MGE detailed information
MGE type: IScluster/Tn MGE length: 44564 bp
Accession: NZ_CP026783 Location: 47494..92057 Organism: Shigella dysenteriae strain 08-3380 Replicon: plasmid unnamed
Accession: NZ_CP026783 Location: 47494..92057 Organism: Shigella dysenteriae strain 08-3380 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P64_RS25540 () | 42700..43542 | - | 843 | WP_000931198.1 | polysaccharide deacetylase family protein | - |
| C1P64_RS25545 () | 43906..44022 | - | 117 | WP_004996477.1 | hypothetical protein | - |
| C1P64_RS25550 () | 44025..46937 | + | 2913 | WP_023636847.1 | ankyrin repeat protein | - |
| C1P64_RS25555 () | 46967..47291 | - | 325 | Protein_51 | IS3 family transposase | - |
| C1P64_RS26895 () | 47289..47480 | + | 192 | Protein_52 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P64_RS25565 () | 47494..48840 | - | 1347 | Protein_53 | IS4 family transposase IS4 | Transposase |
| C1P64_RS26900 () | 48903..49187 | - | 285 | Protein_54 | IS66 family transposase ISCro1 | Transposase |
| C1P64_RS25575 () | 49526..50116 | - | 591 | WP_000705601.1 | Protein kinase OspG | VF |
| C1P64_RS27120 () | 50145..50371 | - | 227 | Protein_56 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C1P64_RS25585 () | 50368..50637 | - | 270 | WP_000079957.1 | hypothetical protein | - |
| C1P64_RS25590 () | 50845..52483 | - | 1639 | Protein_58 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| C1P64_RS25605 () | 53519..53614 | - | 96 | Protein_60 | transposase domain-containing protein | - |
| C1P64_RS25610 () | 53650..53955 | - | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C1P64_RS25615 () | 53957..54175 | - | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C1P64_RS25625 () | 54415..55108 | + | 694 | Protein_63 | IS1 family transposase | - |
| C1P64_RS25630 () | 55484..56574 | - | 1091 | Protein_64 | IS66 family transposase ISEc49 | Transposase |
| C1P64_RS25635 () | 56582..57150 | + | 569 | Protein_65 | plasmid segregation protein ParM | - |
| C1P64_RS25640 () | 57153..57518 | + | 366 | WP_000361390.1 | plasmid partitioning/stability family protein | - |
| C1P64_RS26905 () | 57610..57747 | + | 138 | WP_000766699.1 | hypothetical protein | - |
| C1P64_RS25645 () | 57879..58154 | - | 276 | WP_000421263.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C1P64_RS25650 () | 58154..58438 | - | 285 | WP_001178088.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| C1P64_RS25665 () | 59190..59400 | + | 211 | Protein_70 | peptidoglycan-binding protein | - |
| C1P64_RS25670 () | 59500..59685 | - | 186 | Protein_71 | IS21 family transposase IS100 | Transposase |
| C1P64_RS25680 () | 60021..60490 | + | 470 | Protein_72 | IS1 family transposase IS1N | Transposase |
| C1P64_RS26910 () | 60649..61287 | + | 639 | WP_000607008.1 | hypothetical protein | VF |
| C1P64_RS25690 () | 61402..61935 | + | 534 | Protein_74 | transposase | - |
| C1P64_RS26915 () | 61990..62130 | + | 141 | Protein_75 | IS3 family transposase IS2 | Transposase |
| C1P64_RS25695 () | 62195..62595 | + | 401 | Protein_76 | IS3 family transposase ISSfl10 | Transposase |
| C1P64_RS25700 () | 62651..63348 | + | 698 | Protein_77 | IS1 family transposase | - |
| C1P64_RS25705 () | 63364..64128 | + | 765 | Protein_78 | IS3 family transposase ISSd1 | Transposase |
| C1P64_RS27125 () | 64097..64172 | - | 76 | Protein_79 | aspartate oxidase | - |
