NZ_CP0267831..183210

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 183210 bp
Accession: NZ_CP026783        Location: 1..183210         Organism: Shigella dysenteriae strain 08-3380       Replicon: plasmid unnamed


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
C1P64_RS25285 () 36..965 + 930 WP_000227976.1 virulence regulon transcriptional activator VirB -
C1P64_RS25290 () 1915..2694 - 780 WP_024263024.1 Cysteine protease IpaJ VF
C1P64_RS25295 () 4046..5039 + 994 Protein_2 IS21 family transposase IS100kyp Transposase
C1P64_RS25300 () 5231..6427 + 1197 WP_011379003.1 IS110 family transposase ISEc20 Transposase
C1P64_RS27095 () 6476..7313 - 838 Protein_4 IS4 family transposase ISEc13 Transposase
C1P64_RS26885 () 7296..7637 - 342 Protein_5 IS4 family transposase ISEc13 Transposase
C1P64_RS25310 () 7752..8552 - 801 Protein_6 IS3 family transposase -
C1P64_RS25325 () 10091..11545 - 1455 WP_011379007.1 hypothetical protein VF
C1P64_RS25330 () 11886..12059 + 174 WP_011379008.1 transposase -
C1P64_RS25340 () 12196..12720 + 525 Protein_10 IS66 family transposase ISSfl3 Transposase
C1P64_RS25350 () 12803..13075 + 273 WP_000019161.1 hypothetical protein -
C1P64_RS25355 () 13056..14198 + 1143 Protein_12 IS91 family transposase ISSbo1 Transposase
C1P64_RS25360 () 14331..15065 + 735 Protein_13 IS21 family transposase IS100kyp Transposase
C1P64_RS25365 () 15479..15781 + 303 WP_162147618.1 DUF1778 domain-containing protein Antitoxin Detail
C1P64_RS25370 () 15772..16254 + 483 WP_000405248.1 GNAT family N-acetyltransferase Toxin Detail
C1P64_RS25375 () 16322..16845 + 524 Protein_16 IS3 family transposase ISSfl11 Transposase
C1P64_RS27100 () 16888..17571 - 684 Protein_17 putative E3 ubiquitin-protein ligase ipaH7.8 VF
C1P64_RS27105 () 17554..18351 - 798 Protein_18 putative E3 ubiquitin-protein ligase ipaH7.8 VF
C1P64_RS25385 () 18426..18698 + 273 WP_000019161.1 hypothetical protein -
C1P64_RS25390 () 18679..19887 + 1209 WP_000198558.1 IS91 family transposase ISSbo1 Transposase
C1P64_RS25395 () 20997..21854 - 858 WP_000130974.1 incFII family plasmid replication initiator RepA -
C1P64_RS25400 () 21847..21921 - 75 WP_001365705.1 RepA leader peptide Tap -
C1P64_RS25410 () 22145..22405 - 261 WP_000083819.1 replication regulatory protein RepA -
C1P64_RS25415 () 22645..23157 - 513 Protein_24 DUF2726 domain-containing protein -
C1P64_RS25425 () 23205..23899 + 695 WP_134801812.1 IS1 family transposase -
C1P64_RS25430 () 24048..24191 - 144 Protein_26 transcriptional regulator -
C1P64_RS25440 () 24248..24942 + 695 WP_134801577.1 IS1-like element IS1N family transposase -
C1P64_RS27110 () 24956..25030 - 75 Protein_28 transcriptional regulator -
C1P64_RS25445 () 25076..25393 - 318 Protein_29 thermonuclease family protein -
C1P64_RS25450 () 25440..26137 + 698 Protein_30 IS1 family transposase -
C1P64_RS25455 () 26153..26314 - 162 Protein_31 endonuclease -
C1P64_RS25465 () 26558..26770 - 213 WP_004971339.1 ANR family transcriptional regulator -
C1P64_RS25470 () 26901..27461 - 561 WP_000139365.1 fertility inhibition protein FinO -
