MGE detailed information
MGE type: IScluster/Tn MGE length: 12417 bp
Accession: NZ_CP026777 Location: 10739..23155 Organism: Shigella dysenteriae strain 69-3818 Replicon: chromosome
Accession: NZ_CP026777 Location: 10739..23155 Organism: Shigella dysenteriae strain 69-3818 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5C01_RS00030 () | 5880..6892 | + | 1013 | Protein_5 | NAD(P)-dependent oxidoreductase | - |
| C5C01_RS00035 () | 6889..7719 | - | 831 | WP_001255151.1 | N-acetylmuramoyl-L-alanine amidase AmiD | - |
| C5C01_RS00040 () | 7716..8038 | - | 323 | Protein_7 | heavy metal-binding domain-containing protein | - |
| C5C01_RS00050 () | 8249..8656 | - | 408 | Protein_8 | pentapeptide repeat-containing protein | - |
| C5C01_RS00055 () | 8712..9409 | + | 698 | Protein_9 | IS1 family transposase | - |
| C5C01_RS00060 () | 9425..9688 | - | 264 | Protein_10 | pentapeptide repeat-containing protein | - |
| C5C01_RS00065 () | 9704..10401 | - | 698 | Protein_11 | IS1 family transposase | - |
| C5C01_RS00070 () | 10457..10723 | - | 267 | Protein_12 | hypothetical protein | - |
| C5C01_RS00075 () | 10739..11432 | - | 694 | Protein_13 | IS1-like element IS1N family transposase | - |
| C5C01_RS00080 () | 11490..12245 | - | 756 | Protein_14 | pentapeptide repeat-containing protein | - |
| C5C01_RS00090 () | 12569..13262 | + | 694 | Protein_15 | IS1-like element IS1N family transposase | - |
| C5C01_RS00100 () | 13666..14182 | + | 517 | Protein_16 | lipoprotein | - |
| C5C01_RS00105 () | 14400..15128 | + | 729 | WP_000027205.1 | Arginine transport ATP-binding protein ArtP | VF |
| C5C01_RS00110 () | 15146..15877 | + | 732 | WP_000756570.1 | arginine ABC transporter substrate-binding protein | - |
| C5C01_RS00115 () | 15884..16600 | + | 717 | WP_001001693.1 | arginine ABC transporter permease ArtQ | - |
| C5C01_RS00120 () | 16600..17268 | + | 669 | WP_000464490.1 | arginine ABC transporter permease ArtM | - |
| C5C01_RS00125 () | 17559..17879 | + | 321 | Protein_21 | ABC transporter arginine-binding protein 1 | VF |
| C5C01_RS00140 () | 18646..18786 | - | 141 | Protein_23 | HNH endonuclease | - |
| C5C01_RS00145 () | 18824..19546 | - | 723 | WP_001004003.1 | DNA-binding protein | - |
| C5C01_RS00150 () | 19621..20298 | - | 678 | WP_000957540.1 | phage antirepressor Ant | - |
| C5C01_RS00155 () | 20619..20948 | + | 330 | WP_024258354.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C5C01_RS00160 () | 20938..21246 | + | 309 | WP_000147081.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| C5C01_RS00165 () | 21243..21464 | - | 222 | WP_001254231.1 | NinE family protein | - |
| C5C01_RS00170 () | 21461..21871 | - | 411 | WP_000814621.1 | recombination protein NinB | - |
| C5C01_RS00180 () | 23289..24293 | + | 1005 | Protein_31 | tyrosine-type recombinase/integrase | - |
| C5C01_RS00185 () | 24351..24911 | - | 561 | WP_001215754.1 | DUF1175 domain-containing protein | - |
| C5C01_RS00190 () | 24908..25249 | - | 342 | Protein_33 | DUF2138 family protein | - |
| C5C01_RS00195 () | 25485..28112 | - | 2628 | WP_001281279.1 | DNA topoisomerase (ATP-hydrolyzing) subunit A | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|