MGE detailed information
MGE type: Prophage MGE length: 68564 bp
Accession: NZ_CP026786 Location: 1355001..1423564 Organism: Shigella dysenteriae strain NCTC 9718 Replicon: chromosome
Accession: NZ_CP026786 Location: 1355001..1423564 Organism: Shigella dysenteriae strain NCTC 9718 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P65_RS07685 () | 1351285..1351875 | - | 591 | WP_000116409.1 | protein deglycase YajL | - |
| C1P65_RS07690 () | 1351838..1352749 | - | 912 | WP_000705855.1 | 2-dehydropantoate 2-reductase | - |
| C1P65_RS07695 () | 1352917..1353408 | + | 492 | WP_001138898.1 | nucleotide binding protein YajQ | - |
| C1P65_RS07700 () | 1353536..1354900 | - | 1365 | WP_001000964.1 | MFS transporter | - |
| C1P65_RS07705 () | 1355001..1355694 | + | 694 | Protein_1436 | IS1 family transposase | - |
| C1P65_RS07710 () | 1355791..1357266 | - | 1476 | WP_000098430.1 | muropeptide MFS transporter AmpG | - |
| C1P65_RS07715 () | 1357310..1357888 | - | 579 | WP_005020628.1 | lipoprotein | - |
| C1P65_RS07720 () | 1358193..1358510 | + | 318 | WP_000973448.1 | transcriptional regulator BolA | - |
| C1P65_RS26065 () | 1358561..1358707 | + | 147 | WP_005020631.1 | hypothetical protein | - |
| C1P65_RS07725 () | 1358854..1360152 | + | 1299 | WP_001198391.1 | trigger factor | - |
| C1P65_RS07730 () | 1360397..1361020 | + | 624 | WP_000122253.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| C1P65_RS07735 () | 1361146..1362420 | + | 1275 | WP_000130305.1 | ATP-dependent protease ATP-binding subunit ClpX | - |
| C1P65_RS07740 () | 1362608..1364962 | + | 2355 | WP_001295325.1 | endopeptidase La | - |
| C1P65_RS07745 () | 1365171..1365443 | + | 273 | WP_001043542.1 | DNA-binding protein HU-beta | - |
| C1P65_RS07750 () | 1365635..1367506 | + | 1872 | WP_134802582.1 | Foldase protein PrsA | VF |
| C1P65_RS07755 () | 1367657..1368028 | + | 372 | WP_000680314.1 | helix-hairpin-helix domain-containing protein | - |
| C1P65_RS07760 () | 1368176..1368870 | + | 695 | WP_134801584.1 | IS1 family transposase IS1N | Transposase |
| C1P65_RS07765 () | 1368908..1369306 | + | 399 | WP_001194525.1 | long-chain acyl-CoA thioesterase FadM | - |
| C1P65_RS07770 () | 1369358..1370053 | - | 696 | WP_000817241.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| C1P65_RS07775 () | 1370118..1371818 | - | 1701 | Protein_1451 | SgrR family transcriptional regulator | - |
| C1P65_RS07780 () | 1371918..1372022 | + | 105 | Protein_1452 | HAD hydrolase family protein | - |
| C1P65_RS07785 () | 1372087..1373243 | + | 1157 | Protein_1453 | IS3 family transposase ISSd1 | Transposase |
| C1P65_RS07790 () | 1373354..1374038 | + | 685 | Protein_1454 | IS1 family transposase | - |
| C1P65_RS07795 () | 1374238..1375104 | + | 867 | WP_000729153.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD | - |
| C1P65_RS07800 () | 1375106..1375315 | + | 210 | Protein_1456 | ribosome-associated protein YbcJ | - |
| C1P65_RS07805 () | 1375426..1375947 | + | 522 | Protein_1457 | metal-dependent hydrolase | - |
| C1P65_RS07810 () | 1375983..1377368 | - | 1386 | WP_000912364.1 | cysteine--tRNA ligase | - |
| C1P65_RS07815 () | 1377542..1378036 | + | 495 | WP_000256002.1 | hypothetical protein | VF |
| C1P65_RS07820 () | 1378039..1378761 | + | 723 | WP_000212265.1 | UDP-2,3-diacylglucosamine hydrolase | VF |
| C1P65_RS07825 () | 1378879..1379388 | + | 510 | WP_011378555.1 | 5-(carboxyamino)imidazole ribonucleotide mutase | - |
| C1P65_RS07830 () | 1379385..1380452 | + | 1068 | WP_000815558.1 | 5-(carboxyamino)imidazole ribonucleotide synthase | - |
| C1P65_RS07835 () | 1380591..1381235 | - | 645 | Protein_1463 | carbamate kinase | - |
| C1P65_RS07840 () | 1381292..1381989 | + | 698 | Protein_1464 | IS1 family transposase | - |
| C1P65_RS07845 () | 1382006..1382215 | - | 210 | Protein_1465 | acyl-CoA synthetase FdrA | - |
| C1P65_RS07850 () | 1382551..1383248 | - | 698 | Protein_1466 | IS1 family transposase | - |
| C1P65_RS07855 () | 1383305..1385380 | + | 2076 | Protein_1467 | hypothetical protein | VF |
| C1P65_RS07860 () | 1385367..1388339 | + | 2973 | Protein_1468 | bacteriophage adsorption protein NfrA | - |
| C1P65_RS07865 () | 1388340..1389230 | + | 891 | Protein_1469 | DUF4434 family protein | - |
