MGE detailed information
MGE type: Prophage MGE length: 61470 bp
Accession: NZ_CP026780 Location: 4005369..4066838 Organism: Shigella dysenteriae strain 53-3937 Replicon: chromosome
Accession: NZ_CP026780 Location: 4005369..4066838 Organism: Shigella dysenteriae strain 53-3937 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P63_RS21930 () | 4000393..4003716 | + | 3324 | WP_001236783.1 | miniconductance mechanosensitive channel MscM | - |
| C1P63_RS21935 () | 4003867..4005348 | - | 1482 | WP_011378953.1 | glutamate/gamma-aminobutyrate family transporter YjeM | - |
| C1P63_RS21940 () | 4005369..4006062 | - | 694 | Protein_4084 | IS1 family transposase | - |
| C1P63_RS21945 () | 4006121..4006288 | - | 168 | Protein_4085 | winged helix-turn-helix domain-containing protein | - |
| C1P63_RS21950 () | 4006306..4007003 | - | 698 | Protein_4086 | IS1 family transposase | - |
| C1P63_RS21965 () | 4007936..4008511 | - | 576 | Protein_4087 | transcriptional regulator | - |
| C1P63_RS21970 () | 4008548..4010245 | - | 1698 | WP_000068970.1 | protein-disulfide reductase DsbD | - |
| C1P63_RS21975 () | 4010221..4010559 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| C1P63_RS21980 () | 4010675..4011976 | - | 1302 | WP_000961953.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
| C1P63_RS21985 () | 4012094..4013530 | - | 1437 | WP_000069437.1 | aspartate ammonia-lyase | - |
| C1P63_RS21990 () | 4013866..4014342 | + | 477 | WP_001267440.1 | membrane protein FxsA | - |
| C1P63_RS22000 () | 4015141..4016388 | - | 1248 | WP_000015854.1 | L-methionine/branched-chain amino acid transporter | - |
| C1P63_RS22005 () | 4016664..4016957 | + | 294 | WP_001026276.1 | co-chaperone GroES | - |
| C1P63_RS22010 () | 4017001..4018647 | + | 1647 | WP_000729117.1 | 60 kDa chaperonin | VF |
| C1P63_RS22015 () | 4018785..4019138 | + | 354 | WP_000558209.1 | DUF4156 domain-containing protein | - |
| C1P63_RS22020 () | 4019188..4019505 | - | 318 | Protein_4098 | hypothetical protein | - |
| C1P63_RS22030 () | 4019562..4020256 | + | 695 | WP_134801565.1 | IS1 family transposase IS1N | Transposase |
| C1P63_RS22035 () | 4020273..4020629 | + | 357 | Protein_4100 | hypothetical protein | - |
| C1P63_RS22040 () | 4020692..4021246 | - | 555 | WP_000175272.1 | YtfJ family protein | - |
| C1P63_RS22045 () | 4021571..4021777 | + | 207 | WP_000689228.1 | DUF1107 domain-containing protein | - |
| C1P63_RS22050 () | 4021855..4023198 | - | 1344 | WP_000935042.1 | hypothetical protein | VF |
| C1P63_RS22055 () | 4023521..4024159 | - | 639 | WP_005021358.1 | Peptide methionine sulfoxide reductase MsrA | VF |
| C1P63_RS22060 () | 4024365..4026098 | + | 1734 | WP_001269318.1 | autotransporter assembly complex protein TamA | - |
| C1P63_RS22065 () | 4026095..4029874 | + | 3780 | WP_000060952.1 | autotransporter assembly complex protein TamB | - |
| C1P63_RS22070 () | 4029877..4030218 | + | 342 | WP_001219160.1 | gamma-glutamylcyclotransferase | - |
| C1P63_RS22075 () | 4030430..4030681 | + | 252 | WP_001223211.1 | type II toxin-antitoxin system antitoxin ChpS | Antitoxin Detail |
| C1P63_RS22080 () | 4030675..4031025 | + | 351 | WP_000239577.1 | endoribonuclease toxin ChpB | Toxin Detail |
| C1P63_RS22085 () | 4031102..4031632 | - | 531 | WP_000055075.1 | inorganic diphosphatase | - |
| C1P63_RS22090 () | 4031942..4032442 | + | 501 | Protein_4111 | galactofuranose ABC transporter substrate-binding protein YtfQ | - |
| C1P63_RS22100 () | 4033209..4034294 | + | 1086 | Protein_4113 | cadaverine/lysine antiporter | - |
| C1P63_RS22105 () | 4034374..4036516 | + | 2143 | Protein_4114 | lysine decarboxylase CadA | - |
| C1P63_RS22110 () | 4036575..4038032 | + | 1458 | WP_000856800.1 | dipeptide/tripeptide permease DtpC | - |
