MGE detailed information
MGE type: Prophage MGE length: 52418 bp
Accession: NZ_CP026766 Location: 4245770..4298187 Organism: Shigella boydii strain 59-248 Replicon: chromosome
Accession: NZ_CP026766 Location: 4245770..4298187 Organism: Shigella boydii strain 59-248 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P58_RS21820 () | 4241741..4242640 | - | 900 | WP_000131782.1 | ATP phosphoribosyltransferase | - |
| C1P58_RS21825 () | 4242786..4242836 | - | 51 | WP_001364200.1 | his operon leader peptide | - |
| C1P58_RS21830 () | 4243119..4243370 | + | 252 | WP_001259255.1 | YoeB-YefM toxin-antitoxin system antitoxin YefM | - |
| C1P58_RS21835 () | 4243367..4243621 | + | 255 | Protein_4141 | type II toxin-antitoxin system mRNA interferase toxin YoeB | - |
| C1P58_RS21840 () | 4243704..4244528 | + | 825 | WP_000754749.1 | SDR family oxidoreductase | - |
| C1P58_RS21845 () | 4244574..4245503 | + | 930 | WP_000803344.1 | LysR family transcriptional regulator | - |
| C1P58_RS21850 () | 4245718..4245780 | + | 63 | WP_010723108.1 | membrane protein YoeI | - |
| C1P58_RS21855 () | 4245770..4247128 | + | 1359 | WP_000019197.1 | putrescine/proton symporter PlaP | - |
| C1P58_RS21865 () | 4247307..4247918 | + | 612 | Protein_4146 | transport protein YeeE | - |
| C1P58_RS21870 () | 4248010..4249238 | + | 1229 | WP_171765906.1 | IS3 family transposase IS2 | Transposase |
| C1P58_RS21875 () | 4249249..4249701 | + | 453 | Protein_4148 | transport protein YeeE | - |
| C1P58_RS21880 () | 4249715..4249942 | + | 228 | WP_000985273.1 | sulfurtransferase TusA family protein | - |
| C1P58_RS21885 () | 4249985..4251409 | - | 1425 | WP_000132564.1 | exodeoxyribonuclease I | - |
| C1P58_RS21890 () | 4251742..4252910 | + | 1169 | WP_134802471.1 | IS3 family transposase ISLad1 | Transposase |
| C1P58_RS21895 () | 4252920..4253579 | + | 660 | Protein_4152 | FUSC family protein | - |
| C1P58_RS21900 () | 4253751..4254080 | + | 330 | WP_000450409.1 | DUF496 family protein | - |
| C1P58_RS21905 () | 4254181..4254624 | - | 444 | WP_001369832.1 | EutP/PduV family microcompartment system protein | - |
| C1P58_RS21910 () | 4254629..4254979 | - | 351 | WP_073691438.1 | propanediol utilization microcompartment protein PduU | - |
| C1P58_RS21915 () | 4254979..4255533 | - | 555 | WP_073691439.1 | propanediol utilization microcompartment protein PduT | - |
| C1P58_RS21920 () | 4255536..4256877 | - | 1342 | Protein_4157 | SLBB domain-containing protein | - |
| C1P58_RS21925 () | 4256874..4257830 | - | 957 | Protein_4158 | hypothetical protein | VF |
| C1P58_RS21930 () | 4257848..4258545 | - | 698 | Protein_4159 | IS1 family transposase IS1X2 | Transposase |
| C1P58_RS21935 () | 4258579..4258935 | - | 357 | WP_005113720.1 | hypothetical protein | - |
| C1P58_RS21940 () | 4259001..4259345 | - | 345 | WP_000133371.1 | DUF3168 domain-containing protein | - |
| C1P58_RS21945 () | 4259342..4259788 | - | 447 | WP_000569978.1 | HK97 gp10 family phage protein | - |
| C1P58_RS21950 () | 4259785..4260135 | - | 351 | WP_001007905.1 | phage head closure protein | - |
| C1P58_RS21955 () | 4260145..4260471 | - | 327 | WP_000125997.1 | head-tail connector protein | - |
| C1P58_RS21960 () | 4260468..4261067 | - | 600 | WP_064717136.1 | hypothetical protein | - |
| C1P58_RS21965 () | 4261058..4261684 | - | 627 | Protein_4166 | hypothetical protein | VF |
| C1P58_RS21970 () | 4261679..4262883 | + | 1205 | WP_171765907.1 | IS3 family transposase IS629 | Transposase |
| C1P58_RS21975 () | 4262924..4268713 | - | 5790 | Protein_4168 | Ig-like domain-containing protein | - |
| C1P58_RS21985 () | 4269203..4270000 | - | 798 | WP_073691678.1 | DgsA anti-repressor MtfA | - |
| C1P58_RS21995 () | 4270211..4270417 | - | 207 | Protein_4170 | integrase | - |
| C1P58_RS26400 () | 4270407..4270487 | - | 81 | Protein_4171 | tail fiber assembly protein | - |
| C1P58_RS26275 () | 4270490..4271011 | - | 522 | WP_192940938.1 | hypothetical protein | - |
| C1P58_RS26280 () | 4271032..4271697 | - | 666 | WP_004981765.1 | hypothetical protein | - |
| C1P58_RS22005 () | 4271684..4272274 | - | 591 | WP_073691607.1 | DUF2313 domain-containing protein | - |
