MGE detailed information
MGE type: Prophage MGE length: 21448 bp
Accession: NZ_CP026765 Location: 1877844..1899291 Organism: Shigella flexneri strain 04-3145 Replicon: chromosome
Accession: NZ_CP026765 Location: 1877844..1899291 Organism: Shigella flexneri strain 04-3145 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P85_RS10055 (1874506) | 1874506..1876152 | - | 1647 | WP_005050037.1 | medium-chain fatty-acid--CoA ligase | - |
| C1P85_RS10060 (1876209) | 1876209..1876502 | - | 294 | WP_000081083.1 | ferredoxin family protein | - |
| C1P85_RS10065 (1876499) | 1876499..1877788 | - | 1290 | WP_001278524.1 | FAD-dependent oxidoreductase | - |
| C1P85_RS10070 (1877844) | 1877844..1878782 | - | 939 | Protein_1877 | electron transfer flavoprotein subunit alpha | - |
| C1P85_RS10075 (1878802) | 1878802..1879566 | - | 765 | WP_000692136.1 | electron transfer flavoprotein | - |
| C1P85_RS10080 (1879882) | 1879882..1880361 | + | 480 | Protein_1879 | cupin domain-containing protein | - |
| C1P85_RS10085 (1880416) | 1880416..1881113 | + | 698 | WP_232046026.1 | IS1 family transposase IS1X2 | Transposase |
| C1P85_RS10090 (1881107) | 1881107..1881274 | - | 168 | WP_005062520.1 | hypothetical protein | - |
| C1P85_RS10095 (1881676) | 1881676..1882437 | - | 762 | WP_000060475.1 | acid stress response transcriptional regulator YdeO | - |
| C1P85_RS10100 (1882505) | 1882505..1882708 | - | 204 | WP_000543383.1 | two-component system connector SafA | - |
| C1P85_RS10105 (1882956) | 1882956..1885235 | - | 2280 | WP_000726665.1 | acid resistance putative oxidoreductase YdeP | - |
| C1P85_RS10110 (1885569) | 1885569..1885997 | - | 429 | Protein_1885 | Type 1 fimbrin D-mannose specific adhesin | VF |
| C1P85_RS10115 (1886054) | 1886054..1886751 | + | 698 | WP_227804319.1 | IS1 family transposase IS1X2 | Transposase |
| C1P85_RS10120 (1886769) | 1886769..1887647 | + | 879 | Protein_1887 | IS3 family transposase IS600 | Transposase |
| C1P85_RS10125 (1887644) | 1887644..1887949 | - | 306 | WP_071818640.1 | hypothetical protein | - |
| C1P85_RS10130 (1887974) | 1887974..1888213 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| C1P85_RS10135 (1888213) | 1888213..1888500 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| C1P85_RS10140 (1888572) | 1888572..1888727 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| C1P85_RS10145 (1888945) | 1888945..1889196 | + | 252 | WP_000980987.1 | protein Rem | - |
| C1P85_RS10150 (1889263) | 1889263..1889541 | + | 279 | Protein_1893 | hypothetical protein | - |
| C1P85_RS10155 (1889543) | 1889543..1890592 | + | 1050 | WP_001265249.1 | DUF968 domain-containing protein | - |
| C1P85_RS10160 (1890605) | 1890605..1890961 | + | 357 | WP_000904111.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C1P85_RS10165 (1890976) | 1890976..1891797 | + | 822 | WP_000762884.1 | antitermination protein | - |
| C1P85_RS10185 (1892718) | 1892718..1892826 | + | 109 | Protein_1897 | DUF3927 family protein | - |
| C1P85_RS10190 (1893107) | 1893107..1893442 | - | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| C1P85_RS10195 (1893702) | 1893702..1893887 | + | 186 | Protein_1899 | DUF1737 domain-containing protein | - |
| C1P85_RS24025 (1893887) | 1893887..1894048 | + | 162 | WP_001323614.1 | hypothetical protein | - |
| C1P85_RS10200 (1894198) | 1894198..1894377 | + | 180 | WP_000372594.1 | class II holin family protein | - |
| C1P85_RS10210 (1895620) | 1895620..1896639 | + | 1020 | Protein_1903 | MHS family MFS transporter YdfJ | - |
| C1P85_RS10215 (1896728) | 1896728..1898188 | + | 1461 | WP_000527804.1 | mannitol dehydrogenase family protein | - |
| C1P85_RS10220 (1898224) | 1898224..1898427 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| C1P85_RS10225 (1898605) | 1898605..1899291 | - | 687 | WP_005127032.1 | DNA-binding transcriptional regulator rspR | - |
| C1P85_RS10230 (1899380) | 1899380..1900126 | - | 747 | WP_005050098.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| C1P85_RS10235 (1900263) | 1900263..1902308 | + | 2046 | WP_005068122.1 | peptidyl-dipeptidase Dcp | - |
| C1P85_RS10240 (1902353) | 1902353..1902871 | - | 519 | WP_001024558.1 | 2-oxo-tetronate isomerase | - |
| C1P85_RS10245 (1903147) | 1903147..1903272 | + | 126 | Protein_1910 | TIGR00156 family protein | - |
| C1P85_RS10250 (1903269) | 1903269..1904015 | + | 747 | Protein_1911 | IS3-like element IS600 family transposase | - |
| C1P85_RS24365 (1904160) | 1904160..1904263 | - | 104 | Protein_1912 | protein MgtT | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|