MGE detailed information
MGE type: Prophage MGE length: 25473 bp
Accession: NZ_CP026782 Location: 2427097..2452569 Organism: Shigella dysenteriae strain 08-3380 Replicon: chromosome
Accession: NZ_CP026782 Location: 2427097..2452569 Organism: Shigella dysenteriae strain 08-3380 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P64_RS13320 () | 2426298..2427100 | + | 803 | Protein_2429 | 2,5-didehydrogluconate reductase DkgB | - |
| C1P64_RS13325 () | 2427097..2428011 | - | 915 | WP_000648592.1 | HTH-type transcriptional regulator DmlR | VF |
| C1P64_RS13330 () | 2428252..2429052 | + | 801 | WP_001230979.1 | endonuclease/exonuclease/phosphatase family protein | - |
| C1P64_RS13335 () | 2429130..2429884 | + | 755 | Protein_2432 | class I SAM-dependent methyltransferase | - |
| C1P64_RS13340 () | 2429932..2431290 | - | 1359 | WP_000644696.1 | Membrane-bound lytic murein transglycosylase D | VF |
| C1P64_RS13345 () | 2431362..2432117 | - | 756 | WP_001052711.1 | hydroxyacylglutathione hydrolase | - |
| C1P64_RS13350 () | 2432151..2432873 | + | 723 | WP_005020714.1 | class I SAM-dependent methyltransferase | - |
| C1P64_RS13355 () | 2432870..2433337 | - | 468 | WP_000917883.1 | ribonuclease HI | - |
| C1P64_RS13360 () | 2433402..2434133 | + | 732 | WP_001301976.1 | DNA polymerase III subunit epsilon | - |
| C1P64_RS13370 () | 2434574..2435271 | - | 698 | Protein_2438 | IS1 family transposase | - |
| C1P64_RS13375 () | 2435322..2435576 | - | 255 | WP_005020710.1 | hypothetical protein | - |
| C1P64_RS13380 () | 2435579..2435704 | - | 126 | Protein_2440 | peptidoglycan-binding protein | - |
| C1P64_RS13385 () | 2435720..2436413 | - | 694 | Protein_2441 | IS1 family transposase | - |
| C1P64_RS13395 () | 2436469..2437119 | - | 651 | Protein_2442 | peptidoglycan-binding protein LysM | - |
| C1P64_RS13400 () | 2437097..2437249 | - | 153 | WP_001414527.1 | hypothetical protein | - |
| C1P64_RS13405 () | 2437270..2437554 | - | 285 | Protein_2444 | type VI secretion system tube protein Hcp | - |
| C1P64_RS13415 () | 2437613..2438307 | + | 695 | WP_134802583.1 | IS1 family transposase IS1N | Transposase |
| C1P64_RS13420 () | 2438324..2439532 | + | 1209 | Protein_2446 | IS256 family transposase ISEc39 | Transposase |
| C1P64_RS13425 () | 2439696..2440466 | - | 771 | WP_001118024.1 | 2-oxoglutaramate amidase | - |
| C1P64_RS13430 () | 2440647..2441093 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| C1P64_RS13435 () | 2441136..2443580 | - | 2445 | Protein_2449 | Acyl-coenzyme A dehydrogenase | VF |
| C1P64_RS13440 () | 2443820..2444398 | + | 579 | WP_005020694.1 | Phosphoheptose isomerase | VF |
| C1P64_RS13445 () | 2444604..2445371 | + | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| C1P64_RS13450 () | 2445342..2446082 | - | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| C1P64_RS13455 () | 2446238..2446516 | - | 279 | WP_000615980.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| C1P64_RS13460 () | 2446519..2446779 | - | 261 | WP_000729709.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| C1P64_RS13465 () | 2446989..2447738 | + | 750 | WP_011378552.1 | Murein DD-endopeptidase MepH | VF |
| C1P64_RS13470 () | 2447914..2448231 | + | 318 | Protein_2456 | transposase | - |
| C1P64_RS13480 () | 2448288..2448982 | + | 695 | WP_134801543.1 | IS1 family transposase IS1N | Transposase |
| C1P64_RS13485 () | 2449213..2449557 | + | 345 | Protein_2458 | putative fimbrial chaperone SfmC | VF |
| C1P64_RS13490 () | 2449612..2450309 | + | 698 | Protein_2459 | IS1 family transposase | - |
| C1P64_RS13500 () | 2450598..2450810 | - | 213 | Protein_2460 | helix-turn-helix transcriptional regulator | - |
| C1P64_RS13505 () | 2450824..2451520 | - | 697 | Protein_2461 | IS1-like element IS1N family transposase | - |
| C1P64_RS13515 () | 2451578..2451817 | - | 240 | Protein_2462 | DNA-binding transcriptional regulator EnvY | - |
| C1P64_RS13520 () | 2451875..2452569 | + | 695 | WP_134801557.1 | IS1 family transposase IS1N | Transposase |
| C1P64_RS13525 () | 2452583..2452909 | - | 327 | Protein_2464 | DNA-binding transcriptional regulator EnvY | - |
| C1P64_RS13530 () | 2453092..2453982 | - | 891 | Protein_2465 | DUF4434 family protein | - |
| C1P64_RS13535 () | 2453983..2456955 | - | 2973 | Protein_2466 | bacteriophage adsorption protein NfrA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|