C1P64_RS25475 () 27516..28262 - 747 WP_000205723.1 conjugal transfer pilus acetylase TraX -
C1P64_RS25480 () 28282..33138 - 4857 WP_005015506.1 Multifunctional conjugation protein TraI Relaxase
C1P64_RS25485 () 33125..33544 - 420 WP_011379018.1 Multifunctional conjugation protein TraI Relaxase
C1P64_RS25490 () 33626..33853 + 228 WP_000450529.1 toxin-antitoxin system antitoxin VapB Antitoxin Detail
C1P64_RS25495 () 33853..34251 + 399 WP_000911312.1 tRNA(fMet)-specific endonuclease VapC Toxin Detail
C1P64_RS25500 () 34260..36042 - 1783 Protein_39 type IV conjugative transfer system coupling protein TraD -
C1P64_RS25505 () 36108..37264 + 1157 WP_134802193.1 IS3 family transposase ISSd1 Transposase
C1P64_RS25510 () 37305..38063 - 759 Protein_41 IS4 family transposase IS421 Transposase
C1P64_RS25515 () 38236..38658 + 423 Protein_42 hypothetical protein -
C1P64_RS27115 () 38803..38934 - 132 Protein_43 IS66 family transposase ISCro1 Transposase
C1P64_RS25520 () 38932..39447 - 516 Protein_44 IS66 family transposase ISCro1 Transposase
C1P64_RS25525 () 39645..40589 - 945 WP_004996485.1 Lipid A biosynthesis myristoyltransferase 2 VF
C1P64_RS25530 () 40654..41604 - 951 WP_004970430.1 virulence factor VirK -
C1P64_RS25535 () 41609..42697 - 1089 WP_005015483.1 putative hexosyltransferase CapU -
C1P64_RS25540 () 42700..43542 - 843 WP_000931198.1 polysaccharide deacetylase family protein -
C1P64_RS25545 () 43906..44022 - 117 WP_004996477.1 hypothetical protein -
C1P64_RS25550 () 44025..46937 + 2913 WP_023636847.1 ankyrin repeat protein -
C1P64_RS25555 () 46967..47291 - 325 Protein_51 IS3 family transposase -
C1P64_RS26895 () 47289..47480 + 192 Protein_52 IS66 family insertion sequence element accessory protein TnpB -
C1P64_RS25565 () 47494..48840 - 1347 Protein_53 IS4 family transposase IS4 Transposase
C1P64_RS26900 () 48903..49187 - 285 Protein_54 IS66 family transposase ISCro1 Transposase
C1P64_RS25575 () 49526..50116 - 591 WP_000705601.1 Protein kinase OspG VF
C1P64_RS27120 () 50145..50371 - 227 Protein_56 type II toxin-antitoxin system RelE/ParE family toxin -
C1P64_RS25585 () 50368..50637 - 270 WP_000079957.1 hypothetical protein -
C1P64_RS25590 () 50845..52483 - 1639 Protein_58 E3 ubiquitin-protein ligase ipaH9.8 VF
C1P64_RS25605 () 53519..53614 - 96 Protein_60 transposase domain-containing protein -
C1P64_RS25610 () 53650..53955 - 306 WP_001159860.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
C1P64_RS25615 () 53957..54175 - 219 WP_000813626.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
C1P64_RS25625 () 54415..55108 + 694 Protein_63 IS1 family transposase -
C1P64_RS25630 () 55484..56574 - 1091 Protein_64 IS66 family transposase ISEc49 Transposase
C1P64_RS25635 () 56582..57150 + 569 Protein_65 plasmid segregation protein ParM -
C1P64_RS25640 () 57153..57518 + 366 WP_000361390.1 plasmid partitioning/stability family protein -
C1P64_RS26905 () 57610..57747 + 138 WP_000766699.1 hypothetical protein -
