MGE detailed information
MGE type: Prophage MGE length: 59868 bp
Accession: NZ_CP026792 Location: 3329401..3389268 Organism: Shigella flexneri strain 61-4982 Replicon: chromosome
Accession: NZ_CP026792 Location: 3329401..3389268 Organism: Shigella flexneri strain 61-4982 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P80_RS17435 () | 3325050..3326339 | + | 1290 | WP_024260402.1 | adenosylmethionine--8-amino-7-oxononanoate transaminase | - |
| C1P80_RS17440 () | 3326398..3326874 | + | 477 | WP_000767391.1 | kinase inhibitor | - |
| C1P80_RS17450 () | 3327279..3327365 | - | 87 | Protein_3244 | transposase | - |
| C1P80_RS17455 () | 3327457..3329220 | + | 1764 | WP_000801164.1 | E3 ubiquitin--protein ligase | - |
| C1P80_RS17465 () | 3329401..3330024 | - | 624 | WP_134798388.1 | DUF4376 domain-containing protein | - |
| C1P80_RS17470 () | 3329975..3331386 | - | 1412 | Protein_3247 | prophage tail fiber N-terminal domain-containing protein | - |
| C1P80_RS17475 () | 3331450..3332049 | - | 600 | WP_001230368.1 | Transcriptional regulator MraZ | VF |
| C1P80_RS17480 () | 3332117..3335596 | - | 3480 | WP_000515521.1 | host specificity protein J | - |
| C1P80_RS17485 () | 3335657..3336259 | - | 603 | WP_000090877.1 | tail assembly protein | - |
| C1P80_RS17490 () | 3336196..3336939 | - | 744 | WP_000194737.1 | C40 family peptidase | - |
| C1P80_RS17495 () | 3336944..3337642 | - | 699 | WP_001152490.1 | phage minor tail protein L | - |
| C1P80_RS17500 () | 3337642..3337971 | - | 330 | WP_000447264.1 | phage tail protein | - |
| C1P80_RS17505 () | 3337971..3341012 | - | 3042 | WP_025761093.1 | phage tail tape measure protein | - |
| C1P80_RS17510 () | 3340984..3341313 | - | 330 | WP_001161004.1 | phage tail assembly protein T | - |
| C1P80_RS17515 () | 3341322..3341708 | - | 387 | WP_000478927.1 | phage minor tail protein G | - |
| C1P80_RS17520 () | 3341767..3342507 | - | 741 | WP_000211126.1 | Ig-like domain-containing protein | - |
| C1P80_RS17525 () | 3342518..3342919 | - | 402 | WP_001079406.1 | phage minor tail U family protein | - |
| C1P80_RS17530 () | 3342916..3343500 | - | 585 | WP_000677142.1 | phage tail protein | - |
| C1P80_RS17535 () | 3343487..3343864 | - | 378 | WP_000348593.1 | tail attachment protein | - |
| C1P80_RS17540 () | 3343876..3344262 | - | 387 | WP_000201488.1 | DNA-packaging protein FI | - |
| C1P80_RS17545 () | 3344314..3345342 | - | 1029 | WP_000522637.1 | major capsid protein | - |
| C1P80_RS17550 () | 3345400..3345747 | - | 348 | WP_000256830.1 | head decoration protein | - |
| C1P80_RS17555 () | 3345784..3347289 | - | 1506 | WP_001253885.1 | S49 family peptidase | - |
| C1P80_RS17560 () | 3347279..3348872 | - | 1594 | Protein_3265 | phage portal protein | - |
| C1P80_RS17565 () | 3348869..3349072 | - | 204 | WP_000259004.1 | head-tail joining protein | - |
| C1P80_RS17570 () | 3349056..3350984 | - | 1929 | WP_001026847.1 | phage terminase large subunit family protein | - |
| C1P80_RS17575 () | 3350956..3351264 | - | 309 | Protein_3268 | terminase small subunit | - |
| C1P80_RS17580 () | 3351307..3352346 | - | 1040 | Protein_3269 | IS3 family transposase IS600 | Transposase |
| C1P80_RS17585 () | 3352402..3353611 | + | 1210 | Protein_3270 | IS3 family transposase IS629 | Transposase |
| C1P80_RS17590 () | 3353653..3353772 | - | 120 | Protein_3271 | IS3 family transposase ISSfl10 | Transposase |
| C1P80_RS17595 () | 3353829..3354041 | - | 213 | WP_005107083.1 | hypothetical protein | - |
| C1P80_RS24525 () | 3354438..3354614 | + | 177 | WP_001205133.1 | hypothetical protein | - |
| C1P80_RS17610 () | 3354922..3355230 | - | 309 | WP_001346234.1 | hypothetical protein | - |
| C1P80_RS17615 () | 3355406..3356556 | + | 1151 | WP_134798392.1 | IS3 family transposase IS600 | Transposase |
| C1P80_RS17620 () | 3356600..3356779 | - | 180 | Protein_3276 | Rha family transcriptional regulator | - |
| C1P80_RS24530 () | 3356982..3357449 | - | 468 | WP_000092287.1 | lysis protein | - |
| C1P80_RS17630 () | 3357446..3357979 | - | 534 | WP_001274722.1 | lysozyme | - |
| C1P80_RS17635 () | 3358045..3358674 | - | 630 | WP_005083349.1 | hypothetical protein | - |
| C1P80_RS17640 () | 3358678..3358893 | - | 216 | WP_000839566.1 | class II holin family protein | - |
| C1P80_RS17665 () | 3359696..3360076 | - | 381 | WP_001204832.1 | antitermination protein | - |
| C1P80_RS17670 () | 3360069..3360269 | - | 201 | WP_000111769.1 | protein ninH | - |
