MGE detailed information
MGE type: Prophage MGE length: 48660 bp
Accession: NZ_CP026765 Location: 615202..663861 Organism: Shigella flexneri strain 04-3145 Replicon: chromosome
Accession: NZ_CP026765 Location: 615202..663861 Organism: Shigella flexneri strain 04-3145 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P85_RS03360 (610294) | 610294..611064 | - | 771 | WP_001139559.1 | 2-oxoglutaramate amidase | - |
| C1P85_RS03365 (611245) | 611245..611691 | + | 447 | WP_005100645.1 | Ivy family C-type lysozyme inhibitor | - |
| C1P85_RS03370 (611734) | 611734..614178 | - | 2445 | WP_025746263.1 | acyl-CoA dehydrogenase FadE | - |
| C1P85_RS03375 (614418) | 614418..614996 | + | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
| C1P85_RS03380 (615202) | 615202..615969 | + | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| C1P85_RS03385 (615940) | 615940..616680 | - | 741 | WP_001225676.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| C1P85_RS03390 (617064) | 617064..617585 | + | 522 | Protein_593 | Murein DD-endopeptidase MepH | VF |
| C1P85_RS03395 (617761) | 617761..618258 | + | 498 | WP_000006251.1 | REP-associated tyrosine transposase RayT | - |
| C1P85_RS03400 (618475) | 618475..620187 | - | 1713 | Protein_595 | Flagellar biosynthesis protein FlhA | VF |
| C1P85_RS03405 (620159) | 620159..620944 | + | 786 | WP_000207561.1 | Chemotaxis protein LafU | VF |
| C1P85_RS03410 (621015) | 621015..622070 | + | 1056 | WP_128882050.1 | DNA polymerase IV | - |
| C1P85_RS03415 (622122) | 622122..622415 | + | 294 | WP_000554759.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| C1P85_RS03420 (622418) | 622418..622816 | + | 399 | WP_001263491.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| C1P85_RS03425 (622826) | 622826..623278 | + | 453 | WP_001059861.1 | GNAT family N-acetyltransferase | - |
| C1P85_RS03430 (623524) | 623524..624567 | + | 1044 | WP_005060486.1 | RNA ligase RtcB family protein | - |
| C1P85_RS03435 (624629) | 624629..625243 | + | 615 | Protein_602 | peptide chain release factor H | - |
| C1P85_RS03440 (625300) | 625300..626757 | - | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| C1P85_RS03445 (627019) | 627019..627477 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| - (628073) | 628073..628153 | + | 81 | NuclAT_9 | - | - |
| - (628073) | 628073..628153 | + | 81 | NuclAT_9 | - | - |
| - (628073) | 628073..628153 | + | 81 | NuclAT_9 | - | - |
| - (628073) | 628073..628153 | + | 81 | NuclAT_9 | - | - |
| C1P85_RS03450 (627569) | 627569..628813 | + | 1245 | WP_000189558.1 | esterase FrsA | - |
| C1P85_RS03455 (628871) | 628871..629272 | + | 402 | WP_000174678.1 | sigma factor-binding protein Crl | - |
| C1P85_RS03460 (629311) | 629311..630366 | - | 1056 | WP_000749864.1 | phosphoporin PhoE | - |
| C1P85_RS03465 (630542) | 630542..631239 | + | 698 | WP_225620329.1 | IS1 family transposase IS1X2 | Transposase |
| C1P85_RS03470 (631430) | 631430..632533 | + | 1104 | WP_001285281.1 | glutamate 5-kinase | - |
| C1P85_RS03475 (632545) | 632545..633798 | + | 1254 | WP_000893267.1 | glutamate-5-semialdehyde dehydrogenase | - |
| C1P85_RS03485 (634003) | 634003..634971 | - | 969 | Protein_611 | Tyrosine recombinase XerC ; Integrase | Integrase |
| C1P85_RS03495 (636236) | 636236..636748 | + | 513 | Protein_613 | hypothetical protein | - |