C1P64_RS25645 () 57879..58154 - 276 WP_000421263.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
C1P64_RS25650 () 58154..58438 - 285 WP_001178088.1 ribbon-helix-helix domain-containing protein Antitoxin Detail
C1P64_RS25665 () 59190..59400 + 211 Protein_70 peptidoglycan-binding protein -
C1P64_RS25670 () 59500..59685 - 186 Protein_71 IS21 family transposase IS100 Transposase
C1P64_RS25680 () 60021..60490 + 470 Protein_72 IS1 family transposase IS1N Transposase
C1P64_RS26910 () 60649..61287 + 639 WP_000607008.1 hypothetical protein VF
C1P64_RS25690 () 61402..61935 + 534 Protein_74 transposase -
C1P64_RS26915 () 61990..62130 + 141 Protein_75 IS3 family transposase IS2 Transposase
C1P64_RS25695 () 62195..62595 + 401 Protein_76 IS3 family transposase ISSfl10 Transposase
C1P64_RS25700 () 62651..63348 + 698 Protein_77 IS1 family transposase -
C1P64_RS25705 () 63364..64128 + 765 Protein_78 IS3 family transposase ISSd1 Transposase
C1P64_RS27125 () 64097..64172 - 76 Protein_79 aspartate oxidase -
C1P64_RS25710 () 64173..64496 - 324 Protein_80 DUF1281 domain-containing protein -
C1P64_RS25720 () 64935..65894 + 960 WP_000921950.1 plasmid segregation protein ParM -
C1P64_RS25725 () 65894..66289 + 396 WP_000445931.1 plasmid partitioning/stability family protein -
C1P64_RS25730 () 66469..66849 + 381 WP_005015412.1 type II toxin-antitoxin system RelB/DinJ family antitoxin -
C1P64_RS25735 () 66895..67739 + 845 WP_134802192.1 IS5 family transposase ISSfl7 Transposase
C1P64_RS25745 () 67888..69342 - 1455 WP_000701102.1 hypothetical protein VF
C1P64_RS25750 () 69767..70611 + 845 Protein_86 IS5 family transposase ISSfl7 Transposase
C1P64_RS25755 () 70781..71530 - 750 WP_000828660.1 phosphatase PAP2 family protein -
C1P64_RS25765 () 72704..74356 - 1653 WP_000612524.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA -
C1P64_RS25770 () 74697..75906 - 1210 Protein_90 IS3 family transposase IS629 Transposase
C1P64_RS25775 () 75972..76139 - 168 Protein_91 IS3 family transposase ISKpn38 Transposase
C1P64_RS25780 () 76180..76521 - 342 Protein_92 IS4 family transposase ISEc13 Transposase
C1P64_RS25785 () 76500..77206 - 707 Protein_93 IS256 family transposase IS1414 Transposase
C1P64_RS25795 () 77409..78102 + 694 Protein_94 IS1-like element IS1N family transposase -
C1P64_RS25800 () 78168..79865 - 1698 WP_005015229.1 hypothetical protein VF
C1P64_RS25805 () 79941..80075 + 135 Protein_96 IS1 family transposase -
C1P64_RS25810 () 80174..81586 - 1413 WP_011379035.1 hypothetical protein VF
C1P64_RS25820 () 82597..83154 + 558 Protein_98 IS110 family transposase ISEc11 Transposase
C1P64_RS25825 () 83201..84410 + 1210 Protein_99 IS3 family transposase IS629 Transposase
C1P64_RS25835 () 84605..85299 + 695 WP_134802015.1 IS1 family transposase -
C1P64_RS25840 () 85314..85750 - 437 Protein_101 IS3 family transposase ISSfl11 Transposase
C1P64_RS26920 () 85789..85941 + 153 WP_011114782.1 hypothetical protein -
C1P64_RS27130 () 86299..86442 + 144 Protein_103 IS1 family transposase -
C1P64_RS25850 () 86588..86854 + 267 WP_000957712.1 hypothetical protein VF