| C1P64_RS25710 () | 64173..64496 | - | 324 | Protein_80 | DUF1281 domain-containing protein | - |
| C1P64_RS25720 () | 64935..65894 | + | 960 | WP_000921950.1 | plasmid segregation protein ParM | - |
| C1P64_RS25725 () | 65894..66289 | + | 396 | WP_000445931.1 | plasmid partitioning/stability family protein | - |
| C1P64_RS25730 () | 66469..66849 | + | 381 | WP_005015412.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| C1P64_RS25735 () | 66895..67739 | + | 845 | WP_134802192.1 | IS5 family transposase ISSfl7 | Transposase |
| C1P64_RS25745 () | 67888..69342 | - | 1455 | WP_000701102.1 | hypothetical protein | VF |
| C1P64_RS25750 () | 69767..70611 | + | 845 | Protein_86 | IS5 family transposase ISSfl7 | Transposase |
| C1P64_RS25755 () | 70781..71530 | - | 750 | WP_000828660.1 | phosphatase PAP2 family protein | - |
| C1P64_RS25765 () | 72704..74356 | - | 1653 | WP_000612524.1 | bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA | - |
| C1P64_RS25770 () | 74697..75906 | - | 1210 | Protein_90 | IS3 family transposase IS629 | Transposase |
| C1P64_RS25775 () | 75972..76139 | - | 168 | Protein_91 | IS3 family transposase ISKpn38 | Transposase |
| C1P64_RS25780 () | 76180..76521 | - | 342 | Protein_92 | IS4 family transposase ISEc13 | Transposase |
| C1P64_RS25785 () | 76500..77206 | - | 707 | Protein_93 | IS256 family transposase IS1414 | Transposase |
| C1P64_RS25795 () | 77409..78102 | + | 694 | Protein_94 | IS1-like element IS1N family transposase | - |
| C1P64_RS25800 () | 78168..79865 | - | 1698 | WP_005015229.1 | hypothetical protein | VF |
| C1P64_RS25805 () | 79941..80075 | + | 135 | Protein_96 | IS1 family transposase | - |
| C1P64_RS25810 () | 80174..81586 | - | 1413 | WP_011379035.1 | hypothetical protein | VF |
| C1P64_RS25820 () | 82597..83154 | + | 558 | Protein_98 | IS110 family transposase ISEc11 | Transposase |
| C1P64_RS25825 () | 83201..84410 | + | 1210 | Protein_99 | IS3 family transposase IS629 | Transposase |
| C1P64_RS25835 () | 84605..85299 | + | 695 | WP_134802015.1 | IS1 family transposase | - |
| C1P64_RS25840 () | 85314..85750 | - | 437 | Protein_101 | IS3 family transposase ISSfl11 | Transposase |
| C1P64_RS26920 () | 85789..85941 | + | 153 | WP_011114782.1 | hypothetical protein | - |
| C1P64_RS27130 () | 86299..86442 | + | 144 | Protein_103 | IS1 family transposase | - |
| C1P64_RS25850 () | 86588..86854 | + | 267 | WP_000957712.1 | hypothetical protein | VF |
| C1P64_RS25855 () | 87242..88969 | + | 1728 | WP_024263018.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| C1P64_RS25860 () | 88999..89154 | - | 156 | Protein_106 | IS256 family transposase ISEc39 | Transposase |
| C1P64_RS25875 () | 90450..91147 | + | 698 | Protein_108 | IS1 family transposase | - |
| C1P64_RS25880 () | 91163..92057 | + | 895 | Protein_109 | IS3 family transposase IS600 | Transposase |
| C1P64_RS25885 () | 92102..92351 | + | 250 | Protein_110 | IS1 family transposase | - |
| C1P64_RS25890 () | 92368..92547 | - | 180 | Protein_111 | transposase | - |
| C1P64_RS25895 () | 92877..94574 | + | 1698 | WP_134801822.1 | T3SS effector E3 ubiquitin-protein ligase IpaH7.8 | - |
| C1P64_RS25900 () | 95002..96726 | + | 1725 | WP_011379044.1 | T3SS effector E3 ubiquitin-protein ligase IpaH4.5 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|