MGE detailed information
MGE type: IScluster/Tn MGE length: 49615 bp
Accession: NZ_CP026794 Location: 201488..251102 Organism: Shigella flexneri strain 74-1170 Replicon: plasmid unnamed
Accession: NZ_CP026794 Location: 201488..251102 Organism: Shigella flexneri strain 74-1170 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P81_RS25740 | 197559..198539 | + | 981 | WP_000431558.1 | ParB family protein | - |
| C1P81_RS25745 | 198795..199280 | + | 486 | WP_000003223.1 | IS110 family transposase | - |
| C1P81_RS25750 | 199307..199486 | - | 180 | Protein_241 | transposase domain-containing protein | - |
| C1P81_RS25755 | 199569..200696 | - | 1128 | WP_014526552.1 | group II intron reverse transcriptase/maturase | - |
| C1P81_RS27165 | 200618..200956 | + | 339 | WP_227804374.1 | hypothetical protein | - |
| C1P81_RS25765 | 201272..201451 | - | 180 | Protein_244 | IS66 family transposase | - |
| C1P81_RS25770 | 201488..201961 | - | 474 | Protein_245 | IS3 family transposase | - |
| C1P81_RS25775 | 202051..203559 | - | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| C1P81_RS25785 | 204232..204967 | - | 736 | Protein_247 | IS3 family transposase | - |
| C1P81_RS25790 | 205024..205320 | - | 297 | Protein_248 | DDE-type integrase/transposase/recombinase | - |
| C1P81_RS25795 | 205436..205624 | + | 189 | WP_000957853.1 | hypothetical protein | - |
| C1P81_RS25800 | 205634..206833 | + | 1200 | WP_000947175.1 | IS91 family transposase | - |
| C1P81_RS25805 | 207006..207760 | - | 755 | Protein_251 | helix-turn-helix domain-containing protein | - |
| C1P81_RS25810 | 207771..208130 | + | 360 | Protein_252 | ATP-binding protein | - |
| C1P81_RS25815 | 208123..208911 | - | 789 | WP_005116773.1 | AraC family invasion system transcriptional regulator VirF | - |
| C1P81_RS25820 | 209340..209741 | + | 402 | Protein_254 | integrase core domain-containing protein | - |
| C1P81_RS25825 | 209923..210189 | + | 267 | WP_000957712.1 | type 3 secretion system effector OspE2 | - |
| C1P81_RS25830 | 210379..211076 | + | 698 | WP_252988952.1 | IS1 family transposase | - |
| C1P81_RS25835 | 211337..212533 | - | 1197 | WP_005085088.1 | IS110-like element ISSfl4 family transposase | - |
| C1P81_RS25840 | 212869..214560 | + | 1692 | Protein_258 | E3 ubiquitin--protein ligase | - |
| C1P81_RS25845 | 214612..215820 | + | 1209 | Protein_259 | IS3 family transposase | - |
| C1P81_RS25850 | 215863..216386 | - | 524 | Protein_260 | IS3-like element ISSfl11 family transposase | - |
| C1P81_RS25855 | 216454..216936 | - | 483 | WP_000405245.1 | GNAT family N-acetyltransferase | Toxin Detail |
| C1P81_RS25860 | 216927..217229 | - | 303 | WP_010921625.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| C1P81_RS25870 | 217501..217773 | + | 273 | WP_000019158.1 | hypothetical protein | - |
| C1P81_RS25875 | 217754..218962 | + | 1209 | WP_000198554.1 | IS91 family transposase | - |
| C1P81_RS26150 | 219134..219262 | + | 129 | Protein_265 | IS5/IS1182 family transposase | - |
| C1P81_RS25890 | 219411..220865 | - | 1455 | WP_000701108.1 | type 3 secretion system effector OspC2 | - |
| C1P81_RS25895 | 221269..221888 | + | 620 | Protein_267 | IS1 family transposase | - |
| C1P81_RS25900 | 221938..223147 | + | 1210 | Protein_268 | IS3 family transposase | - |
| C1P81_RS25905 | 223191..223601 | + | 411 | Protein_269 | transposase | - |
| C1P81_RS25910 | 223633..224247 | + | 615 | Protein_270 | IS21-like element ISEc10 family helper ATPase IstB | - |
| C1P81_RS25915 | 224416..228510 | - | 4095 | WP_001034121.1 | serine protease autotransporter toxin SepA | - |
| C1P81_RS25925 | 228912..229100 | + | 189 | WP_000957853.1 | hypothetical protein | - |
| C1P81_RS25930 | 229110..230308 | + | 1199 | WP_094081539.1 | IS91 family transposase | - |
| C1P81_RS25940 | 230521..231329 | + | 809 | WP_094096897.1 | IS5-like element ISSfl7 family transposase | - |
| C1P81_RS25945 | 231444..232475 | + | 1032 | WP_004998488.1 | IS630-like element IS630 family transposase | - |
| C1P81_RS25950 | 232669..233359 | + | 691 | Protein_276 | IS1 family transposase | - |
| C1P81_RS25955 | 233376..233555 | - | 180 | Protein_277 | transposase | - |
| C1P81_RS25960 | 233884..235581 | + | 1698 | WP_010921637.1 | T3SS effector E3 ubiquitin-protein ligase IpaH7.8 | - |
| C1P81_RS25965 | 236009..237733 | + | 1725 | WP_010921638.1 | T3SS effector E3 ubiquitin-protein ligase IpaH4.5 | - |
| C1P81_RS25970 | 237785..238993 | + | 1209 | Protein_280 | IS3 family transposase | - |
| C1P81_RS26560 | 239037..239249 | - | 213 | Protein_281 | DDE-type integrase/transposase/recombinase | - |
| C1P81_RS25980 | 239524..239799 | + | 276 | WP_227804373.1 | S-type pyocin domain-containing protein | - |
| C1P81_RS25985 | 239997..241361 | + | 1365 | WP_000051931.1 | MFS transporter | - |
| C1P81_RS25990 | 241411..241620 | + | 210 | Protein_284 | peptidoglycan-binding protein | - |
| C1P81_RS25995 | 241714..241905 | - | 192 | Protein_285 | ATP-binding protein | - |
| C1P81_RS26000 | 241946..242443 | - | 498 | Protein_286 | transposase | - |
| C1P81_RS26010 | 242546..243754 | - | 1209 | Protein_287 | IS3 family transposase | - |
| C1P81_RS26020 | 243934..244668 | + | 735 | Protein_288 | IS21-like element helper ATPase IstB | - |
| C1P81_RS26030 | 246234..246506 | - | 273 | WP_000019158.1 | hypothetical protein | - |
| C1P81_RS26040 | 246673..246792 | - | 120 | Protein_291 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P81_RS26050 | 246910..248606 | - | 1697 | Protein_292 | type III secretion system effector OspD3 | - |
| C1P81_RS26055 | 248682..248831 | + | 150 | Protein_293 | IS1 family transposase | - |
| C1P81_RS26060 | 248935..250348 | - | 1414 | Protein_294 | type 3 secretion system effector OspC1 | - |
| C1P81_RS26065 | 250798..250860 | + | 63 | Protein_295 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P81_RS26070 | 250881..251102 | - | 222 | Protein_296 | transposase | - |
| C1P81_RS27170 | 251113..251323 | - | 211 | WP_252988953.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|