MGE detailed information
MGE type: IScluster/Tn MGE length: 36915 bp
Accession: NZ_CP026763 Location: 62198..99112 Organism: Shigella boydii strain NCTC 9850 Replicon: plasmid unnamed
Accession: NZ_CP026763 Location: 62198..99112 Organism: Shigella boydii strain NCTC 9850 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P50_RS24545 () | 57741..60002 | + | 2262 | WP_001100761.1 | TonB-dependent receptor | - |
| C1P50_RS24555 () | 60071..61246 | + | 1176 | WP_001020414.1 | enterotoxin production-related protein TieB | - |
| C1P50_RS24565 () | 61705..62055 | + | 351 | WP_171525606.1 | HNH endonuclease | - |
| C1P50_RS24570 () | 62198..62419 | + | 222 | Protein_67 | IS66 family transposase ISCro1 | Transposase |
| C1P50_RS24575 () | 62440..62502 | - | 63 | Protein_68 | IS66 family transposase ISCro1 | Transposase |
| C1P50_RS24580 () | 62953..64365 | + | 1413 | WP_001026856.1 | hypothetical protein | VF |
| C1P50_RS24585 () | 64469..64617 | - | 149 | Protein_70 | IS1 family transposase | - |
| C1P50_RS24590 () | 64693..66390 | + | 1698 | WP_011310400.1 | hypothetical protein | VF |
| C1P50_RS24600 () | 66507..66626 | + | 120 | Protein_72 | IS66 family insertion sequence hypothetical protein | - |
| C1P50_RS24610 () | 66793..67065 | + | 273 | WP_000019158.1 | hypothetical protein | - |
| C1P50_RS24615 () | 67046..68254 | + | 1209 | WP_134795476.1 | IS91 family transposase ISSbo1 | Transposase |
| C1P50_RS24620 () | 68427..68522 | - | 96 | Protein_75 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C1P50_RS24625 () | 68522..68605 | - | 84 | Protein_76 | CopG family transcriptional regulator | - |
| C1P50_RS24630 () | 68635..68964 | - | 330 | Protein_77 | Tn3 family transposase TnpA_ISSod9 | Transposase |
| C1P50_RS24635 () | 69049..69414 | + | 366 | WP_000124079.1 | hypothetical protein | - |
| C1P50_RS24640 () | 69414..70601 | + | 1188 | WP_024258531.1 | IS91 family transposase ISEc37 | Transposase |
| C1P50_RS24660 () | 71138..71425 | - | 288 | WP_000865087.1 | helix-turn-helix transcriptional regulator | - |
| C1P50_RS24665 () | 71425..71736 | - | 312 | WP_000483533.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C1P50_RS24670 () | 72201..73397 | + | 1197 | WP_012421555.1 | IS110 family transposase ISEc20 | Transposase |
| C1P50_RS24675 () | 73768..74034 | - | 267 | WP_000957717.1 | hypothetical protein | VF |
| C1P50_RS24680 () | 74216..74314 | - | 99 | Protein_84 | transposase | - |
| C1P50_RS24685 () | 74374..75071 | + | 698 | Protein_85 | IS1 family transposase IS1R | Transposase |
| C1P50_RS24690 () | 75403..76191 | + | 789 | WP_005116773.1 | AraC family invasion system transcriptional regulator VirF | - |
| C1P50_RS24695 () | 76184..76555 | - | 372 | Protein_87 | IS21 family transposase IS100 | Transposase |
| C1P50_RS24700 () | 76554..76972 | + | 419 | Protein_88 | transposase | - |
| C1P50_RS24705 () | 77046..78214 | + | 1169 | WP_094096743.1 | IS3 family transposase | - |
| C1P50_RS24715 () | 78419..79546 | + | 1128 | WP_001063816.1 | IS110 family transposase ISSso6 | Transposase |
| C1P50_RS24720 () | 79894..80328 | + | 435 | WP_001403014.1 | IS66 family transposase ISEc43 | Transposase |
| C1P50_RS24725 () | 80325..80675 | + | 351 | WP_000624688.1 | IS66 family transposase ISEc47 | Transposase |
| C1P50_RS24730 () | 80706..82298 | + | 1593 | WP_134795355.1 | IS66 family transposase ISEc47 | Transposase |
| C1P50_RS24735 () | 82458..82613 | + | 156 | Protein_94 | IS256 family transposase ISEc39 | Transposase |
| C1P50_RS24740 () | 82643..84370 | - | 1728 | WP_012421744.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| C1P50_RS24745 () | 84760..85028 | - | 269 | Protein_96 | hypothetical protein | VF |
| C1P50_RS25685 () | 85175..85318 | - | 144 | Protein_97 | IS1 family transposase | - |
| C1P50_RS25605 () | 85676..85828 | - | 153 | WP_011114782.1 | hypothetical protein | - |
| C1P50_RS24755 () | 85867..86390 | + | 524 | Protein_99 | IS3 family transposase ISSfl11 | Transposase |
| C1P50_RS24770 () | 87949..88131 | + | 183 | WP_089519923.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P50_RS24775 () | 88151..89752 | + | 1602 | WP_004967149.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P50_RS24780 () | 89752..90249 | + | 498 | Protein_103 | IS1 family transposase | - |
| C1P50_RS25610 () | 90408..91046 | + | 639 | WP_000607008.1 | hypothetical protein | VF |
| C1P50_RS24790 () | 91161..91430 | + | 270 | Protein_105 | IS3 family transposase ISEc48 | Transposase |
| C1P50_RS24795 () | 91518..92746 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| C1P50_RS24805 () | 92994..93120 | + | 127 | Protein_107 | IS110 family transposase | - |
| C1P50_RS24810 () | 93130..93729 | - | 600 | Protein_108 | IS3 family transposase | - |
| C1P50_RS24815 () | 93786..94999 | + | 1214 | WP_164997312.1 | IS3 family transposase IS629 | Transposase |
| C1P50_RS24825 () | 95043..95611 | - | 569 | Protein_110 | IS3 family transposase IS911 | Transposase |
| C1P50_RS24840 () | 96284..96568 | + | 285 | WP_011114751.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| C1P50_RS24845 () | 96556..97041 | + | 486 | WP_000501969.1 | GNAT family N-acetyltransferase | Toxin Detail |
| C1P50_RS24850 () | 97082..97870 | - | 789 | Protein_113 | IS66 family transposase ISEc43 | Transposase |
| C1P50_RS24860 () | 99161..99340 | + | 180 | Protein_115 | transposase | - |
| C1P50_RS24870 () | 99866..101044 | + | 1179 | WP_073714961.1 | group II intron reverse transcriptase/maturase | - |
| C1P50_RS24875 () | 101127..101306 | + | 180 | Protein_117 | transposase domain-containing protein | - |
| C1P50_RS24880 () | 101336..101818 | - | 483 | Protein_118 | IS110 family transposase | - |
| C1P50_RS24885 () | 102074..103054 | - | 981 | WP_000431558.1 | ParB/RepB/Spo0J family partition protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|