MGE detailed information
MGE type: Prophage MGE length: 48456 bp
Accession: NZ_CP026774 Location: 4025946..4074401 Organism: Shigella dysenteriae strain ATCC 13313 Replicon: chromosome
Accession: NZ_CP026774 Location: 4025946..4074401 Organism: Shigella dysenteriae strain ATCC 13313 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P61_RS22005 () | 4021093..4021428 | - | 336 | WP_000638028.1 | 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE | - |
| C1P61_RS22010 () | 4021425..4023077 | - | 1653 | WP_000844007.1 | lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase | - |
| C1P61_RS22015 () | 4023077..4023967 | - | 891 | WP_000169752.1 | 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase | - |
| C1P61_RS22020 () | 4023964..4025946 | - | 1983 | Protein_4119 | bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA | - |
| C1P61_RS22025 () | 4025946..4026913 | - | 968 | Protein_4120 | undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase | - |
| C1P61_RS22030 () | 4026917..4027513 | - | 597 | Protein_4121 | DegT/DnrJ/EryC1/StrS family aminotransferase | - |
| C1P61_RS22035 () | 4027528..4028221 | - | 694 | Protein_4122 | IS1 family transposase | - |
| C1P61_RS26565 () | 4028201..4028341 | + | 141 | WP_171547755.1 | hypothetical protein | - |
| C1P61_RS22045 () | 4028280..4028738 | + | 459 | Protein_4124 | IclR family transcriptional regulator C-terminal domain-containing protein | - |
| C1P61_RS22050 () | 4028753..4028950 | + | 198 | Protein_4125 | L-rhamnonate dehydratase | - |
| C1P61_RS22055 () | 4029006..4029703 | + | 698 | WP_134801667.1 | IS1 family transposase | - |
| C1P61_RS22060 () | 4029719..4029937 | - | 219 | Protein_4127 | MFS transporter | - |
| C1P61_RS22065 () | 4029994..4031016 | - | 1023 | WP_094110609.1 | L-rhamnonate dehydratase | - |
| C1P61_RS22075 () | 4031781..4032107 | + | 327 | Protein_4130 | MFS transporter | - |
| C1P61_RS22080 () | 4032206..4032856 | + | 651 | Protein_4131 | MFS transporter | - |
| C1P61_RS22085 () | 4032874..4033677 | + | 804 | WP_000992971.1 | 2-keto-3-deoxy-L-rhamnonate aldolase | - |
| C1P61_RS22090 () | 4033718..4034644 | - | 927 | WP_000140558.1 | ISNCY family transposase | - |
| C1P61_RS22095 () | 4034837..4036027 | - | 1191 | WP_001000380.1 | anaerobic glycerol-3-phosphate dehydrogenase subunit C | - |
| C1P61_RS22100 () | 4036024..4037283 | - | 1260 | WP_001209957.1 | glycerol-3-phosphate dehydrogenase subunit GlpB | - |
| C1P61_RS22105 () | 4037273..4038901 | - | 1629 | WP_000857263.1 | anaerobic glycerol-3-phosphate dehydrogenase subunit A | - |
| C1P61_RS22110 () | 4039174..4040532 | + | 1359 | WP_000948705.1 | glycerol-3-phosphate transporter | - |
| C1P61_RS22115 () | 4040537..4041616 | + | 1080 | WP_000779098.1 | glycerophosphodiester phosphodiesterase | - |
| C1P61_RS22120 () | 4041661..4042532 | - | 872 | Protein_4139 | LysR family transcriptional regulator | - |
| C1P61_RS22125 () | 4042697..4043887 | + | 1191 | WP_000660231.1 | MFS transporter | - |
| C1P61_RS22130 () | 4043968..4044618 | + | 651 | Protein_4141 | lipopolysaccharide kinase InaA | - |
| C1P61_RS22135 () | 4044672..4044926 | - | 255 | WP_000124825.1 | ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE | - |
| C1P61_RS22140 () | 4044926..4046056 | - | 1131 | WP_000332037.1 | ribonucleotide-diphosphate reductase subunit beta | - |
| C1P61_RS22145 () | 4046202..4048487 | - | 2286 | WP_001075157.1 | ribonucleoside-diphosphate reductase subunit alpha | - |