| C1P58_RS22010 () | 4272274..4272432 | - | 159 | WP_000281422.1 | hypothetical protein | - |
| C1P58_RS22015 () | 4272514..4273670 | + | 1157 | WP_094096479.1 | IS3 family transposase IS600 | Transposase |
| C1P58_RS22025 () | 4273714..4274469 | - | 756 | Protein_4177 | DUF968 domain-containing protein | - |
| C1P58_RS22030 () | 4274471..4274749 | - | 279 | WP_000929754.1 | hypothetical protein | - |
| C1P58_RS22040 () | 4274917..4275072 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - () | 4275084..4275142 | + | 59 | - | - | Antitoxin Detail |
| C1P58_RS22055 () | 4275724..4276140 | - | 417 | WP_005069274.1 | hypothetical protein | - |
| C1P58_RS22060 () | 4276237..4276692 | - | 456 | WP_000335373.1 | ead/Ea22-like family protein | - |
| C1P58_RS22065 () | 4276679..4276984 | - | 306 | WP_001266147.1 | DUF4406 domain-containing protein | - |
| C1P58_RS22070 () | 4276981..4277403 | - | 423 | WP_134802472.1 | DUF977 family protein | - |
| C1P58_RS22075 () | 4277444..4278514 | - | 1071 | WP_001262382.1 | hypothetical protein | - |
| C1P58_RS22080 () | 4278586..4279011 | - | 426 | WP_000693847.1 | Rha family transcriptional regulator | - |
| C1P58_RS22085 () | 4279008..4279262 | - | 255 | WP_001072337.1 | hypothetical protein | - |
| C1P58_RS22090 () | 4279342..4279761 | + | 420 | WP_000233320.1 | helix-turn-helix domain-containing protein | - |
| C1P58_RS22095 () | 4280093..4280790 | - | 698 | Protein_4188 | IS1 family transposase IS1X2 | Transposase |
| C1P58_RS22105 () | 4280848..4283247 | + | 2400 | Protein_4189 | 3'-5' exoribonuclease | - |
| C1P58_RS22110 () | 4283306..4283509 | + | 204 | WP_000096343.1 | DUF4224 domain-containing protein | - |
| C1P58_RS22115 () | 4283509..4284350 | + | 842 | Protein_4191 | hypothetical protein ; Integrase | Integrase |
| C1P58_RS22120 () | 4284415..4285589 | + | 1175 | WP_094096536.1 | IS3 family transposase ISSd1 | Transposase |
| C1P58_RS22125 () | 4285778..4286428 | - | 651 | WP_001007759.1 | metal-binding protein ZinT | - |
| C1P58_RS22130 () | 4286685..4287320 | - | 636 | WP_001240105.1 | protein-methionine-sulfoxide reductase heme-binding subunit MsrQ | - |
| C1P58_RS22135 () | 4287321..4288325 | - | 1005 | WP_000740100.1 | protein-methionine-sulfoxide reductase catalytic subunit MsrP | - |
| C1P58_RS22140 () | 4288434..4288847 | - | 414 | WP_000920127.1 | hydroxyisourate hydrolase | - |
| C1P58_RS22145 () | 4288980..4289651 | + | 672 | WP_001339045.1 | Sensor histidine kinase RcsC | VF |
| C1P58_RS22150 () | 4289651..4291009 | + | 1359 | WP_000826744.1 | two-component system sensor histidine kinase HprS | - |
| C1P58_RS22155 () | 4291117..4291299 | - | 183 | Protein_4199 | protein deglycase HchA | - |
| C1P58_RS22160 () | 4291314..4292011 | - | 698 | Protein_4200 | IS1 family transposase IS1X2 | Transposase |
| C1P58_RS22165 () | 4292121..4292618 | - | 498 | Protein_4201 | porin | - |
| C1P58_RS22170 () | 4292667..4293442 | + | 776 | Protein_4202 | IS3 family transposase IS2 | Transposase |
| C1P58_RS22175 () | 4293522..4294690 | + | 1169 | WP_094096822.1 | IS3 family transposase ISLad1 | Transposase |
| C1P58_RS22180 () | 4294700..4294924 | + | 225 | Protein_4204 | DDE-type integrase/transposase/recombinase | - |
| C1P58_RS22190 () | 4295602..4295967 | + | 366 | WP_001313057.1 | hypothetical protein | - |
| C1P58_RS22195 () | 4296007..4296702 | + | 696 | WP_000365568.1 | phosphohydrolase | - |
| C1P58_RS22200 () | 4296769..4298187 | + | 1419 | WP_073691115.1 | DNA-cytosine methyltransferase | - |
| C1P58_RS22205 () | 4298168..4298638 | + | 471 | WP_073691114.1 | VSPR family DNA mismatch endonuclease | - |
| C1P58_RS22210 () | 4298627..4299547 | - | 921 | WP_001212248.1 | drug/metabolite exporter YedA | - |
| C1P58_RS22215 () | 4299720..4300637 | + | 918 | WP_000922682.1 | DUF808 domain-containing protein | - |
| C1P58_RS22220 () | 4300716..4300898 | + | 183 | WP_000009307.1 | DUF2158 domain-containing protein | - |
| C1P58_RS22225 () | 4301069..4302763 | + | 1695 | WP_077897714.1 | cellulose biosynthesis regulator YedQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|