| C1P65_RS07870 () | 1389413..1389739 | + | 327 | Protein_1470 | DNA-binding transcriptional regulator EnvY | - |
| C1P65_RS07880 () | 1390505..1390744 | + | 240 | Protein_1472 | DNA-binding transcriptional regulator EnvY | - |
| C1P65_RS07885 () | 1390802..1391498 | + | 697 | Protein_1473 | IS1-like element IS1N family transposase | - |
| C1P65_RS07890 () | 1391512..1391724 | + | 213 | Protein_1474 | helix-turn-helix transcriptional regulator | - |
| C1P65_RS07900 () | 1392013..1392710 | - | 698 | Protein_1475 | IS1 family transposase | - |
| C1P65_RS07905 () | 1392765..1393109 | - | 345 | Protein_1476 | hypothetical protein | VF |
| C1P65_RS07915 () | 1394091..1394408 | - | 318 | Protein_1478 | transposase | - |
| C1P65_RS07920 () | 1394584..1395333 | - | 750 | WP_011378552.1 | hypothetical protein | VF |
| C1P65_RS07925 () | 1395543..1395803 | + | 261 | WP_000729709.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| C1P65_RS07930 () | 1395806..1396084 | + | 279 | WP_000615980.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| C1P65_RS07935 () | 1396240..1396980 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| C1P65_RS07940 () | 1396951..1397718 | - | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| C1P65_RS07945 () | 1397924..1398502 | - | 579 | WP_005020694.1 | Phosphoheptose isomerase | VF |
| C1P65_RS07950 () | 1398742..1401186 | + | 2445 | Protein_1485 | Crotonobetainyl-CoA dehydrogenase | VF |
| C1P65_RS07955 () | 1401229..1401674 | - | 446 | Protein_1486 | Ivy family C-type lysozyme inhibitor | - |
| C1P65_RS07960 () | 1401855..1402625 | + | 771 | WP_001118024.1 | 2-oxoglutaramate amidase | - |
| C1P65_RS07965 () | 1402788..1403996 | - | 1209 | Protein_1488 | IS256 family transposase ISEc39 | Transposase |
| C1P65_RS07975 () | 1404766..1405050 | + | 285 | Protein_1490 | type VI secretion system tube protein Hcp | - |
| C1P65_RS07980 () | 1405071..1405223 | + | 153 | WP_001414527.1 | hypothetical protein | - |
| C1P65_RS07985 () | 1405239..1405850 | + | 612 | Protein_1492 | peptidoglycan-binding protein LysM | - |
| C1P65_RS07990 () | 1405906..1406599 | + | 694 | Protein_1493 | IS1 family transposase | - |
| C1P65_RS07995 () | 1406615..1406740 | + | 126 | Protein_1494 | peptidoglycan-binding protein | - |
| C1P65_RS08000 () | 1406743..1406997 | + | 255 | WP_005020710.1 | hypothetical protein | - |
| C1P65_RS08005 () | 1407048..1407745 | + | 698 | Protein_1496 | IS1 family transposase | - |
| C1P65_RS08015 () | 1408186..1408917 | - | 732 | WP_001301976.1 | DNA polymerase III subunit epsilon | - |
| C1P65_RS08020 () | 1408982..1409449 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| C1P65_RS08025 () | 1409446..1410168 | - | 723 | WP_005020714.1 | class I SAM-dependent methyltransferase | - |
| C1P65_RS08030 () | 1410202..1410957 | + | 756 | WP_001052711.1 | hydroxyacylglutathione hydrolase | - |
| C1P65_RS08035 () | 1411029..1412387 | + | 1359 | WP_000644696.1 | hypothetical protein | VF |
| C1P65_RS08040 () | 1412435..1413189 | - | 755 | Protein_1502 | class I SAM-dependent methyltransferase | - |
| C1P65_RS08045 () | 1413267..1414067 | - | 801 | WP_001230979.1 | endonuclease/exonuclease/phosphatase family protein | - |
| C1P65_RS08050 () | 1414308..1415222 | + | 915 | WP_000648592.1 | HTH-type transcriptional regulator ArgP | VF |
| C1P65_RS08055 () | 1415219..1416021 | - | 803 | Protein_1505 | 2,5-didehydrogluconate reductase DkgB | - |
| C1P65_RS08090 () | 1421773..1422345 | - | 573 | WP_001140169.1 | Histidine biosynthesis bifunctional protein HisB | VF |
| C1P65_RS08095 () | 1422533..1423564 | + | 1032 | WP_000594003.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| C1P65_RS08100 () | 1423557..1424210 | + | 654 | WP_001294603.1 | methionine ABC transporter permease MetI | - |
| C1P65_RS08105 () | 1424250..1425065 | + | 816 | WP_000874233.1 | methionine ABC transporter substrate-binding lipoprotein MetQ | - |
| C1P65_RS08110 () | 1425183..1425587 | + | 405 | WP_001202329.1 | Rcs stress response system protein RcsF | - |
| C1P65_RS08115 () | 1425584..1426291 | + | 708 | WP_000094004.1 | tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO | - |
| C1P65_RS08120 () | 1426402..1428120 | + | 1719 | WP_001260719.1 | proline--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|