MGE detailed information
MGE type: Prophage MGE length: 52593 bp
Accession: NZ_CP026780 Location: 2041084..2093676 Organism: Shigella dysenteriae strain 53-3937 Replicon: chromosome
Accession: NZ_CP026780 Location: 2041084..2093676 Organism: Shigella dysenteriae strain 53-3937 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P63_RS11400 () | 2037533..2038534 | + | 1002 | WP_000566392.1 | low-specificity L-threonine aldolase | - |
| C1P63_RS11405 () | 2038545..2039975 | + | 1431 | WP_001136565.1 | SDR family oxidoreductase | - |
| C1P63_RS11410 () | 2040074..2041087 | + | 1014 | WP_005016000.1 | NAD(P)-dependent oxidoreductase | - |
| C1P63_RS11415 () | 2041084..2041914 | - | 831 | WP_001255151.1 | N-acetylmuramoyl-L-alanine amidase AmiD | - |
| C1P63_RS11420 () | 2041911..2042234 | - | 324 | WP_001160737.1 | heavy metal-binding domain-containing protein | - |
| C1P63_RS11430 () | 2042445..2042852 | - | 408 | Protein_2126 | pentapeptide repeat-containing protein | - |
| C1P63_RS11435 () | 2042908..2043605 | + | 698 | Protein_2127 | IS1 family transposase | - |
| C1P63_RS11440 () | 2043621..2044142 | - | 522 | Protein_2128 | pentapeptide repeat-containing protein | - |
| C1P63_RS11445 () | 2044158..2044851 | - | 694 | Protein_2129 | IS1-like element IS1N family transposase | - |
| C1P63_RS11455 () | 2045175..2045936 | + | 762 | Protein_2130 | pentapeptide repeat-containing protein | - |
| C1P63_RS11460 () | 2045994..2046688 | + | 695 | WP_134801557.1 | IS1 family transposase IS1N | Transposase |
| C1P63_RS11470 () | 2047092..2047609 | + | 518 | Protein_2132 | lipoprotein | - |
| C1P63_RS11475 () | 2047827..2048555 | + | 729 | WP_000027205.1 | Arginine transport ATP-binding protein ArtP | VF |
| C1P63_RS11480 () | 2048573..2049304 | + | 732 | WP_000756570.1 | arginine ABC transporter substrate-binding protein | - |
| C1P63_RS11485 () | 2049311..2050027 | + | 717 | WP_001001693.1 | arginine ABC transporter permease ArtQ | - |
| C1P63_RS11490 () | 2050027..2050695 | + | 669 | WP_000464490.1 | arginine ABC transporter permease ArtM | - |
| C1P63_RS11495 () | 2050986..2051306 | + | 321 | Protein_2137 | ABC transporter arginine-binding protein 1 | VF |
| C1P63_RS11500 () | 2051322..2052015 | - | 694 | Protein_2138 | IS1 family transposase | - |
| C1P63_RS11510 () | 2052072..2052212 | - | 141 | Protein_2139 | HNH endonuclease | - |
| C1P63_RS11515 () | 2052250..2052972 | - | 723 | WP_001004003.1 | DNA-binding protein | - |
| C1P63_RS11520 () | 2053047..2053724 | - | 678 | WP_000957540.1 | phage antirepressor Ant | - |
| C1P63_RS11525 () | 2054045..2054374 | + | 330 | WP_024258354.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C1P63_RS11530 () | 2054364..2054672 | + | 309 | WP_000147081.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| C1P63_RS11535 () | 2054669..2054890 | - | 222 | WP_001254231.1 | NinE family protein | - |
| C1P63_RS11540 () | 2054887..2055297 | - | 411 | WP_000814621.1 | recombination protein NinB | - |
| C1P63_RS11545 () | 2055350..2056045 | - | 696 | Protein_2146 | IS3 family transposase ISSd1 | Transposase |
| C1P63_RS11550 () | 2056106..2056650 | + | 545 | Protein_2147 | IS3 family transposase ISSfl10 | Transposase |
| C1P63_RS11560 () | 2057983..2058987 | + | 1005 | Protein_2149 | hypothetical protein ; Integrase | Integrase |
| C1P63_RS11565 () | 2059045..2059605 | - | 561 | WP_001215754.1 | DUF1175 domain-containing protein | - |
| C1P63_RS11570 () | 2059602..2059943 | - | 342 | Protein_2151 | DUF2138 family protein | - |
| C1P63_RS11575 () | 2060179..2062806 | - | 2628 | WP_001281279.1 | DNA topoisomerase (ATP-hydrolyzing) subunit A | - |
| C1P63_RS11580 () | 2062953..2063675 | + | 723 | WP_000990765.1 | bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase | - |
