063 | + | 486 | WP_000501969.1 | GNAT family N-acetyltransferase | Toxin Detail |
| C5B80_RS25155 () | 149104..150696 | - | 1593 | WP_001072392.1 | IS66 family transposase ISEc43 | Transposase |
| C5B80_RS25160 () | 150727..151077 | - | 351 | Protein_174 | IS66 family transposase ISEc23 | Transposase |
| C5B80_RS25165 () | 151074..151841 | - | 768 | Protein_175 | IS66 family transposase IS682 | Transposase |
| C5B80_RS25170 () | 152143..153356 | + | 1214 | WP_171766231.1 | IS3 family transposase IS629 | Transposase |
| C5B80_RS25175 () | 153393..153572 | + | 180 | Protein_177 | IS66 family transposase IS679 | Transposase |
| C5B80_RS25185 () | 154149..155276 | + | 1128 | Protein_178 | group II intron reverse transcriptase/maturase | - |
| C5B80_RS25190 () | 155359..155538 | + | 180 | Protein_179 | transposase domain-containing protein | - |
| C5B80_RS25195 () | 155568..156050 | - | 483 | Protein_180 | IS110 family transposase | - |
| C5B80_RS25200 () | 156306..157286 | - | 981 | WP_000431558.1 | ParB/RepB/Spo0J family partition protein | - |
| C5B80_RS25205 () | 157286..158485 | - | 1200 | WP_000200287.1 | AAA family ATPase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|