MGE detailed information
MGE type: Prophage MGE length: 36515 bp
Accession: NZ_CP026784 Location: 3988918..4025432 Organism: Shigella dysenteriae strain 80-547 Replicon: chromosome
Accession: NZ_CP026784 Location: 3988918..4025432 Organism: Shigella dysenteriae strain 80-547 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5B79_RS21840 () | 3984532..3987504 | + | 2973 | Protein_4080 | bacteriophage adsorption protein NfrA | - |
| C5B79_RS21845 () | 3987505..3988395 | + | 891 | Protein_4081 | DUF4434 family protein | - |
| C5B79_RS21850 () | 3988578..3988904 | + | 327 | Protein_4082 | DNA-binding transcriptional regulator EnvY | - |
| C5B79_RS21860 () | 3989670..3989909 | + | 240 | Protein_4084 | DNA-binding transcriptional regulator EnvY | - |
| C5B79_RS21865 () | 3989967..3990663 | + | 697 | Protein_4085 | IS1-like element IS1N family transposase | - |
| C5B79_RS21870 () | 3990677..3990889 | + | 213 | Protein_4086 | helix-turn-helix transcriptional regulator | - |
| C5B79_RS21880 () | 3991178..3991875 | - | 698 | Protein_4087 | IS1 family transposase | - |
| C5B79_RS21885 () | 3991930..3992274 | - | 345 | Protein_4088 | hypothetical protein | VF |
| C5B79_RS21895 () | 3993256..3993573 | - | 318 | Protein_4090 | transposase | - |
| C5B79_RS21900 () | 3993749..3994498 | - | 750 | WP_011378552.1 | hypothetical protein | VF |
| C5B79_RS21905 () | 3994708..3994968 | + | 261 | WP_000729709.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| C5B79_RS21910 () | 3994971..3995249 | + | 279 | WP_000615980.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| C5B79_RS21915 () | 3995405..3996145 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| C5B79_RS21920 () | 3996116..3996883 | - | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| C5B79_RS21925 () | 3997089..3997667 | - | 579 | WP_005020694.1 | Phosphoheptose isomerase | VF |
| C5B79_RS21930 () | 3997907..4000351 | + | 2445 | Protein_4097 | Crotonobetainyl-CoA dehydrogenase | VF |
| C5B79_RS21935 () | 4000394..4000839 | - | 446 | Protein_4098 | Ivy family C-type lysozyme inhibitor | - |
| C5B79_RS21940 () | 4001020..4001790 | + | 771 | WP_001118024.1 | 2-oxoglutaramate amidase | - |
| C5B79_RS21945 () | 4001954..4003162 | - | 1209 | Protein_4100 | IS256 family transposase ISEc39 | Transposase |
| C5B79_RS21955 () | 4003932..4004216 | + | 285 | Protein_4102 | type VI secretion system tube protein Hcp | - |
| C5B79_RS21960 () | 4004237..4004389 | + | 153 | WP_001414527.1 | hypothetical protein | - |
| C5B79_RS21965 () | 4004367..4005017 | + | 651 | Protein_4104 | peptidoglycan-binding protein LysM | - |
| C5B79_RS21970 () | 4005073..4005766 | + | 694 | Protein_4105 | IS1 family transposase | - |
| C5B79_RS21975 () | 4005782..4005907 | + | 126 | Protein_4106 | peptidoglycan-binding protein | - |
| C5B79_RS21980 () | 4005910..4006164 | + | 255 | WP_005020710.1 | hypothetical protein | - |
| C5B79_RS21985 () | 4006215..4006912 | + | 698 | Protein_4108 | IS1 family transposase | - |
| C5B79_RS21995 () | 4007353..4008084 | - | 732 | WP_001301976.1 | DNA polymerase III subunit epsilon | - |
| C5B79_RS22000 () | 4008149..4008616 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| C5B79_RS22005 () | 4008613..4009335 | - | 723 | WP_005020714.1 | class I SAM-dependent methyltransferase | - |
| C5B79_RS22010 () | 4009369..4010124 | + | 756 | WP_001052711.1 | hydroxyacylglutathione hydrolase | - |
| C5B79_RS22015 () | 4010196..4011554 | + | 1359 | WP_000644696.1 | hypothetical protein | VF |
| C5B79_RS22020 () | 4011602..4012356 | - | 755 | Protein_4114 | class I SAM-dependent methyltransferase | - |
| C5B79_RS22025 () | 4012434..4013234 | - | 801 | WP_001230979.1 | endonuclease/exonuclease/phosphatase family protein | - |
| C5B79_RS22030 () | 4013475..4014389 | + | 915 | WP_000648592.1 | HTH-type transcriptional regulator ArgP | VF |
| C5B79_RS22035 () | 4014386..4015188 | - | 803 | Protein_4117 | 2,5-didehydrogluconate reductase DkgB | - |
| C5B79_RS22070 () | 4020936..4021508 | - | 573 | WP_001140169.1 | Histidine biosynthesis bifunctional protein HisB | VF |
| C5B79_RS22075 () | 4021696..4022705 | + | 1010 | Protein_4119 | Vitamin B12 import ATP-binding protein BtuD | VF |
| C5B79_RS22080 () | 4022698..4023351 | + | 654 | WP_001294603.1 | methionine ABC transporter permease MetI | - |
| C5B79_RS22085 () | 4023391..4024206 | + | 816 | WP_134801963.1 | hypothetical protein | VF |
| C5B79_RS22090 () | 4024324..4024728 | + | 405 | WP_001202329.1 | Rcs stress response system protein RcsF | - |
| C5B79_RS22095 () | 4024725..4025432 | + | 708 | WP_000094004.1 | tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO | - |
| C5B79_RS22100 () | 4025543..4027261 | + | 1719 | WP_001260719.1 | proline--tRNA ligase | - |
| C5B79_RS22105 () | 4027314..4028138 | + | 825 | WP_005020738.1 | YaeF family permuted papain-like enzyme | - |
| C5B79_RS22110 () | 4028282..4028992 | - | 711 | WP_000239185.1 | envelope stress response activation lipoprotein NlpE | - |
| C5B79_RS22115 () | 4029006..4029428 | - | 423 | WP_000635559.1 | aminoacyl-tRNA hydrolase | - |
| C5B79_RS22120 () | 4029425..4029970 | - | 546 | WP_001185307.1 | YaeQ family protein | - |
| C5B79_RS22125 () | 4030136..4030336 | + | 201 | WP_000417058.1 | YaeP family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|