| C1P80_RS17675 () | 3360364..3360621 | - | 258 | WP_001064799.1 | hypothetical protein | - |
| C1P80_RS17680 () | 3360618..3362009 | - | 1392 | WP_000211324.1 | replicative DNA helicase | - |
| C1P80_RS17685 () | 3362006..3362884 | - | 879 | WP_000988183.1 | ATP-binding protein | - |
| C1P80_RS17690 () | 3362895..3363803 | - | 909 | WP_001247840.1 | hypothetical protein | - |
| C1P80_RS17695 () | 3363790..3364023 | - | 234 | WP_000618004.1 | hypothetical protein | - |
| C1P80_RS17700 () | 3364020..3365036 | - | 1017 | Protein_3288 | Rha family transcriptional regulator | - |
| C1P80_RS17705 () | 3364968..3365231 | + | 264 | WP_001202685.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C1P80_RS17710 () | 3365221..3365529 | + | 309 | WP_000147081.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| C1P80_RS17715 () | 3365571..3365747 | - | 177 | WP_024260406.1 | NinE family protein | - |
| C1P80_RS17720 () | 3365744..3366154 | - | 411 | WP_000814621.1 | recombination protein NinB | - |
| C1P80_RS17725 () | 3366151..3366429 | - | 279 | WP_005107095.1 | hypothetical protein | - |
| C1P80_RS17730 () | 3366504..3367328 | - | 825 | WP_075332552.1 | hypothetical protein | - |
| C1P80_RS17740 () | 3368847..3368960 | - | 114 | Protein_3296 | DUF1133 family protein | - |
| C1P80_RS17745 () | 3368957..3369247 | - | 291 | WP_000228005.1 | DUF1364 domain-containing protein | - |
| C1P80_RS17750 () | 3369247..3369480 | - | 234 | Protein_3298 | DUF1367 family protein | - |
| C1P80_RS17755 () | 3369545..3370674 | + | 1130 | WP_094190774.1 | IS3 family transposase ISSfl10 | Transposase |
| C1P80_RS17760 () | 3370718..3371086 | - | 369 | Protein_3300 | DUF1367 family protein | - |
| C1P80_RS17765 () | 3371125..3371412 | - | 288 | WP_000687442.1 | hypothetical protein | - |
| C1P80_RS17770 () | 3371662..3371817 | - | 156 | WP_014532198.1 | type I toxin-antitoxin system toxin HokD | - |
| C1P80_RS17775 () | 3372045..3372710 | - | 666 | WP_012421537.1 | epoxyqueuosine reductase QueH | - |
| C1P80_RS17780 () | 3372879..3373235 | - | 357 | WP_005048249.1 | hypothetical protein | - |
| C1P80_RS17785 () | 3373293..3373715 | - | 423 | WP_001118167.1 | DUF977 family protein | - |
| C1P80_RS17790 () | 3373730..3374476 | - | 747 | Protein_3306 | ATP-binding protein | - |
| C1P80_RS17795 () | 3374483..3375272 | - | 790 | Protein_3307 | hypothetical protein | - |
| C1P80_RS17800 () | 3375350..3375772 | - | 423 | WP_000702036.1 | hypothetical protein | - |
| C1P80_RS17805 () | 3375756..3375983 | - | 228 | WP_000912291.1 | transcriptional regulator | - |
| C1P80_RS17810 () | 3376060..3376467 | + | 408 | WP_000787424.1 | helix-turn-helix domain-containing protein | - |
| C1P80_RS17815 () | 3376670..3376825 | + | 156 | WP_001091985.1 | DUF1391 family protein | - |
| C1P80_RS17820 () | 3376827..3377030 | + | 204 | WP_001005968.1 | hypothetical protein | - |
| C1P80_RS17830 () | 3377272..3378500 | - | 1229 | Protein_3313 | IS3 family transposase IS2 | Transposase |
| C1P80_RS17835 () | 3379048..3379896 | + | 849 | WP_000935590.1 | Rha family phage regulatory protein | - |
| C1P80_RS17840 () | 3379913..3380194 | + | 282 | WP_001069001.1 | hypothetical protein | - |
| C1P80_RS17845 () | 3380410..3381539 | + | 1130 | WP_134798247.1 | IS3 family transposase ISSfl10 | Transposase |
| C1P80_RS17850 () | 3381582..3382208 | - | 627 | Protein_3317 | exonuclease | - |
| C1P80_RS17855 () | 3382308..3382507 | - | 200 | Protein_3318 | hypothetical protein | - |
| C1P80_RS17860 () | 3382552..3383708 | - | 1157 | Protein_3319 | IS3 family transposase IS600 | Transposase |
| C1P80_RS17865 () | 3383774..3384391 | + | 618 | WP_005061679.1 | DUF4376 domain-containing protein | - |
| C1P80_RS24535 () | 3384391..3384570 | + | 180 | WP_001039888.1 | hypothetical protein | - |
| C1P80_RS17875 () | 3384571..3386397 | - | 1827 | WP_011110560.1 | Fructose-bisphosphate aldolase class 2 | VF |
| C1P80_RS17880 () | 3386888..3387019 | + | 132 | WP_005061694.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| C1P80_RS17885 () | 3387279..3388274 | + | 996 | WP_000815445.1 | 6-phosphogluconolactonase | - |
| C1P80_RS17890 () | 3388315..3389268 | - | 954 | Protein_3325 | LysR family transcriptional regulator | - |
| C1P80_RS17895 () | 3389452..3390504 | + | 1053 | WP_000723652.1 | 4-oxalomesaconate tautomerase | - |
| C1P80_RS17900 () | 3390580..3392013 | + | 1434 | WP_001036463.1 | anion permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|