| C1P63_RS22115 () | 4038269..4038445 | + | 177 | Protein_4116 | lysine--tRNA ligase | - |
| C1P63_RS22120 () | 4038485..4039641 | - | 1157 | Protein_4117 | IS3 family transposase ISSd1 | Transposase |
| C1P63_RS22125 () | 4039708..4040493 | + | 786 | Protein_4118 | IS3 family transposase ISLad1 | Transposase |
| C1P63_RS25740 () | 4040860..4041069 | + | 210 | WP_078164603.1 | tellurite resistance TerB family protein | - |
| C1P63_RS22140 () | 4041475..4041937 | + | 463 | Protein_4120 | IS200-IS605 family transposase IS200C | Transposase |
| C1P63_RS22145 () | 4042411..4043105 | + | 695 | WP_134801557.1 | IS1 family transposase IS1N | Transposase |
| C1P63_RS22150 () | 4043129..4043791 | + | 663 | Protein_4122 | IS256 family transposase ISEc39 | Transposase |
| C1P63_RS22155 () | 4043827..4043955 | + | 129 | Protein_4123 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C1P63_RS22160 () | 4044001..4044144 | + | 144 | WP_001057987.1 | IS3 family transposase IS629 | Transposase |
| C1P63_RS22175 () | 4044607..4045300 | + | 694 | Protein_4125 | IS1 family transposase | - |
| C1P63_RS22180 () | 4045425..4046122 | + | 698 | Protein_4126 | IS1 family transposase | - |
| C1P63_RS22190 () | 4046627..4046731 | - | 105 | Protein_4127 | IS3 family transposase | - |
| C1P63_RS22195 () | 4046931..4048159 | + | 1229 | WP_171764072.1 | IS3 family transposase IS2 | Transposase |
| C1P63_RS22200 () | 4048301..4048366 | + | 66 | Protein_4129 | omptin family outer membrane protease | - |
| C1P63_RS22205 () | 4048386..4049083 | - | 698 | Protein_4130 | IS1 family transposase | - |
| C1P63_RS22210 () | 4049457..4050070 | + | 614 | Protein_4131 | acid-sensing system DNA-binding response regulator EvgA | - |
| C1P63_RS22215 () | 4050075..4053668 | + | 3594 | WP_134806299.1 | acid-sensing system histidine kinase EvgS | - |
| C1P63_RS22220 () | 4053828..4055366 | - | 1539 | WP_000998102.1 | IS66 family transposase ISEc8 | Transposase |
| C1P63_RS22225 () | 4055416..4055763 | - | 348 | WP_000612546.1 | IS66 family transposase ISEc8 | Transposase |
| C1P63_RS22230 () | 4055760..4056104 | - | 345 | WP_158249626.1 | transposase | - |
| C1P63_RS22235 () | 4056139..4056813 | + | 675 | WP_005021247.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P63_RS22240 () | 4056810..4057169 | + | 360 | Protein_4137 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P63_RS22245 () | 4057166..4057567 | + | 402 | Protein_4138 | IS66 family transposase ISSfl3 | Transposase |
| C1P63_RS22255 () | 4057708..4058405 | + | 698 | Protein_4139 | IS1 family transposase | - |
| C1P63_RS22260 () | 4058423..4059313 | + | 891 | Protein_4140 | IS3 family transposase ISSd1 | Transposase |
| C1P63_RS22265 () | 4059358..4060005 | - | 648 | Protein_4141 | DNA helicase | - |
| C1P63_RS22270 () | 4060065..4060759 | + | 695 | WP_134801567.1 | IS1 family transposase IS1N | Transposase |
| C1P63_RS22275 () | 4060871..4061914 | - | 1044 | WP_000999849.1 | hypothetical protein | - |
| C1P63_RS22285 () | 4063099..4063257 | - | 159 | WP_119164646.1 | integrase | - |
| C1P63_RS22290 () | 4063208..4064427 | - | 1220 | Protein_4146 | IS3 family transposase ISSd1 | Transposase |
| C1P63_RS22295 () | 4064495..4064869 | + | 375 | Protein_4147 | DUF4942 domain-containing protein | - |
| C1P63_RS22310 () | 4066145..4066838 | + | 694 | Protein_4149 | IS1 family transposase | - |
| C1P63_RS22315 () | 4066959..4068139 | + | 1181 | Protein_4150 | sugar efflux transporter | - |
| C1P63_RS22325 () | 4068250..4069173 | + | 924 | WP_000535937.1 | carboxylate/amino acid/amine transporter | - |
| C1P63_RS22330 () | 4069177..4069995 | - | 819 | WP_000779403.1 | lipoprotein NlpA | - |
| C1P63_RS22335 () | 4070078..4070775 | - | 698 | Protein_4153 | IS1 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|