C1P64_RS25855 () 87242..88969 + 1728 WP_024263018.1 putative E3 ubiquitin-protein ligase ipaH7.8 VF
C1P64_RS25860 () 88999..89154 - 156 Protein_106 IS256 family transposase ISEc39 Transposase
C1P64_RS25875 () 90450..91147 + 698 Protein_108 IS1 family transposase -
C1P64_RS25880 () 91163..92057 + 895 Protein_109 IS3 family transposase IS600 Transposase
C1P64_RS25885 () 92102..92351 + 250 Protein_110 IS1 family transposase -
C1P64_RS25890 () 92368..92547 - 180 Protein_111 transposase -
C1P64_RS25895 () 92877..94574 + 1698 WP_134801822.1 putative E3 ubiquitin-protein ligase ipaH7.8 VF
C1P64_RS25900 () 95002..96726 + 1725 WP_011379044.1 putative E3 ubiquitin-protein ligase ipaH4.5 VF
C1P64_RS25905 () 96778..97999 + 1222 Protein_114 IS3 family transposase IS629 Transposase
C1P64_RS25910 () 98024..98203 + 180 Protein_115 IS66 family transposase IS679 Transposase
C1P64_RS25925 () 98779..99906 + 1128 Protein_116 group II intron reverse transcriptase/maturase -
C1P64_RS25930 () 99989..100168 + 180 Protein_117 transposase domain-containing protein -
C1P64_RS25935 () 100198..100680 - 483 Protein_118 IS110 family transposase ISSde4 Transposase
C1P64_RS25940 () 100936..101916 - 981 WP_000431558.1 ParB/RepB/Spo0J family partition protein -
C1P64_RS25945 () 101916..103115 - 1200 WP_000200286.1 AAA family ATPase -
C1P64_RS25955 () 103437..103775 - 339 Protein_121 IS1 family transposase -
C1P64_RS25960 () 103842..104624 - 783 WP_075335727.1 IS21 family transposase IS100kyp Transposase
C1P64_RS25965 () 104621..105631 - 1011 Protein_123 IS21 family transposase IS100kyp Transposase
C1P64_RS25970 () 105718..106079 - 362 Protein_124 IS1 family transposase IS1N Transposase
C1P64_RS25980 () 107772..107894 + 123 Protein_126 transposase domain-containing protein -
C1P64_RS25985 () 108156..108722 - 567 WP_024263014.1 hypothetical protein VF
C1P64_RS26925 () 109004..109318 - 315 WP_011114726.1 hypothetical protein -
C1P64_RS26005 () 109830..110506 - 677 Protein_129 hypothetical protein VF
C1P64_RS26010 () 110878..111015 - 138 Protein_130 IS630 family transposase -
C1P64_RS26015 () 111097..111395 - 299 Protein_131 transposase -
C1P64_RS26020 () 111984..112143 - 160 Protein_132 IS3 family transposase -
C1P64_RS26025 () 112147..113376 - 1230 Protein_133 IS66 family transposase IS679 Transposase
C1P64_RS26030 () 113396..113743 - 348 WP_000622997.1 IS66 family transposase ISCro1 Transposase
C1P64_RS26035 () 113743..114390 - 648 Protein_135 IS66 family transposase ISCro1 Transposase
C1P64_RS26040 () 114421..114708 - 288 WP_001082153.1 hypothetical protein -
C1P64_RS26045 () 114786..115215 + 430 Protein_137 IS91 family transposase IS91 Transposase
C1P64_RS26930 () 115402..115639 + 238 Protein_138 ATP-binding protein -
C1P64_RS26055 () 116065..116643 + 579 WP_000868555.1 hypothetical protein -
C1P64_RS26060 () 116752..116998 - 247 Protein_140 IS1 family transposase -
C1P64_RS26065 () 116994..117557 + 564 Protein_141 transposase -
C1P64_RS26070 () 117709..118428 + 720 WP_001121864.1 Phosphothreonine lyase OspF VF
