MGE detailed information
MGE type: IScluster/Tn MGE length: 42799 bp
Accession: NZ_CP026794 Location: 468..43266 Organism: Shigella flexneri strain 74-1170 Replicon: plasmid unnamed
Accession: NZ_CP026794 Location: 468..43266 Organism: Shigella flexneri strain 74-1170 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P81_RS24415 | 1..1085 | + | 1085 | Protein_0 | IS91 family transposase | - |
| C1P81_RS24425 | 1298..2106 | + | 809 | WP_094096897.1 | IS5-like element ISSfl7 family transposase | - |
| C1P81_RS24430 | 2221..3252 | + | 1032 | WP_004998488.1 | IS630-like element IS630 family transposase | - |
| C1P81_RS24435 | 3446..4136 | + | 691 | Protein_3 | IS1 family transposase | - |
| C1P81_RS24440 | 4153..4332 | - | 180 | Protein_4 | transposase | - |
| C1P81_RS26225 | 4666..6371 | + | 1706 | Protein_5 | T3SS effector E3 ubiquitin-protein ligase IpaH7.8 | - |
| C1P81_RS27095 | 6802..6903 | + | 102 | Protein_6 | hypothetical protein | - |
| C1P81_RS24455 | 6988..8527 | + | 1540 | Protein_7 | T3SS effector E3 ubiquitin-protein ligase IpaH4.5 | - |
| C1P81_RS24460 | 8579..9787 | + | 1209 | Protein_8 | IS3 family transposase | - |
| C1P81_RS26510 | 9831..10043 | - | 213 | Protein_9 | DDE-type integrase/transposase/recombinase | - |
| C1P81_RS24470 | 10318..10593 | + | 276 | WP_227804373.1 | S-type pyocin domain-containing protein | - |
| C1P81_RS24475 | 10791..12155 | + | 1365 | WP_000051931.1 | MFS transporter | - |
| C1P81_RS24480 | 12205..12414 | + | 210 | Protein_12 | peptidoglycan-binding protein | - |
| C1P81_RS24485 | 12508..12699 | - | 192 | Protein_13 | ATP-binding protein | - |
| C1P81_RS24490 | 12740..13237 | - | 498 | Protein_14 | transposase | - |
| C1P81_RS24500 | 13340..14548 | - | 1209 | Protein_15 | IS3 family transposase | - |
| C1P81_RS24510 | 14728..15462 | + | 735 | Protein_16 | IS21-like element helper ATPase IstB | - |
| C1P81_RS24515 | 15838..17046 | - | 1209 | WP_000198554.1 | IS91 family transposase | - |
| C1P81_RS24520 | 17027..17299 | - | 273 | WP_000019158.1 | hypothetical protein | - |
| C1P81_RS24530 | 17466..17585 | - | 120 | Protein_19 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P81_RS24540 | 17702..19399 | - | 1698 | WP_024259347.1 | type III secretion system effector OspD3 | - |
| C1P81_RS24545 | 19475..19624 | + | 150 | Protein_21 | IS1 family transposase | - |
| C1P81_RS24550 | 19728..21140 | - | 1413 | WP_001026857.1 | type 3 secretion system effector OspC1 | - |
| C1P81_RS24555 | 21590..21652 | + | 63 | Protein_23 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P81_RS24560 | 21673..21894 | - | 222 | Protein_24 | transposase | - |
| C1P81_RS24565 | 22037..22230 | - | 194 | Protein_25 | HNH endonuclease | - |
| C1P81_RS24575 | 23434..23907 | - | 474 | WP_005038443.1 | AraC family transcriptional regulator | - |
| C1P81_RS24580 | 24158..25354 | + | 1197 | WP_005085088.1 | IS110-like element ISSfl4 family transposase | - |
| C1P81_RS24585 | 25349..25773 | - | 425 | Protein_29 | hypothetical protein | - |
| C1P81_RS24590 | 26001..26639 | - | 639 | WP_000502854.1 | ParB N-terminal domain-containing protein | - |
| C1P81_RS24595 | 26624..26767 | - | 144 | Protein_31 | DUF3440 domain-containing protein | - |
| C1P81_RS24610 | 29371..29652 | + | 282 | Protein_34 | IS4/IS5 family transposase | - |
| C1P81_RS24615 | 29825..30310 | - | 486 | WP_000501974.1 | GNAT family N-acetyltransferase | Toxin Detail |
| C1P81_RS24620 | 30298..30582 | - | 285 | WP_011114751.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| C1P81_RS26515 | 31484..31648 | + | 165 | WP_001346193.1 | hypothetical protein | - |
| C1P81_RS24645 | 31902..33503 | - | 1602 | WP_005063916.1 | IS66-like element ISSfl3 family transposase | - |
| C1P81_RS24650 | 33500..33850 | - | 351 | WP_005048975.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P81_RS24655 | 33847..34521 | - | 675 | WP_001088287.1 | IS66-like element accessory protein TnpA | - |
| C1P81_RS24660 | 35095..36549 | + | 1455 | WP_015683184.1 | type 3 secretion system effector OspC4 | - |
| C1P81_RS24670 | 36887..37951 | + | 1065 | Protein_42 | IS3 family transposase | - |
| C1P81_RS24675 | 37992..38795 | + | 804 | Protein_43 | IS3 family transposase | - |
| C1P81_RS27100 | 38910..39251 | + | 342 | Protein_44 | IS21 family transposase | - |
| C1P81_RS24680 | 39234..40071 | + | 838 | Protein_45 | IS4 family transposase | - |
| C1P81_RS24685 | 40121..41317 | - | 1197 | WP_005119583.1 | IS110-like element ISSfl4 family transposase | - |
| C1P81_RS24690 | 41509..42513 | - | 1005 | WP_000255980.1 | IS21 family transposase | - |
| C1P81_RS27105 | 42860..43669 | + | 810 | Protein_48 | IS110 family transposase | - |
| C1P81_RS24695 | 43866..44645 | + | 780 | WP_005059304.1 | type III secretion system effector cysteine protease IpaJ | - |
| C1P81_RS24700 | 45592..46521 | - | 930 | WP_000227976.1 | virulence regulon transcriptional activator VirB | - |
| C1P81_RS24705 | 46738..46974 | - | 237 | WP_000588813.1 | phosphopantetheine-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|