MGE detailed information
MGE type: IScluster/Tn MGE length: 19366 bp
Accession: NZ_CP026785 Location: 17267..36632 Organism: Shigella dysenteriae strain 80-547 Replicon: plasmid unnamed
Accession: NZ_CP026785 Location: 17267..36632 Organism: Shigella dysenteriae strain 80-547 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5B79_RS24055 () | 12749..12985 | + | 237 | WP_000588956.1 | acyl carrier protein | - |
| C5B79_RS24060 () | 13192..14121 | + | 930 | WP_000227976.1 | virulence regulon transcriptional activator VirB | - |
| C5B79_RS24065 () | 15070..15849 | - | 780 | WP_024263024.1 | type III secretion system effector cysteine protease IpaJ | - |
| C5B79_RS26585 () | 16448..16585 | - | 138 | WP_001102512.1 | hypothetical protein | - |
| C5B79_RS24075 () | 17200..18193 | + | 994 | Protein_16 | IS21 family transposase IS100kyp | Transposase |
| C5B79_RS24080 () | 18385..19581 | + | 1197 | WP_011379003.1 | IS110 family transposase ISEc20 | Transposase |
| C5B79_RS26770 () | 19630..20467 | - | 838 | Protein_18 | IS4 family transposase ISEc13 | Transposase |
| C5B79_RS26600 () | 20450..20791 | - | 342 | Protein_19 | IS4 family transposase ISEc13 | Transposase |
| C5B79_RS24090 () | 20906..21706 | - | 801 | Protein_20 | IS3 family transposase | - |
| C5B79_RS24105 () | 23245..24699 | - | 1455 | WP_011379007.1 | hypothetical protein | VF |
| C5B79_RS24110 () | 25041..25214 | + | 174 | WP_011379008.1 | transposase | - |
| C5B79_RS24115 () | 25351..25875 | + | 525 | Protein_24 | IS66 family transposase ISSfl3 | Transposase |
| C5B79_RS24125 () | 25958..26230 | + | 273 | WP_000019161.1 | hypothetical protein | - |
| C5B79_RS24130 () | 26211..27353 | + | 1143 | Protein_26 | IS91 family transposase ISSbo1 | Transposase |
| C5B79_RS24135 () | 27486..28220 | + | 735 | Protein_27 | IS21 family transposase IS100kyp | Transposase |
| C5B79_RS24140 () | 28634..28936 | + | 303 | WP_162147618.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| C5B79_RS24145 () | 28927..29409 | + | 483 | WP_000405248.1 | GNAT family N-acetyltransferase | Toxin Detail |
| C5B79_RS24150 () | 29477..30000 | + | 524 | Protein_30 | IS3 family transposase ISSfl11 | Transposase |
| C5B79_RS26775 () | 30043..30726 | - | 684 | Protein_31 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| C5B79_RS26780 () | 30709..31506 | - | 798 | Protein_32 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| C5B79_RS24160 () | 31581..31853 | + | 273 | WP_000019161.1 | hypothetical protein | - |
| C5B79_RS24165 () | 31834..33042 | + | 1209 | WP_000198558.1 | IS91 family transposase ISSbo1 | Transposase |
| C5B79_RS24170 () | 34152..35009 | - | 858 | WP_000130974.1 | incFII family plasmid replication initiator RepA | - |
| C5B79_RS24175 () | 35002..35076 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| C5B79_RS24185 () | 35300..35560 | - | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| C5B79_RS24190 () | 35800..36312 | - | 513 | Protein_38 | DUF2726 domain-containing protein | - |
| C5B79_RS24195 () | 36360..37054 | + | 695 | WP_134801812.1 | IS1 family transposase | - |
| C5B79_RS24200 () | 37203..37411 | - | 209 | Protein_40 | hemolysin expression modulator Hha | - |
| C5B79_RS24205 () | 37457..37774 | - | 318 | Protein_41 | thermonuclease family protein | - |
| C5B79_RS24210 () | 37821..38518 | + | 698 | Protein_42 | IS1 family transposase | - |
| C5B79_RS24215 () | 38534..38695 | - | 162 | Protein_43 | endonuclease | - |
| C5B79_RS24225 () | 38939..39151 | - | 213 | WP_004971339.1 | ANR family transcriptional regulator | - |
| C5B79_RS24230 () | 39282..39842 | - | 561 | WP_000139365.1 | fertility inhibition protein FinO | - |
| C5B79_RS24235 () | 39897..40643 | - | 747 | WP_000205723.1 | conjugal transfer pilus acetylase TraX | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|