C1P64_RS26075 () 118603..119831 + 1229 WP_171764954.1 IS3 family transposase IS2 Transposase
C1P64_RS26080 () 120196..121905 + 1710 WP_024263012.1 hypothetical protein VF
C1P64_RS26090 () 122595..123280 + 686 Protein_145 IS3 family transposase ISSfl11 Transposase
C1P64_RS26095 () 123297..123815 + 519 Protein_146 IS66 family transposase IS679 Transposase
C1P64_RS26110 () 125042..126004 + 963 Protein_148 hypothetical protein VF
C1P64_RS26120 () 126345..127085 - 741 WP_000850660.1 PAP2 family phosphatase PhoN2 -
C1P64_RS26125 () 127414..128280 - 867 WP_001046940.1 hypothetical protein VF
C1P64_RS26130 () 128530..128649 - 120 Protein_151 Tn3 family transposase TnpA_ISNpu13 Transposase
C1P64_RS26140 () 128893..129139 + 247 Protein_152 IS3 family transposase -
C1P64_RS26150 () 129701..130648 - 948 WP_011378982.1 Outer membrane protease IcsP VF
C1P64_RS26155 () 132029..132181 - 153 Protein_154 IS3 family transposase -
C1P64_RS26160 () 132237..132929 + 693 WP_000625266.1 hypothetical protein VF
C1P64_RS26165 () 133066..133265 - 200 Protein_156 transposase -
C1P64_RS26170 () 133338..133811 - 474 WP_001217111.1 hypothetical protein -
C1P64_RS26175 () 134359..135216 - 858 WP_000131021.1 incFII family plasmid replication initiator RepA -
C1P64_RS26180 () 135209..135283 - 75 WP_001365705.1 RepA leader peptide Tap -
C1P64_RS26190 () 135518..135778 - 261 WP_000078111.1 replication regulatory protein RepA -
C1P64_RS26195 () 135850..136005 - 156 Protein_161 IS110 family transposase ISEc21 Transposase
C1P64_RS26200 () 136001..136141 + 141 Protein_162 IS21 family transposase -
C1P64_RS26205 () 136180..136758 - 579 Protein_163 IS3 family transposase IS629 Transposase
C1P64_RS26210 () 136682..136873 - 192 WP_134801818.1 IS3 family transposase IS629 Transposase
C1P64_RS26215 () 136937..138165 + 1229 WP_088895425.1 IS3 family transposase IS2 Transposase
C1P64_RS26220 () 138391..141699 - 3309 WP_001071790.1 Outer membrane protein IcsA autotransporter VF
C1P64_RS26230 () 141973..142667 + 695 WP_141106358.1 IS1 family transposase -
C1P64_RS26235 () 143002..144204 + 1203 WP_001195011.1 Cysteine protease-like VirA VF
C1P64_RS26240 () 144382..145066 + 685 Protein_169 IS3 family transposase -
C1P64_RS26245 () 145068..145434 + 367 Protein_170 IS3 family transposase IS629 Transposase
C1P64_RS26935 () 145437..145835 + 399 Protein_171 group II intron reverse transcriptase/maturase -
C1P64_RS26260 () 146588..146845 + 258 WP_023592977.1 hypothetical protein -
C1P64_RS26265 () 147001..147430 + 430 Protein_173 IS91 family transposase ISEc37 Transposase
C1P64_RS26270 () 147611..147760 + 150 Protein_174 transposase -
C1P64_RS26275 () 147787..148996 - 1210 Protein_175 IS3 family transposase IS629 Transposase
C1P64_RS26280 () 149049..149510 + 462 Protein_176 ISL3 family transposase ISKox3 Transposase
C1P64_RS26285 () 149534..149941 + 408 Protein_177 IS110 family transposase -
C1P64_RS26290 () 150525..151241 + 717 WP_005059327.1 hypothetical protein -
C1P64_RS26940 () 151792..152196 + 405 WP_038815643.1 hypothetical protein -