| C1P61_RS22150 () | 4049183..4052935 | + | 3753 | Protein_4145 | AIDA-I family autotransporter adhesin YfaL/EhaC | - |
| C1P61_RS22155 () | 4053076..4053798 | - | 723 | WP_000990765.1 | bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase | - |
| C1P61_RS22160 () | 4053945..4056572 | + | 2628 | WP_001281279.1 | DNA topoisomerase (ATP-hydrolyzing) subunit A | - |
| C1P61_RS22165 () | 4056808..4057149 | + | 342 | Protein_4148 | DUF2138 family protein | - |
| C1P61_RS22170 () | 4057146..4057706 | + | 561 | WP_134801719.1 | DUF1175 domain-containing protein | - |
| C1P61_RS22175 () | 4057764..4058768 | - | 1005 | Protein_4150 | tyrosine-type recombinase/integrase | - |
| C1P61_RS22180 () | 4058902..4060133 | + | 1232 | WP_134801668.1 | IS3-like element IS600 family transposase | - |
| C1P61_RS22185 () | 4060186..4060596 | + | 411 | WP_000814621.1 | recombination protein NinB | - |
| C1P61_RS22190 () | 4060593..4060814 | + | 222 | WP_001254231.1 | NinE family protein | - |
| C1P61_RS22195 () | 4060811..4061119 | - | 309 | WP_000147081.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| C1P61_RS22200 () | 4061109..4061438 | - | 330 | WP_024258354.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C1P61_RS22205 () | 4061759..4062436 | + | 678 | WP_000957540.1 | phage antirepressor Ant | - |
| C1P61_RS22210 () | 4062511..4063233 | + | 723 | WP_001004003.1 | DNA-binding protein | - |
| C1P61_RS22215 () | 4063271..4063411 | + | 141 | Protein_4158 | HNH endonuclease | - |
| C1P61_RS22225 () | 4063468..4064162 | + | 695 | WP_134801589.1 | IS1 family transposase | - |
| C1P61_RS22230 () | 4064178..4064498 | - | 321 | Protein_4160 | ABC transporter substrate-binding protein ArtJ | - |
| C1P61_RS22235 () | 4064789..4065457 | - | 669 | WP_000464490.1 | arginine ABC transporter permease ArtM | - |
| C1P61_RS22240 () | 4065457..4066173 | - | 717 | WP_001001693.1 | arginine ABC transporter permease ArtQ | - |
| C1P61_RS22245 () | 4066180..4066911 | - | 732 | WP_134801669.1 | arginine ABC transporter substrate-binding protein | - |
| C1P61_RS22250 () | 4066929..4067657 | - | 729 | WP_000027205.1 | arginine ABC transporter ATP-binding protein ArtP | - |
| C1P61_RS22255 () | 4067875..4068392 | - | 518 | Protein_4165 | lipoprotein | - |
| C1P61_RS22275 () | 4069814..4070575 | + | 762 | Protein_4167 | pentapeptide repeat-containing protein | - |
| C1P61_RS22280 () | 4070633..4071327 | + | 695 | WP_134801557.1 | IS1-like element IS1N family transposase | - |
| C1P61_RS22285 () | 4071343..4071864 | + | 522 | Protein_4169 | pentapeptide repeat-containing protein | - |
| C1P61_RS22290 () | 4071880..4072577 | - | 698 | Protein_4170 | IS1 family transposase | - |
| C1P61_RS22295 () | 4072633..4073040 | + | 408 | Protein_4171 | pentapeptide repeat-containing protein | - |
| C1P61_RS22305 () | 4073251..4073574 | + | 324 | WP_001160737.1 | heavy metal-binding domain-containing protein | - |
| C1P61_RS22310 () | 4073571..4074401 | + | 831 | WP_001255151.1 | N-acetylmuramoyl-L-alanine amidase AmiD | - |
| C1P61_RS22315 () | 4074398..4075411 | - | 1014 | WP_005016000.1 | NAD(P)-dependent oxidoreductase | - |
| C1P61_RS22320 () | 4075510..4076940 | - | 1431 | WP_001136565.1 | SDR family oxidoreductase | - |
| C1P61_RS22325 () | 4076951..4077952 | - | 1002 | WP_000566392.1 | low-specificity L-threonine aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|