| C1P63_RS11585 () | 2063816..2067568 | - | 3753 | Protein_2154 | AIDA-I family autotransporter adhesin YfaL/EhaC | - |
| C1P63_RS11590 () | 2068264..2070549 | + | 2286 | WP_001075157.1 | ribonucleoside-diphosphate reductase subunit alpha | - |
| C1P63_RS11595 () | 2070695..2071825 | + | 1131 | WP_000332037.1 | ribonucleotide-diphosphate reductase subunit beta | - |
| C1P63_RS11600 () | 2071825..2072079 | + | 255 | WP_000124825.1 | ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE | - |
| C1P63_RS11605 () | 2072133..2072783 | - | 651 | Protein_2158 | lipopolysaccharide kinase InaA | - |
| C1P63_RS11610 () | 2072864..2074054 | - | 1191 | WP_000660231.1 | MFS transporter | - |
| C1P63_RS11615 () | 2074219..2075090 | + | 872 | Protein_2160 | LysR family transcriptional regulator | - |
| C1P63_RS11620 () | 2075135..2076214 | - | 1080 | WP_000779098.1 | glycerophosphodiester phosphodiesterase | - |
| C1P63_RS11625 () | 2076219..2077577 | - | 1359 | WP_000948705.1 | glycerol-3-phosphate transporter | - |
| C1P63_RS11630 () | 2077850..2079478 | + | 1629 | WP_000857263.1 | anaerobic glycerol-3-phosphate dehydrogenase subunit A | - |
| C1P63_RS11635 () | 2079468..2080727 | + | 1260 | WP_001209957.1 | glycerol-3-phosphate dehydrogenase subunit GlpB | - |
| C1P63_RS11640 () | 2080724..2081914 | + | 1191 | WP_001000380.1 | anaerobic glycerol-3-phosphate dehydrogenase subunit C | - |
| C1P63_RS11645 () | 2082107..2083033 | + | 927 | WP_000140558.1 | Recombination-promoting nuclease RpnA | VF |
| C1P63_RS11650 () | 2083074..2083877 | - | 804 | WP_000992971.1 | 2-keto-3-deoxy-L-rhamnonate aldolase | - |
| C1P63_RS11655 () | 2083895..2084971 | - | 1077 | Protein_2168 | MFS transporter | - |
| C1P63_RS11660 () | 2085029..2085726 | + | 698 | WP_134801667.1 | IS1 family transposase | - |
| C1P63_RS11665 () | 2085736..2086758 | + | 1023 | WP_094110609.1 | L-rhamnonate dehydratase | - |
| C1P63_RS11670 () | 2086815..2087033 | + | 219 | Protein_2171 | MFS transporter | - |
| C1P63_RS11675 () | 2087049..2087746 | - | 698 | Protein_2172 | IS1 family transposase | - |
| C1P63_RS11680 () | 2087802..2087999 | - | 198 | Protein_2173 | L-rhamnonate dehydratase | - |
| C1P63_RS11685 () | 2088014..2088472 | - | 459 | Protein_2174 | putative HTH-type transcriptional regulator RhmR | VF |
| C1P63_RS25500 () | 2088411..2088551 | - | 141 | WP_171547755.1 | hypothetical protein | - |
| C1P63_RS11695 () | 2088531..2089225 | + | 695 | WP_134802080.1 | IS1 family transposase IS1N | Transposase |
| C1P63_RS11700 () | 2089240..2089836 | + | 597 | Protein_2177 | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | VF |
| C1P63_RS11705 () | 2089840..2090807 | + | 968 | Protein_2178 | undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase | - |
| C1P63_RS11710 () | 2090807..2092789 | + | 1983 | Protein_2179 | Bifunctional polymyxin resistance protein ArnA | VF |
| C1P63_RS11715 () | 2092786..2093676 | + | 891 | WP_000169752.1 | 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase | - |
| C1P63_RS11720 () | 2093676..2095328 | + | 1653 | WP_134806229.1 | lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase | - |
| C1P63_RS11725 () | 2095325..2095660 | + | 336 | WP_000638028.1 | 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE | - |
| C1P63_RS11730 () | 2095660..2096046 | + | 387 | WP_000523884.1 | 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF | - |
| C1P63_RS11735 () | 2096040..2096304 | - | 265 | Protein_2184 | signal transduction protein PmrD | - |
| C1P63_RS11740 () | 2096414..2097769 | - | 1356 | WP_000577578.1 | o-succinylbenzoate--CoA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|