C1P64_RS26305 () 152259..152838 + 580 Protein_180 IS3 family transposase IS3H Transposase
C1P64_RS26310 () 152835..153688 + 854 Protein_181 IS3 family transposase ISSfl11 Transposase
C1P64_RS26315 () 154295..154537 - 243 WP_010921676.1 hypothetical protein -
C1P64_RS26320 () 154550..155579 - 1030 Protein_183 Surface presentation of antigens protein SpaS VF
C1P64_RS26325 () 155586..156356 - 771 WP_000355395.1 Surface presentation of antigens protein SpaR VF
C1P64_RS26330 () 156356..156616 - 261 WP_001280546.1 hypothetical protein VF
C1P64_RS26335 () 156631..157281 - 651 WP_000947538.1 Surface presentation of antigens protein SpaP VF
C1P64_RS26340 () 157286..158167 - 882 WP_000944986.1 Surface presentation of antigens protein SpaO VF
C1P64_RS26345 () 158161..159039 - 879 WP_001162452.1 Surface presentation of antigens protein SpaN VF
C1P64_RS26350 () 159026..159364 - 339 WP_024263028.1 hypothetical protein VF
C1P64_RS26355 () 159457..160749 - 1293 WP_000122614.1 putative ATP synthase SpaL/MxiB VF
C1P64_RS26360 () 160753..161154 - 402 WP_011378994.1 Surface presentation of antigens protein SpaK VF
C1P64_RS26365 () 161167..163227 - 2061 WP_024263027.1 Protein MxiA VF
C1P64_RS26370 () 163240..164307 - 1068 WP_000887827.1 Protein MxiC VF
C1P64_RS26375 () 164326..166026 - 1701 WP_000714402.1 Outer membrane protein MxiD VF
C1P64_RS26380 () 166013..166645 - 633 WP_000398257.1 Invasion protein InvF VF
C1P64_RS26385 () 166775..167203 - 429 WP_011378996.1 Lipoprotein MxiM VF
C1P64_RS26390 () 167187..167594 - 408 WP_000609864.1 hypothetical protein VF
C1P64_RS26395 () 167587..168282 - 696 WP_011378997.1 Oxygen-regulated invasion protein OrgB VF
C1P64_RS26400 () 168224..168751 - 528 WP_141106359.1 Oxygen-regulated invasion protein OrgA VF
C1P64_RS26405 () 168748..169473 - 726 WP_000621939.1 Lipoprotein PrgK VF
C1P64_RS26410 () 169479..169772 - 294 WP_001106824.1 hypothetical protein VF
C1P64_RS26415 () 169785..170036 - 252 WP_011378999.1 Protein MxiH VF
C1P64_RS26420 () 170044..171159 - 1116 WP_134802189.1 Protein MxiG VF
C1P64_RS26425 () 171168..171626 - 459 WP_000086107.1 hypothetical protein VF
C1P64_RS26430 () 171626..171988 - 363 WP_000389733.1 Chaperone protein IpgE VF
C1P64_RS26435 () 171998..173614 - 1617 WP_000548332.1 Inositol phosphate phosphatase IpgD VF
C1P64_RS26445 () 173928..175412 + 1485 WP_000601046.1 hypothetical protein VF
C1P64_RS26450 () 175425..175814 + 390 WP_010921664.1 hypothetical protein VF
C1P64_RS26455 () 175830..176456 + 627 WP_001166524.1 hypothetical protein VF
C1P64_RS26460 () 176514..176981 + 468 WP_000055835.1 Chaperone protein IpgC VF
C1P64_RS26465 () 176987..178729 + 1743 WP_000552051.1 Invasin IpaB VF
C1P64_RS26470 () 178749..179840 + 1092 WP_000405469.1 Invasin IpaC VF
C1P64_RS26475 () 179891..180889 + 999 WP_001028028.1 Invasin IpaD VF
C1P64_RS26480 () 180898..182799 + 1902 WP_011379000.1 Invasin IpaA VF
C1P64_RS26485 () 182803..183039 + 237 WP_000588956.1 Acyl carrier protein VF

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance