MGE detailed information
MGE type: IScluster/Tn MGE length: 45799 bp
Accession: NZ_CP026767 Location: 90772..136570 Organism: Shigella boydii strain 59-248 Replicon: plasmid unnamed
Accession: NZ_CP026767 Location: 90772..136570 Organism: Shigella boydii strain 59-248 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P58_RS25040 () | 85844..86056 | + | 213 | WP_011379083.1 | ANR family transcriptional regulator | - |
| C1P58_RS25050 () | 86300..86761 | + | 462 | WP_001233866.1 | thermonuclease family protein | - |
| C1P58_RS25055 () | 86807..87016 | + | 210 | WP_001299729.1 | hemolysin expression modulator Hha | - |
| C1P58_RS25060 () | 87055..87645 | + | 591 | WP_073690936.1 | DUF2726 domain-containing protein | - |
| C1P58_RS25065 () | 87885..88145 | + | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| C1P58_RS25075 () | 88369..88443 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| C1P58_RS25080 () | 88436..89293 | + | 858 | WP_000130973.1 | incFII family plasmid replication initiator RepA | - |
| C1P58_RS25095 () | 90277..90600 | - | 324 | Protein_101 | IS110 family transposase | - |
| C1P58_RS25100 () | 90772..91854 | - | 1083 | Protein_102 | transposase | - |
| C1P58_RS26335 () | 91864..92022 | - | 159 | WP_073691821.1 | hypothetical protein | - |
| C1P58_RS25105 () | 92037..92881 | - | 845 | Protein_104 | IS5 family transposase | - |
| C1P58_RS25110 () | 93306..94760 | + | 1455 | WP_000701110.1 | type 3 secretion system effector OspC2 | - |
| C1P58_RS25965 () | 94909..95037 | - | 129 | Protein_106 | IS5/IS1182 family transposase | - |
| C1P58_RS25125 () | 95209..96417 | - | 1209 | WP_134802528.1 | IS91 family transposase | - |
| C1P58_RS25130 () | 96398..96670 | - | 273 | WP_000019158.1 | hypothetical protein | - |
| C1P58_RS25140 () | 96942..97244 | + | 303 | WP_010921625.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| C1P58_RS25145 () | 97235..97717 | + | 483 | WP_000405246.1 | GNAT family N-acetyltransferase | Toxin Detail |
| C1P58_RS25150 () | 97803..98500 | - | 698 | Protein_111 | IS1 family transposase | - |
| C1P58_RS25155 () | 98561..99084 | + | 524 | Protein_112 | transposase | - |
| C1P58_RS25160 () | 99127..99465 | - | 339 | Protein_113 | transposase | - |
| C1P58_RS25165 () | 99539..100707 | + | 1169 | WP_094096743.1 | IS3 family transposase | - |
| C1P58_RS25170 () | 100731..101423 | - | 693 | WP_073832157.1 | type III secretion system effector cysteine methyltransferase OspZ | - |
| C1P58_RS25175 () | 101479..101631 | + | 153 | Protein_116 | IS3 family transposase | - |
| C1P58_RS25185 () | 103012..103959 | + | 948 | WP_073691640.1 | omptin family outer membrane protease IcsP | - |
| C1P58_RS25195 () | 104519..104704 | - | 186 | Protein_118 | transposase | - |
| C1P58_RS25200 () | 104734..106326 | - | 1593 | WP_134802460.1 | IS66 family transposase | - |
| C1P58_RS25205 () | 106357..106707 | - | 351 | WP_134802245.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P58_RS25210 () | 106704..107093 | - | 390 | Protein_121 | transposase | - |
| C1P58_RS25215 () | 107198..107405 | - | 208 | Protein_122 | IS3 family transposase | - |
| C1P58_RS25225 () | 107646..108401 | - | 756 | Protein_123 | IS3-like element IS2 family transposase | - |
| C1P58_RS25235 () | 109648..110186 | - | 539 | Protein_125 | transposase | - |
| C1P58_RS25240 () | 110251..110370 | + | 120 | Protein_126 | DUF3440 domain-containing protein | - |
| C1P58_RS25245 () | 110620..111486 | + | 867 | WP_001046942.1 | type 3 secretion system effector OspB | - |
| C1P58_RS25250 () | 111817..112557 | + | 741 | WP_000850661.1 | PAP2 family phosphatase PhoN2 | - |
| C1P58_RS25265 () | 112910..113089 | - | 180 | Protein_129 | T3SS effector OspC family protein | - |
| C1P58_RS25270 () | 113095..113792 | - | 698 | Protein_130 | IS1 family transposase | - |
| C1P58_RS25275 () | 113849..114743 | - | 895 | Protein_131 | T3SS effector OspC family protein | - |
| C1P58_RS25285 () | 116470..116991 | - | 522 | Protein_133 | transposase | - |
| C1P58_RS25290 () | 117005..117690 | - | 686 | Protein_134 | IS3 family transposase | - |
| C1P58_RS25300 () | 118380..120089 | - | 1710 | WP_004976019.1 | ShET2/EspL2 family type III secretion system effector toxin | - |
| C1P58_RS25305 () | 120521..121240 | - | 720 | WP_001121865.1 | type III secretion system effector phosphothreonine lyase | - |
| C1P58_RS25310 () | 121365..121928 | - | 564 | Protein_137 | transposase | - |
| C1P58_RS25315 () | 121912..122170 | + | 259 | Protein_138 | IS1 family transposase | - |
| C1P58_RS25320 () | 122279..122857 | - | 579 | WP_000868561.1 | hypothetical protein | - |
| C1P58_RS25325 () | 123278..123515 | - | 238 | Protein_140 | ATP-binding protein | - |
| C1P58_RS25330 () | 123702..124131 | - | 430 | Protein_141 | transposase | - |
| C1P58_RS25335 () | 124179..124364 | - | 186 | WP_005008511.1 | hypothetical protein | - |
| C1P58_RS26340 () | 124527..124808 | + | 282 | Protein_143 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P58_RS25345 () | 124822..126167 | - | 1346 | Protein_144 | IS4 family transposase | - |
| C1P58_RS25350 () | 126234..126611 | + | 378 | Protein_145 | transposase | - |
| C1P58_RS25355 () | 126611..126958 | + | 348 | WP_073691597.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P58_RS25360 () | 126978..128132 | + | 1155 | Protein_147 | IS66 family transposase | - |
| C1P58_RS25365 () | 128136..128295 | + | 160 | Protein_148 | IS3 family transposase | - |
| C1P58_RS25370 () | 128884..129182 | + | 299 | Protein_149 | transposase | - |
| C1P58_RS25375 () | 129264..129401 | + | 138 | Protein_150 | IS630 family transposase | - |
| C1P58_RS25380 () | 129773..130450 | + | 678 | WP_073691453.1 | type 3 secretion system effector/anti-activator OspD1 | - |
| C1P58_RS26345 () | 130962..131276 | + | 315 | WP_011114726.1 | hypothetical protein | - |
| C1P58_RS25400 () | 131558..132124 | + | 567 | WP_005057975.1 | type III secretion effector IpgB2 | - |
| C1P58_RS25405 () | 132269..132966 | + | 698 | Protein_154 | IS1 family transposase | - |
| C1P58_RS26415 () | 133163..133285 | - | 123 | Protein_155 | transposase domain-containing protein | - |
| C1P58_RS25415 () | 133428..133982 | + | 555 | Protein_156 | IS3-like element IS3H family transposase | - |
| C1P58_RS25420 () | 134322..134682 | + | 361 | Protein_157 | IS1 family transposase | - |
| C1P58_RS25430 () | 134769..135791 | + | 1023 | WP_005031026.1 | IS21 family transposase | - |
| C1P58_RS25435 () | 135788..136570 | + | 783 | WP_073691218.1 | IS21-like element IS100kyp family helper ATPase IstB | - |
| C1P58_RS25440 () | 136637..136975 | + | 339 | Protein_160 | IS1 family transposase | - |
| C1P58_RS25450 () | 137297..138496 | + | 1200 | WP_000200287.1 | AAA family ATPase | - |
| C1P58_RS25455 () | 138496..139476 | + | 981 | WP_000431558.1 | ParB/RepB/Spo0J family partition protein | - |
| C1P58_RS25460 () | 139732..140214 | + | 483 | Protein_163 | IS110 family transposase | - |
| C1P58_RS26350 () | 140268..140422 | - | 155 | Protein_164 | transposase domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|