MGE detailed information
MGE type: IScluster/Tn MGE length: 12424 bp
Accession: NZ_CP026786 Location: 3816892..3829315 Organism: Shigella dysenteriae strain NCTC 9718 Replicon: chromosome
Accession: NZ_CP026786 Location: 3816892..3829315 Organism: Shigella dysenteriae strain NCTC 9718 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P65_RS20820 () | 3811935..3814562 | + | 2628 | WP_001281279.1 | DNA topoisomerase (ATP-hydrolyzing) subunit A | - |
| C1P65_RS20825 () | 3814798..3815139 | + | 342 | Protein_3886 | DUF2138 family protein | - |
| C1P65_RS20830 () | 3815136..3815696 | + | 561 | WP_001215754.1 | DUF1175 domain-containing protein | - |
| C1P65_RS20835 () | 3815754..3816758 | - | 1005 | Protein_3888 | tyrosine-type recombinase/integrase | - |
| C1P65_RS20840 () | 3816892..3818123 | + | 1232 | WP_134802077.1 | IS3 family transposase ISSd1 | Transposase |
| C1P65_RS20845 () | 3818176..3818586 | + | 411 | WP_000814621.1 | recombination protein NinB | - |
| C1P65_RS20850 () | 3818583..3818804 | + | 222 | WP_001254231.1 | NinE family protein | - |
| C1P65_RS20855 () | 3818801..3819109 | - | 309 | WP_000147081.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| C1P65_RS20860 () | 3819099..3819428 | - | 330 | WP_024258354.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C1P65_RS20865 () | 3819749..3820426 | + | 678 | WP_000957540.1 | phage antirepressor Ant | - |
| C1P65_RS20870 () | 3820501..3821223 | + | 723 | WP_001004003.1 | DNA-binding protein | - |
| C1P65_RS20875 () | 3821261..3821401 | + | 141 | Protein_3896 | HNH endonuclease | - |
| C1P65_RS20885 () | 3821458..3822152 | + | 695 | WP_134801589.1 | IS1 family transposase IS1N | Transposase |
| C1P65_RS20890 () | 3822168..3822488 | - | 321 | Protein_3898 | hypothetical protein | VF |
| C1P65_RS20895 () | 3822779..3823447 | - | 669 | WP_000464490.1 | arginine ABC transporter permease ArtM | - |
| C1P65_RS20900 () | 3823447..3824163 | - | 717 | WP_001001693.1 | arginine ABC transporter permease ArtQ | - |
| C1P65_RS20905 () | 3824170..3824901 | - | 732 | WP_000756570.1 | arginine ABC transporter substrate-binding protein | - |
| C1P65_RS20910 () | 3824919..3825647 | - | 729 | WP_000027205.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| C1P65_RS20915 () | 3825864..3826380 | - | 517 | Protein_3903 | lipoprotein | - |
| C1P65_RS20935 () | 3827802..3828563 | + | 762 | Protein_3905 | pentapeptide repeat-containing protein | - |
| C1P65_RS20940 () | 3828621..3829315 | + | 695 | WP_134801557.1 | IS1 family transposase IS1N | Transposase |
| C1P65_RS20945 () | 3829331..3829597 | + | 267 | Protein_3907 | hypothetical protein | - |
| C1P65_RS20950 () | 3829653..3830350 | + | 698 | Protein_3908 | IS1 family transposase | - |
| C1P65_RS20955 () | 3830366..3830629 | + | 264 | Protein_3909 | pentapeptide repeat-containing protein | - |
| C1P65_RS20960 () | 3830645..3831342 | - | 698 | Protein_3910 | IS1 family transposase | - |
| C1P65_RS20965 () | 3831398..3831805 | + | 408 | Protein_3911 | pentapeptide repeat-containing protein | - |
| C1P65_RS20975 () | 3832016..3832339 | + | 324 | WP_001160737.1 | heavy metal-binding domain-containing protein | - |
| C1P65_RS20980 () | 3832336..3833166 | + | 831 | WP_001255151.1 | N-acetylmuramoyl-L-alanine amidase AmiD | - |
| C1P65_RS20985 () | 3833163..3834176 | - | 1014 | WP_005016000.1 | NAD(P)-dependent oxidoreductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|