| C1P85_RS03500 (636720) | 636720..637160 | + | 441 | WP_171763968.1 | tail fiber assembly protein | - |
| C1P85_RS24235 (637394) | 637394..638914 | - | 1521 | WP_241558018.1 | glycosyltransferase family 39 protein | - |
| C1P85_RS03520 (638917) | 638917..639837 | - | 921 | WP_000703663.1 | Prophage bactoprenol glucosyl transferase | VF |
| C1P85_RS03525 (639834) | 639834..640196 | - | 363 | WP_000915849.1 | GtrA family protein | - |
| C1P85_RS03530 (640458) | 640458..640814 | - | 357 | Protein_618 | IS91 family transposase ISTha3 | Transposase |
| C1P85_RS03540 (642179) | 642179..643388 | + | 1210 | Protein_620 | IS3 family transposase IS629 | Transposase |
| C1P85_RS03545 (643372) | 643372..643731 | + | 360 | WP_000563002.1 | hypothetical protein | - |
| C1P85_RS03550 (643731) | 643731..644036 | + | 306 | WP_000206732.1 | protein YfdT | - |
| C1P85_RS24240 (643952) | 643952..644386 | + | 435 | WP_077941726.1 | helix-turn-helix domain-containing protein | - |
| C1P85_RS03560 (644308) | 644308..644979 | + | 672 | Protein_624 | hypothetical protein ; Integrase | Integrase |
| C1P85_RS03565 (645045) | 645045..646189 | + | 1145 | WP_134797288.1 | IS3 family transposase ISSd1 | Transposase |
| C1P85_RS03570 (646222) | 646222..646680 | + | 459 | Protein_626 | site-specific integrase | - |
| C1P85_RS03575 (647029) | 647029..648201 | + | 1173 | WP_171763969.1 | acyltransferase | - |
| C1P85_RS03580 (648255) | 648255..648794 | - | 540 | WP_252981314.1 | phage tail protein | - |
| C1P85_RS03590 (650186) | 650186..651395 | - | 1210 | Protein_630 | IS3 family transposase IS629 | Transposase |
| C1P85_RS03595 (651546) | 651546..652661 | + | 1116 | WP_005053118.1 | diguanylate cyclase AdrA | - |
| C1P85_RS03600 (652678) | 652678..653487 | - | 810 | WP_001295331.1 | pyrroline-5-carboxylate reductase | - |
| C1P85_RS03605 (653607) | 653607..654065 | + | 459 | WP_000158164.1 | YaiI/YqxD family protein | - |
| C1P85_RS03610 (654248) | 654248..654772 | + | 525 | WP_000193385.1 | shikimate kinase AroL | - |
| C1P85_RS03615 (654822) | 654822..655010 | + | 189 | WP_001142438.1 | protein YaiA | - |
| C1P85_RS03620 (655271) | 655271..655948 | + | 678 | WP_001276420.1 | AroM family protein | - |
| C1P85_RS03625 (656020) | 656020..656304 | + | 285 | WP_000941942.1 | pyrimidine/purine nucleoside phosphorylase | - |
| C1P85_RS03630 (656459) | 656459..656794 | + | 336 | Protein_638 | DUF2773 domain-containing protein | - |
| C1P85_RS03635 (656791) | 656791..657246 | + | 456 | WP_000194195.1 | hypothetical protein | - |
| C1P85_RS03640 (657324) | 657324..658235 | - | 912 | WP_005053105.1 | recombination-associated protein RdgC | - |
| C1P85_RS03645 (658360) | 658360..659268 | + | 909 | WP_001219335.1 | fructokinase | - |
| C1P85_RS03650 (659411) | 659411..660592 | - | 1182 | WP_005053102.1 | MFS transporter AraJ | - |
| C1P85_RS03655 (660718) | 660718..663861 | - | 3144 | WP_000698962.1 | exonuclease subunit SbcC | - |
| C1P85_RS03660 (663858) | 663858..665060 | - | 1203 | WP_001221305.1 | exonuclease subunit SbcD | - |
| C1P85_RS03665 (665250) | 665250..665939 | + | 690 | WP_000113937.1 | phosphate response regulator transcription factor PhoB | - |
| C1P85_RS03670 (665997) | 665997..667292 | + | 1296 | WP_000893611.1 | phosphate regulon sensor histidine kinase PhoR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|