MGE detailed information
MGE type: IScluster/Tn MGE length: 13693 bp
Accession: NZ_CP026780 Location: 2044158..2057850 Organism: Shigella dysenteriae strain 53-3937 Replicon: chromosome
Accession: NZ_CP026780 Location: 2044158..2057850 Organism: Shigella dysenteriae strain 53-3937 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P63_RS11410 () | 2040074..2041087 | + | 1014 | WP_005016000.1 | NAD(P)-dependent oxidoreductase | - |
| C1P63_RS11415 () | 2041084..2041914 | - | 831 | WP_001255151.1 | N-acetylmuramoyl-L-alanine amidase AmiD | - |
| C1P63_RS11420 () | 2041911..2042234 | - | 324 | WP_001160737.1 | heavy metal-binding domain-containing protein | - |
| C1P63_RS11430 () | 2042445..2042852 | - | 408 | Protein_2126 | pentapeptide repeat-containing protein | - |
| C1P63_RS11435 () | 2042908..2043605 | + | 698 | Protein_2127 | IS1 family transposase | - |
| C1P63_RS11440 () | 2043621..2044142 | - | 522 | Protein_2128 | pentapeptide repeat-containing protein | - |
| C1P63_RS11445 () | 2044158..2044851 | - | 694 | Protein_2129 | IS1-like element IS1N family transposase | - |
| C1P63_RS11455 () | 2045175..2045936 | + | 762 | Protein_2130 | pentapeptide repeat-containing protein | - |
| C1P63_RS11460 () | 2045994..2046688 | + | 695 | WP_134801557.1 | IS1 family transposase IS1N | Transposase |
| C1P63_RS11470 () | 2047092..2047609 | + | 518 | Protein_2132 | lipoprotein | - |
| C1P63_RS11475 () | 2047827..2048555 | + | 729 | WP_000027205.1 | Arginine transport ATP-binding protein ArtP | VF |
| C1P63_RS11480 () | 2048573..2049304 | + | 732 | WP_000756570.1 | arginine ABC transporter substrate-binding protein | - |
| C1P63_RS11485 () | 2049311..2050027 | + | 717 | WP_001001693.1 | arginine ABC transporter permease ArtQ | - |
| C1P63_RS11490 () | 2050027..2050695 | + | 669 | WP_000464490.1 | arginine ABC transporter permease ArtM | - |
| C1P63_RS11495 () | 2050986..2051306 | + | 321 | Protein_2137 | ABC transporter arginine-binding protein 1 | VF |
| C1P63_RS11500 () | 2051322..2052015 | - | 694 | Protein_2138 | IS1 family transposase | - |
| C1P63_RS11510 () | 2052072..2052212 | - | 141 | Protein_2139 | HNH endonuclease | - |
| C1P63_RS11515 () | 2052250..2052972 | - | 723 | WP_001004003.1 | DNA-binding protein | - |
| C1P63_RS11520 () | 2053047..2053724 | - | 678 | WP_000957540.1 | phage antirepressor Ant | - |
| C1P63_RS11525 () | 2054045..2054374 | + | 330 | WP_024258354.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C1P63_RS11530 () | 2054364..2054672 | + | 309 | WP_000147081.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| C1P63_RS11535 () | 2054669..2054890 | - | 222 | WP_001254231.1 | NinE family protein | - |
| C1P63_RS11540 () | 2054887..2055297 | - | 411 | WP_000814621.1 | recombination protein NinB | - |
| C1P63_RS11545 () | 2055350..2056045 | - | 696 | Protein_2146 | IS3 family transposase ISSd1 | Transposase |
| C1P63_RS11550 () | 2056106..2056650 | + | 545 | Protein_2147 | IS3 family transposase ISSfl10 | Transposase |
| C1P63_RS11560 () | 2057983..2058987 | + | 1005 | Protein_2149 | tyrosine-type recombinase/integrase | - |
| C1P63_RS11565 () | 2059045..2059605 | - | 561 | WP_001215754.1 | DUF1175 domain-containing protein | - |
| C1P63_RS11570 () | 2059602..2059943 | - | 342 | Protein_2151 | DUF2138 family protein | - |
| C1P63_RS11575 () | 2060179..2062806 | - | 2628 | WP_001281279.1 | DNA topoisomerase (ATP-hydrolyzing) subunit A | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|