MGE detailed information
MGE type: Genomic_island MGE length: 23142 bp
Accession: NZ_CP026762 Location: 583615..606756 Organism: Shigella boydii strain NCTC 9850 Replicon: chromosome
Accession: NZ_CP026762 Location: 583615..606756 Organism: Shigella boydii strain NCTC 9850 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P50_RS03140 () | 582607..583404 | - | 798 | WP_001302302.1 | DgsA anti-repressor MtfA | - |
| C1P50_RS03150 () | 583615..584070 | - | 456 | WP_114142313.1 | hypothetical protein ; Integrase | Integrase |
| C1P50_RS03155 () | 584120..584817 | + | 698 | Protein_575 | IS1 family transposase IS1X2 | Transposase |
| C1P50_RS03160 () | 584767..585072 | - | 306 | Protein_576 | hypothetical protein | - |
| C1P50_RS03165 () | 585139..586295 | + | 1157 | WP_134795349.1 | IS3 family transposase IS600 | Transposase |
| C1P50_RS03175 () | 586339..586638 | - | 300 | Protein_578 | DUF968 domain-containing protein | - |
| C1P50_RS03180 () | 586678..588216 | - | 1539 | Protein_579 | IS66 family transposase ISEc22 | Transposase |
| C1P50_RS03185 () | 588265..588612 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| C1P50_RS03190 () | 588609..588989 | - | 381 | WP_001333468.1 | IS66 family transposase ISEc8 | Transposase |
| C1P50_RS03195 () | 589344..590471 | - | 1128 | WP_001063816.1 | IS110 family transposase ISSso6 | Transposase |
| C1P50_RS03200 () | 590602..591063 | - | 462 | Protein_583 | hypothetical protein | - |
| C1P50_RS03205 () | 591065..591343 | - | 279 | WP_000929754.1 | hypothetical protein | - |
| C1P50_RS03215 () | 591511..591666 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - () | 591678..591736 | + | 59 | - | - | Antitoxin Detail |
| C1P50_RS03230 () | 592318..592760 | - | 443 | Protein_586 | hypothetical protein | - |
| C1P50_RS03235 () | 592804..593184 | + | 381 | WP_001333468.1 | IS66 family transposase ISEc8 | Transposase |
| C1P50_RS03240 () | 593181..593528 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| C1P50_RS03245 () | 593577..595115 | + | 1539 | WP_134795351.1 | IS66 family transposase ISEc22 | Transposase |
| C1P50_RS03250 () | 595112..595471 | + | 360 | WP_073692993.1 | 3'-5' exoribonuclease | - |
| C1P50_RS03255 () | 595530..595733 | + | 204 | WP_000096344.1 | DUF4224 domain-containing protein | - |
| C1P50_RS03260 () | 595733..596088 | + | 356 | Protein_592 | integrase | - |
| C1P50_RS03275 () | 597529..598119 | + | 591 | WP_000377820.1 | DUF2313 domain-containing protein | - |
| C1P50_RS25425 () | 598106..598773 | + | 668 | Protein_595 | phage tail protein | - |
| C1P50_RS25430 () | 598794..598997 | + | 204 | Protein_596 | phage tail protein | - |
| C1P50_RS03285 () | 599015..599712 | - | 698 | Protein_597 | IS1 family transposase IS1R | Transposase |
| C1P50_RS25435 () | 599762..600091 | + | 330 | WP_134795467.1 | hypothetical protein | - |
| C1P50_RS03295 () | 600094..600639 | + | 546 | WP_000902895.1 | tail fiber assembly protein | - |
| C1P50_RS03300 () | 600663..601721 | + | 1059 | WP_012421291.1 | prophage tail fiber N-terminal domain-containing protein | - |
| C1P50_RS03305 () | 601672..602295 | + | 624 | WP_000930154.1 | DUF4376 domain-containing protein | - |
| C1P50_RS25440 () | 602295..602474 | + | 180 | WP_001039895.1 | hypothetical protein | - |
| C1P50_RS03315 () | 602475..604118 | - | 1644 | WP_005136793.1 | E3 ubiquitin-protein ligase ipaH3 | VF |
| C1P50_RS03320 () | 604434..605102 | - | 669 | WP_000239869.1 | class I SAM-dependent methyltransferase | - |
| C1P50_RS03325 () | 605159..605428 | + | 270 | WP_000937487.1 | tail fiber assembly protein | - |
| C1P50_RS03340 () | 606819..607709 | - | 891 | Protein_607 | trehalose-6-phosphate synthase | - |
| C1P50_RS03345 () | 607684..608484 | - | 801 | WP_000138770.1 | trehalose-phosphatase | - |
| C1P50_RS03350 () | 608651..609637 | - | 987 | WP_000100203.1 | arabinose ABC transporter permease AraH | - |
| C1P50_RS03355 () | 609652..611166 | - | 1515 | WP_001187803.1 | arabinose ABC transporter ATP-binding protein AraG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|