MGE detailed information
MGE type: Prophage MGE length: 50804 bp
Accession: NZ_CP026793 Location: 4682160..4732963 Organism: Shigella flexneri strain 74-1170 Replicon: chromosome
Accession: NZ_CP026793 Location: 4682160..4732963 Organism: Shigella flexneri strain 74-1170 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P81_RS23990 () | 4677409..4677879 | - | 471 | Protein_4603 | response regulator | - |
| C1P81_RS23995 () | 4678012..4678425 | + | 414 | WP_000920127.1 | hydroxyisourate hydrolase | - |
| C1P81_RS24000 () | 4678534..4679538 | + | 1005 | Protein_4605 | protein-methionine-sulfoxide reductase catalytic subunit MsrP | - |
| C1P81_RS24005 () | 4679539..4680174 | + | 636 | WP_001240061.1 | protein-methionine-sulfoxide reductase heme-binding subunit MsrQ | - |
| C1P81_RS24010 () | 4680432..4681082 | + | 651 | WP_001007781.1 | metal-binding protein ZinT | - |
| C1P81_RS24020 () | 4682160..4682429 | - | 270 | WP_000937511.1 | tail fiber assembly protein | - |
| C1P81_RS24025 () | 4682486..4683154 | + | 669 | WP_000239881.1 | class I SAM-dependent methyltransferase | - |
| C1P81_RS24030 () | 4683470..4685113 | + | 1644 | WP_014532281.1 | T3SS effector E3 ubiquitin-protein ligase IpaH4/H7 | - |
| C1P81_RS24040 () | 4685293..4685772 | - | 480 | Protein_4611 | DUF4376 domain-containing protein | - |
| C1P81_RS24045 () | 4685813..4686670 | - | 858 | Protein_4612 | IS3 family transposase | - |
| C1P81_RS24050 () | 4686728..4687425 | + | 698 | WP_223368647.1 | IS1 family transposase | - |
| C1P81_RS24055 () | 4687518..4688000 | - | 483 | WP_000594909.1 | hypothetical protein | - |
| C1P81_RS24060 () | 4688068..4690017 | - | 1950 | WP_000785377.1 | phage tail tape measure protein | - |
| C1P81_RS24065 () | 4690102..4690437 | - | 336 | WP_001251340.1 | phage tail assembly protein | - |
| C1P81_RS24070 () | 4690437..4690793 | - | 357 | WP_001062338.1 | phage tail tube protein | - |
| C1P81_RS24075 () | 4690793..4692289 | - | 1497 | WP_000155744.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| C1P81_RS24080 () | 4692286..4692447 | - | 162 | WP_000497744.1 | DUF2635 domain-containing protein | - |
| C1P81_RS24085 () | 4692457..4692816 | - | 360 | Protein_4620 | hypothetical protein | - |
| C1P81_RS24095 () | 4694063..4694875 | - | 813 | Protein_4622 | IS66-like element ISSfl3 family transposase | - |
| C1P81_RS24100 () | 4694872..4695222 | - | 351 | WP_005049241.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P81_RS24105 () | 4695219..4695893 | - | 675 | WP_004967157.1 | IS66-like element accessory protein TnpA | - |
| C1P81_RS24110 () | 4695992..4696207 | - | 216 | WP_000839572.1 | class II holin family protein | - |
| C1P81_RS24140 () | 4697003..4697691 | - | 689 | Protein_4626 | bacteriophage antitermination protein Q | - |
| C1P81_RS24145 () | 4697688..4698053 | - | 366 | WP_000140020.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C1P81_RS24150 () | 4698054..4699112 | - | 1059 | WP_001265248.1 | DUF968 domain-containing protein | - |
| C1P81_RS24155 () | 4699114..4699392 | - | 279 | WP_011069426.1 | hypothetical protein | - |
| C1P81_RS24165 () | 4699560..4699715 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - | 4699727..4699785 | + | 59 | - | - | Antitoxin Detail |
| C1P81_RS24180 () | 4700367..4700783 | - | 417 | WP_005069274.1 | hypothetical protein | - |
