MGE detailed information
MGE type: Prophage MGE length: 31910 bp
Accession: NZ_CP026788 Location: 2007531..2039440 Organism: Shigella flexneri 2a strain ATCC 29903 Replicon: chromosome
Accession: NZ_CP026788 Location: 2007531..2039440 Organism: Shigella flexneri 2a strain ATCC 29903 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P79_RS10720 (2002946) | 2002946..2003401 | - | 456 | WP_000194195.1 | hypothetical protein | - |
| C1P79_RS10725 (2003398) | 2003398..2003733 | - | 336 | Protein_2041 | DUF2773 domain-containing protein | - |
| C1P79_RS10730 (2003888) | 2003888..2004172 | - | 285 | WP_000941942.1 | pyrimidine/purine nucleoside phosphorylase | - |
| C1P79_RS10735 (2004244) | 2004244..2004921 | - | 678 | WP_001276420.1 | AroM family protein | - |
| C1P79_RS10740 (2005179) | 2005179..2005370 | - | 192 | WP_001142439.1 | protein YaiA | - |
| C1P79_RS10745 (2005420) | 2005420..2005944 | - | 525 | WP_000193385.1 | shikimate kinase AroL | - |
| C1P79_RS10750 (2006127) | 2006127..2006585 | - | 459 | WP_000158164.1 | YaiI/YqxD family protein | - |
| C1P79_RS10755 (2006705) | 2006705..2007514 | + | 810 | WP_001295331.1 | pyrroline-5-carboxylate reductase | - |
| C1P79_RS10760 (2007531) | 2007531..2008646 | - | 1116 | WP_005053118.1 | diguanylate cyclase AdrA | - |
| C1P79_RS10765 (2008797) | 2008797..2010006 | + | 1210 | Protein_2049 | IS3 family transposase IS629 | Transposase |
| C1P79_RS10770 (2009990) | 2009990..2011188 | + | 1199 | WP_094092420.1 | IS3 family transposase ISSd1 | Transposase |
| C1P79_RS10775 (2011315) | 2011315..2011938 | + | 624 | WP_005060548.1 | hypothetical protein | - |
| C1P79_RS10780 (2011992) | 2011992..2013164 | - | 1173 | WP_000551008.1 | acyltransferase | - |
| C1P79_RS10785 (2013513) | 2013513..2014676 | - | 1164 | WP_000051894.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| C1P79_RS10790 (2014862) | 2014862..2016018 | + | 1157 | WP_094099483.1 | IS3 family transposase ISSd1 | Transposase |
| C1P79_RS10800 (2016071) | 2016071..2016721 | + | 651 | WP_000554647.1 | hypothetical protein | - |
| C1P79_RS10805 (2016693) | 2016693..2017127 | + | 435 | WP_001223322.1 | tail fiber assembly protein | - |
| C1P79_RS10810 (2017900) | 2017900..2018949 | - | 1050 | WP_000282635.1 | acyltransferase family protein | - |
| C1P79_RS10815 (2019400) | 2019400..2020590 | + | 1191 | WP_001111520.1 | IS4 family transposase ISSfl9 | Transposase |
| C1P79_RS10820 (2020980) | 2020980..2022440 | - | 1461 | WP_000590789.1 | hypothetical protein | VF |
| C1P79_RS10825 (2022437) | 2022437..2023366 | - | 930 | WP_000703658.1 | Prophage bactoprenol glucosyl transferase | VF |
| C1P79_RS10830 (2023363) | 2023363..2023725 | - | 363 | WP_000915845.1 | Prophage bactoprenol-linked glucose translocase | VF |
| C1P79_RS10835 (2023987) | 2023987..2024343 | - | 357 | Protein_2062 | integrase | - |
| C1P79_RS10840 (2024389) | 2024389..2024742 | - | 354 | Protein_2063 | IS3 family transposase ISSfl10 | Transposase |
| C1P79_RS10845 (2024805) | 2024805..2025961 | + | 1157 | WP_094081550.1 | IS3 family transposase IS600 | Transposase |
| C1P79_RS10850 (2025994) | 2025994..2026452 | + | 459 | Protein_2065 | site-specific integrase | - |
| C1P79_RS10860 (2026657) | 2026657..2027910 | - | 1254 | WP_000893267.1 | glutamate-5-semialdehyde dehydrogenase | - |
| C1P79_RS10865 (2027922) | 2027922..2029025 | - | 1104 | WP_001285281.1 | glutamate 5-kinase | - |
| C1P79_RS10875 (2030089) | 2030089..2031144 | + | 1056 | WP_000749864.1 | phosphoporin PhoE | - |
| C1P79_RS10880 (2031183) | 2031183..2031584 | - | 402 | WP_000174678.1 | sigma factor-binding protein Crl | - |
| - (2032302) | 2032302..2032382 | - | 81 | NuclAT_8 | - | - |
| - (2032302) | 2032302..2032382 | - | 81 | NuclAT_8 | - | - |
| - (2032302) | 2032302..2032382 | - | 81 | NuclAT_8 | - | - |
| - (2032302) | 2032302..2032382 | - | 81 | NuclAT_8 | - | - |
| C1P79_RS10885 (2031642) | 2031642..2032886 | - | 1245 | WP_000189558.1 | esterase FrsA | - |
| C1P79_RS10890 (2032978) | 2032978..2033436 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| C1P79_RS10895 (2033698) | 2033698..2035155 | + | 1458 | WP_001293030.1 | cytosol nonspecific dipeptidase | - |
| C1P79_RS10900 (2035212) | 2035212..2035772 | - | 561 | Protein_2074 | peptide chain release factor H | - |
| C1P79_RS10905 (2035888) | 2035888..2036931 | - | 1044 | WP_005053205.1 | RNA ligase RtcB family protein | - |
| C1P79_RS10910 (2037177) | 2037177..2037629 | - | 453 | WP_001059860.1 | GNAT family N-acetyltransferase | - |
| C1P79_RS10915 (2037639) | 2037639..2038037 | - | 399 | WP_001263491.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| C1P79_RS10920 (2038040) | 2038040..2038333 | - | 294 | WP_000554759.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| C1P79_RS10925 (2038385) | 2038385..2039440 | - | 1056 | WP_001226172.1 | DNA polymerase IV | - |
| C1P79_RS10930 (2039511) | 2039511..2040296 | - | 786 | WP_000207560.1 | putative lateral flagellar export/assembly protein LafU | - |
| C1P79_RS10935 (2040268) | 2040268..2041980 | + | 1713 | Protein_2081 | flagellar biosynthesis protein FlhA | - |
| C1P79_RS10940 (2042197) | 2042197..2042694 | - | 498 | WP_000006251.1 | REP-associated tyrosine transposase RayT | - |
| C1P79_RS10945 (2042870) | 2042870..2043391 | - | 522 | Protein_2083 | C40 family peptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|