MGE detailed information
MGE type: IScluster/Tn MGE length: 11456 bp
Accession: NZ_CP026795 Location: 2348231..2359686 Organism: Shigella boydii strain ATCC BAA-1247 Replicon: chromosome
Accession: NZ_CP026795 Location: 2348231..2359686 Organism: Shigella boydii strain ATCC BAA-1247 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5B80_RS12525 () | 2346524..2347321 | - | 798 | WP_001302302.1 | DgsA anti-repressor MtfA | - |
| C5B80_RS12535 () | 2347532..2347987 | - | 456 | WP_114142313.1 | integrase | - |
| C5B80_RS12540 () | 2348037..2348734 | + | 698 | Protein_2389 | IS1 family transposase IS1X2 | Transposase |
| C5B80_RS12545 () | 2348684..2348989 | - | 306 | Protein_2390 | hypothetical protein | - |
| C5B80_RS12550 () | 2349056..2350212 | + | 1157 | WP_134796775.1 | IS3 family transposase IS600 | Transposase |
| C5B80_RS12560 () | 2350256..2350555 | - | 300 | Protein_2392 | DUF968 domain-containing protein | - |
| C5B80_RS12565 () | 2350595..2352133 | - | 1539 | WP_000099170.1 | IS66 family transposase ISEc22 | Transposase |
| C5B80_RS12570 () | 2352182..2352529 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| C5B80_RS12575 () | 2352526..2352906 | - | 381 | WP_001333468.1 | IS66 family transposase ISEc8 | Transposase |
| C5B80_RS12585 () | 2352999..2353460 | - | 462 | Protein_2396 | hypothetical protein | - |
| C5B80_RS12590 () | 2353462..2353740 | - | 279 | WP_000929754.1 | hypothetical protein | - |
| - () | 2353908..2354063 | - | 156 | - | - | Toxin Detail |
| C5B80_RS12600 () | 2353908..2354063 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - () | 2354075..2354133 | + | 59 | - | - | Antitoxin Detail |
| - () | 2354075..2354133 | + | 59 | - | - | Antitoxin Detail |
| C5B80_RS12615 () | 2354715..2355157 | - | 443 | Protein_2399 | hypothetical protein | - |
| C5B80_RS12620 () | 2355201..2355581 | + | 381 | WP_001333468.1 | IS66 family transposase ISEc8 | Transposase |
| C5B80_RS12625 () | 2355578..2355925 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| C5B80_RS12630 () | 2355974..2357512 | + | 1539 | WP_134802545.1 | IS66 family transposase ISEc22 | Transposase |
| C5B80_RS12635 () | 2357509..2357868 | + | 360 | WP_073692993.1 | 3'-5' exoribonuclease | - |
| C5B80_RS12640 () | 2357927..2358130 | + | 204 | WP_000096344.1 | DUF4224 domain-containing protein | - |
| C5B80_RS12645 () | 2358130..2358485 | + | 356 | Protein_2405 | integrase | - |
| C5B80_RS12655 () | 2359926..2360516 | + | 591 | WP_000377820.1 | DUF2313 domain-containing protein | - |
| C5B80_RS26000 () | 2360503..2361170 | + | 668 | Protein_2408 | phage tail protein | - |
| C5B80_RS26005 () | 2361191..2361712 | + | 522 | WP_165850228.1 | hypothetical protein | - |
| C5B80_RS12665 () | 2361715..2362260 | + | 546 | WP_000902895.1 | tail fiber assembly protein | - |
| C5B80_RS12670 () | 2362284..2363342 | + | 1059 | WP_119180387.1 | prophage tail fiber N-terminal domain-containing protein | - |
| C5B80_RS12675 () | 2363293..2363916 | + | 624 | WP_000930154.1 | DUF4376 domain-containing protein | - |
| C5B80_RS26010 () | 2363916..2364095 | + | 180 | WP_001039895.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|