| C1P81_RS24185 () | 4700810..4700950 | + | 141 | Protein_4632 | DUF4224 domain-containing protein | - |
| C1P81_RS24190 () | 4700950..4702000 | + | 1051 | Protein_4633 | tyrosine-type recombinase/integrase | - |
| C1P81_RS24200 () | 4702211..4703008 | + | 798 | WP_001325918.1 | DgsA anti-repressor MtfA | - |
| C1P81_RS24210 () | 4703346..4704608 | + | 1263 | Protein_4635 | tyrosine-type recombinase/integrase | - |
| C1P81_RS24220 () | 4705939..4706445 | + | 507 | Protein_4637 | MFS transporter | - |
| C1P81_RS24225 () | 4706510..4707709 | + | 1200 | Protein_4638 | IS3 family transposase | - |
| C1P81_RS24230 () | 4707710..4707916 | + | 207 | WP_000466572.1 | hypothetical protein | - |
| C1P81_RS24235 () | 4708018..4709472 | + | 1455 | WP_001060217.1 | AMP nucleosidase | - |
| C1P81_RS24240 () | 4709815..4710531 | + | 717 | WP_000532920.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| C1P81_RS24250 () | 4711163..4712790 | - | 1628 | Protein_4642 | toxic metabolite efflux MATE transporter YeeO | - |
| C1P81_RS24260 () | 4712908..4713858 | - | 951 | WP_001010988.1 | HTH-type transcriptional regulator Cbl | - |
| C1P81_RS24265 () | 4713960..4714877 | - | 918 | WP_001011445.1 | nitrogen assimilation transcriptional regulator NAC | - |
| C1P81_RS24275 () | 4715336..4716271 | - | 936 | WP_000986341.1 | L,D-transpeptidase | - |
| C1P81_RS24280 () | 4716333..4717412 | - | 1080 | WP_001165576.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | - |
| C1P81_RS24285 () | 4717424..4718167 | - | 744 | WP_005049317.1 | adenosylcobinamide-GDP ribazoletransferase | - |
| C1P81_RS24290 () | 4718164..4718673 | - | 510 | WP_000261572.1 | bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | - |
| C1P81_RS24310 () | 4720084..4721293 | + | 1210 | Protein_4650 | IS3 family transposase | - |
| C1P81_RS24315 () | 4721671..4721817 | - | 147 | Protein_4651 | transposase domain-containing protein | - |
| C1P81_RS24320 () | 4721919..4722053 | + | 135 | WP_001297944.1 | EutP/PduV family microcompartment system protein | - |
| C1P81_RS24325 () | 4722154..4722483 | - | 330 | WP_000450409.1 | DUF496 family protein | - |
| C1P81_RS24330 () | 4722655..4722939 | - | 285 | Protein_4654 | hypothetical protein | - |
| C1P81_RS24335 () | 4723024..4723698 | + | 675 | WP_004967157.1 | IS66-like element accessory protein TnpA | - |
| C1P81_RS24340 () | 4723695..4723865 | + | 171 | Protein_4656 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P81_RS24345 () | 4723910..4724389 | - | 480 | Protein_4657 | IS3 family transposase | - |
| C1P81_RS24350 () | 4724473..4725981 | - | 1509 | WP_134799901.1 | group II intron reverse transcriptase/maturase | - |
| C1P81_RS24360 () | 4726654..4727389 | - | 736 | Protein_4659 | IS3 family transposase | - |
| C1P81_RS26505 () | 4727445..4727624 | + | 180 | Protein_4660 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P81_RS24370 () | 4727621..4729222 | + | 1602 | WP_045177795.1 | IS66-like element ISSfl3 family transposase | - |
| C1P81_RS24375 () | 4729256..4729642 | + | 387 | Protein_4662 | integrase core domain-containing protein | - |
| C1P81_RS24385 () | 4729694..4730047 | - | 354 | Protein_4663 | tyrosine-type recombinase/integrase | - |
| C1P81_RS24390 () | 4730077..4730493 | - | 417 | Protein_4664 | transposase | - |
| C1P81_RS24405 () | 4731758..4732045 | - | 288 | Protein_4666 | transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|