MGE detailed information
MGE type: IScluster/Tn MGE length: 23975 bp
Accession: NZ_CP026779 Location: 388..24362 Organism: Shigella dysenteriae strain 69-3818 Replicon: plasmid unnamed2
Accession: NZ_CP026779 Location: 388..24362 Organism: Shigella dysenteriae strain 69-3818 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5C01_RS24895 () | 1124..2333 | - | 1210 | Protein_1 | IS3 family transposase IS629 | Transposase |
| C5C01_RS24905 () | 2530..2853 | + | 324 | Protein_2 | IS21 family transposase IS100 | Transposase |
| C5C01_RS24910 () | 2930..3627 | - | 698 | Protein_3 | IS1 family transposase | - |
| C5C01_RS24915 () | 3656..4447 | - | 792 | WP_134806176.1 | AraC family invasion system transcriptional regulator VirF | - |
| C5C01_RS24920 () | 4876..5277 | + | 402 | Protein_5 | DDE-type integrase/transposase/recombinase | - |
| C5C01_RS24925 () | 5459..5725 | + | 267 | WP_000957713.1 | hypothetical protein | VF |
| C5C01_RS24930 () | 5875..6572 | + | 698 | Protein_7 | IS1 family transposase | - |
| C5C01_RS24935 () | 6589..7146 | + | 558 | Protein_8 | putative E3 ubiquitin-protein ligase ipaH4.5 | VF |
| C5C01_RS24940 () | 7211..8367 | + | 1157 | WP_134802642.1 | IS3 family transposase ISSd1 | Transposase |
| C5C01_RS24945 () | 8591..9799 | - | 1209 | WP_119178644.1 | IS91 family transposase ISSbo1 | Transposase |
| C5C01_RS24950 () | 9780..10052 | - | 273 | WP_000019161.1 | hypothetical protein | - |
| C5C01_RS27995 () | 10127..10924 | + | 798 | Protein_12 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| C5C01_RS28000 () | 10907..11590 | + | 684 | Protein_13 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| C5C01_RS24960 () | 11633..12156 | - | 524 | Protein_14 | IS3 family transposase ISSfl11 | Transposase |
| C5C01_RS24965 () | 12224..12706 | - | 483 | WP_000405248.1 | GNAT family N-acetyltransferase | Toxin Detail |
| C5C01_RS24970 () | 12697..12999 | - | 303 | WP_162147618.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| C5C01_RS24975 () | 13413..14147 | - | 735 | Protein_17 | IS21 family transposase IS100kyp | Transposase |
| C5C01_RS24980 () | 14280..15422 | - | 1143 | Protein_18 | IS91 family transposase ISSbo1 | Transposase |
| C5C01_RS24985 () | 15403..15675 | - | 273 | WP_000019161.1 | hypothetical protein | - |
| C5C01_RS24995 () | 15758..16282 | - | 525 | Protein_20 | IS66 family transposase ISSfl3 | Transposase |
| C5C01_RS25000 () | 16419..16592 | - | 174 | WP_011379008.1 | transposase | - |
| C5C01_RS25005 () | 16932..18386 | + | 1455 | WP_011379007.1 | hypothetical protein | VF |
| C5C01_RS25015 () | 18725..19881 | + | 1157 | WP_134801813.1 | IS3 family transposase IS600 | Transposase |
| C5C01_RS25020 () | 19925..20725 | + | 801 | Protein_24 | IS3 family transposase | - |
| C5C01_RS27775 () | 20840..21181 | + | 342 | Protein_25 | IS4 family transposase ISEc13 | Transposase |
| C5C01_RS28005 () | 21164..22001 | + | 838 | Protein_26 | IS4 family transposase ISEc13 | Transposase |
| C5C01_RS25030 () | 22049..23245 | - | 1197 | WP_011379003.1 | IS110 family transposase ISEc20 | Transposase |
| C5C01_RS25035 () | 23436..24429 | - | 994 | Protein_28 | IS21 family transposase IS100kyp | Transposase |
| C5C01_RS27790 () | 25043..25180 | + | 138 | WP_001102512.1 | hypothetical protein | - |
| C5C01_RS25045 () | 25779..26558 | + | 780 | WP_024263024.1 | type III secretion system effector cysteine protease IpaJ | - |
| C5C01_RS25050 () | 27507..28436 | - | 930 | WP_000227976.1 | virulence regulon transcriptional activator VirB | - |
| C5C01_RS25055 () | 28643..28879 | - | 237 | WP_000588956.1 | acyl carrier protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|