MGE detailed information
MGE type: IScluster/Tn MGE length: 18718 bp
Accession: NZ_CP026762 Location: 666440..685157 Organism: Shigella boydii strain NCTC 9850 Replicon: chromosome
Accession: NZ_CP026762 Location: 666440..685157 Organism: Shigella boydii strain NCTC 9850 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P50_RS03685 () | 662486..663075 | + | 590 | Protein_672 | Ail/Lom family outer membrane beta-barrel protein | - |
| C1P50_RS03690 () | 663140..664375 | + | 1236 | WP_073715028.1 | prophage tail fiber N-terminal domain-containing protein | - |
| C1P50_RS03695 () | 664461..664973 | + | 513 | WP_000539253.1 | receptor recognizing protein Gp38 | - |
| C1P50_RS03700 () | 665049..665261 | + | 213 | WP_001114260.1 | DUF4376 domain-containing protein | - |
| C1P50_RS03705 () | 665403..665727 | - | 325 | Protein_676 | YkgJ family cysteine cluster protein | - |
| C1P50_RS03715 () | 665863..666111 | - | 249 | WP_001217553.1 | DinI-like family protein | - |
| C1P50_RS03720 () | 666208..666384 | + | 177 | WP_000530012.1 | hypothetical protein | - |
| C1P50_RS03725 () | 666440..667137 | - | 698 | Protein_679 | IS1 family transposase IS1R | Transposase |
| C1P50_RS03730 () | 667242..667589 | - | 348 | Protein_680 | hydrolase | - |
| C1P50_RS03735 () | 667616..668812 | - | 1197 | WP_012421314.1 | IS110 family transposase ISEc20 | Transposase |
| C1P50_RS03740 () | 669004..669258 | - | 255 | WP_000891627.1 | isochorismatase family protein | - |
| C1P50_RS03745 () | 669568..671340 | + | 1773 | WP_001258662.1 | aspartate--tRNA ligase | - |
| C1P50_RS03750 () | 671458..671910 | + | 453 | WP_001300367.1 | dihydroneopterin triphosphate diphosphatase | - |
| C1P50_RS03755 () | 671939..672679 | + | 741 | WP_000907247.1 | putative transcriptional regulatory protein YebC | VF |
| C1P50_RS03760 () | 672714..673235 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| C1P50_RS25325 () | 673237..673389 | - | 153 | WP_005117602.1 | hypothetical protein | - |
| C1P50_RS25445 () | 673391..673492 | - | 102 | Protein_688 | IS1 family transposase | - |
| C1P50_RS03770 () | 673580..673999 | + | 420 | WP_000435414.1 | IS66 family transposase IS682 | Transposase |
| C1P50_RS03775 () | 673996..674346 | + | 351 | WP_000623347.1 | IS66 family transposase IS682 | Transposase |
| C1P50_RS03780 () | 674377..675969 | + | 1593 | WP_001072392.1 | IS66 family transposase ISEc43 | Transposase |
| C1P50_RS03790 () | 676262..677389 | - | 1128 | WP_001063816.1 | IS110 family transposase ISSso6 | Transposase |
| C1P50_RS03795 () | 677521..677820 | - | 300 | Protein_693 | IS1 family transposase IS1X2 | Transposase |
| C1P50_RS03805 () | 679133..679963 | + | 831 | WP_039059216.1 | DUF945 domain-containing protein | - |
| C1P50_RS03810 () | 680045..680524 | + | 480 | WP_000860059.1 | antirestriction protein | - |
| C1P50_RS03815 () | 680540..681016 | + | 477 | WP_012421636.1 | RadC family protein | - |
| C1P50_RS03820 () | 681079..681300 | + | 222 | WP_000692323.1 | DUF987 domain-containing protein | - |
| C1P50_RS03825 () | 681374..681742 | + | 369 | WP_001285585.1 | type IV toxin-antitoxin system toxin CbtA | Antitoxin Detail |
| C1P50_RS03830 () | 681831..682205 | + | 375 | WP_000854814.1 | type IV toxin-antitoxin system toxin CbtA | Toxin Detail |
| C1P50_RS03835 () | 682202..682396 | + | 195 | WP_000988600.1 | hypothetical protein | - |
| C1P50_RS25450 () | 682409..682522 | + | 114 | WP_001161660.1 | DUF957 domain-containing protein | - |
| C1P50_RS03845 () | 682911..684014 | + | 1104 | WP_134795469.1 | IS110 family transposase ISSso6 | Transposase |
| C1P50_RS03855 () | 685557..685796 | - | 240 | Protein_705 | nickel/cobalt efflux protein RcnA | - |
| C1P50_RS03860 () | 685917..686189 | + | 273 | WP_000019944.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| C1P50_RS03865 () | 686412..687200 | + | 789 | WP_001195636.1 | hydroxyethylthiazole kinase | - |
| C1P50_RS03870 () | 687197..687997 | + | 801 | WP_000822274.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| C1P50_RS03875 () | 688062..688880 | + | 819 | WP_005031483.1 | glycoside hydrolase family 25 protein | - |
| C1P50_RS03880 () | 688932..689678 | + | 747 | WP_000434038.1 | GntR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|