MGE detailed information
MGE type: IScluster/Tn MGE length: 12424 bp
Accession: NZ_CP026784 Location: 2030457..2042880 Organism: Shigella dysenteriae strain 80-547 Replicon: chromosome
Accession: NZ_CP026784 Location: 2030457..2042880 Organism: Shigella dysenteriae strain 80-547 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5B79_RS10910 () | 2025500..2028127 | + | 2628 | WP_001281279.1 | DNA topoisomerase (ATP-hydrolyzing) subunit A | - |
| C5B79_RS10915 () | 2028363..2028704 | + | 342 | Protein_2033 | DUF2138 family protein | - |
| C5B79_RS10920 () | 2028701..2029261 | + | 561 | WP_001215754.1 | DUF1175 domain-containing protein | - |
| C5B79_RS10925 () | 2029319..2030323 | - | 1005 | Protein_2035 | tyrosine-type recombinase/integrase | - |
| C5B79_RS10930 () | 2030457..2031688 | + | 1232 | WP_134802077.1 | IS3 family transposase ISSd1 | Transposase |
| C5B79_RS10935 () | 2031741..2032151 | + | 411 | WP_000814621.1 | recombination protein NinB | - |
| C5B79_RS10940 () | 2032148..2032369 | + | 222 | WP_001254231.1 | NinE family protein | - |
| C5B79_RS10945 () | 2032366..2032674 | - | 309 | WP_000147081.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| C5B79_RS10950 () | 2032664..2032993 | - | 330 | WP_024258354.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C5B79_RS10955 () | 2033314..2033991 | + | 678 | WP_000957540.1 | phage antirepressor Ant | - |
| C5B79_RS10960 () | 2034066..2034788 | + | 723 | WP_134802076.1 | DNA-binding protein | - |
| C5B79_RS10965 () | 2034826..2034966 | + | 141 | Protein_2043 | HNH endonuclease | - |
| C5B79_RS10975 () | 2035023..2035716 | + | 694 | Protein_2044 | IS1 family transposase | - |
| C5B79_RS10980 () | 2035732..2036052 | - | 321 | Protein_2045 | hypothetical protein | VF |
| C5B79_RS10985 () | 2036343..2037011 | - | 669 | WP_000464490.1 | arginine ABC transporter permease ArtM | - |
| C5B79_RS10990 () | 2037011..2037727 | - | 717 | WP_001001693.1 | arginine ABC transporter permease ArtQ | - |
| C5B79_RS10995 () | 2037734..2038465 | - | 732 | WP_000756570.1 | arginine ABC transporter substrate-binding protein | - |
| C5B79_RS11000 () | 2038483..2039211 | - | 729 | WP_000027205.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| C5B79_RS11005 () | 2039429..2039945 | - | 517 | Protein_2050 | lipoprotein | - |
| C5B79_RS11020 () | 2041101..2041862 | - | 762 | Protein_2052 | pentapeptide repeat-containing protein | - |
| C5B79_RS11030 () | 2042186..2042880 | + | 695 | WP_134801557.1 | IS1 family transposase IS1N | Transposase |
| C5B79_RS11035 () | 2042896..2043417 | + | 522 | Protein_2054 | pentapeptide repeat-containing protein | - |
| C5B79_RS11040 () | 2043433..2044130 | - | 698 | Protein_2055 | IS1 family transposase | - |
| C5B79_RS11045 () | 2044186..2044593 | + | 408 | Protein_2056 | pentapeptide repeat-containing protein | - |
| C5B79_RS11055 () | 2044804..2045127 | + | 324 | WP_001160737.1 | heavy metal-binding domain-containing protein | - |
| C5B79_RS11060 () | 2045124..2045954 | + | 831 | WP_134802075.1 | N-acetylmuramoyl-L-alanine amidase AmiD | - |
| C5B79_RS11065 () | 2045961..2046965 | - | 1005 | Protein_2059 | NAD(P)-dependent oxidoreductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|