MGE detailed information
MGE type: Conjugative plasmid MGE length: 83010 bp
Accession: NZ_CP026726 Location: 1..83010 Organism: Escherichia coli strain 266917_2 Replicon: plasmid p266917_2_03
Accession: NZ_CP026726 Location: 1..83010 Organism: Escherichia coli strain 266917_2 Replicon: plasmid p266917_2_03
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C4R22_RS30180 () | 46..1077 | + | 1032 | WP_023518831.1 | RepZ | - |
| C4R22_RS31955 () | 1773..1913 | + | 141 | WP_032072206.1 | hypothetical protein | - |
| C4R22_RS30200 () | 2146..2655 | - | 510 | WP_012783913.1 | hypothetical protein | - |
| C4R22_RS30205 () | 2711..3313 | - | 603 | WP_001703912.1 | hypothetical protein | - |
| C4R22_RS30215 () | 3667..5013 | + | 1347 | WP_001703911.1 | hypothetical protein | - |
| C4R22_RS31960 () | 5520..5822 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| C4R22_RS30230 () | 5819..6445 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| C4R22_RS30235 () | 6625..7896 | - | 1272 | WP_001703910.1 | Y-family DNA polymerase | - |
| C4R22_RS30240 () | 7896..8333 | - | 438 | WP_000109078.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| C4R22_RS30245 () | 8330..8578 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| C4R22_RS30255 () | 8996..9898 | + | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| C4R22_RS30260 () | 9993..10328 | - | 336 | WP_001340323.1 | hypothetical protein | - |
| C4R22_RS30265 () | 10666..11646 | + | 981 | WP_012783921.1 | plasmid segregation protein ParM | - |
| C4R22_RS30270 () | 11649..12071 | + | 423 | WP_000774832.1 | plasmid partitioning/stability family protein | - |
| C4R22_RS30275 () | 12075..12386 | + | 312 | WP_096035146.1 | hypothetical protein | - |
| C4R22_RS30280 () | 12462..13145 | + | 684 | WP_000086127.1 | DNA methylase | - |
| C4R22_RS30285 () | 13146..13367 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| C4R22_RS30290 () | 13381..13815 | + | 435 | WP_011264065.1 | DUF1380 family protein | - |
| C4R22_RS30295 () | 13860..14630 | + | 771 | WP_096947577.1 | hypothetical protein | - |
| C4R22_RS30305 () | 15166..15468 | + | 303 | WP_001436678.1 | antirestriction protein | - |
| C4R22_RS30310 () | 15515..15937 | + | 423 | WP_104858494.1 | DUF1380 family protein | - |
| C4R22_RS30315 () | 15934..16125 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| C4R22_RS30325 () | 16196..16510 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| C4R22_RS30335 () | 16894..17421 | + | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| C4R22_RS30340 () | 17479..17712 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| C4R22_RS30345 () | 17771..19729 | + | 1959 | WP_104858495.1 | ParB/RepB/Spo0J family partition protein | - |
| C4R22_RS30350 () | 19782..20216 | + | 435 | WP_001402001.1 | conjugation system SOS inhibitor PsiB | - |
| C4R22_RS30355 () | 20213..20932 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| C4R22_RS30360 () | 20929..21525 | + | 597 | WP_000977995.1 | hypothetical protein | - |
| C4R22_RS30370 () | 21987..22487 | + | 501 | WP_000117626.1 | antirestriction protein ArdA | - |
| C4R22_RS30385 () | 23216..23650 | + | 435 | WP_000218858.1 | hypothetical protein | - |
| C4R22_RS30390 () | 23744..24010 | + | 267 | WP_000804663.1 | hypothetical protein | - |
| C4R22_RS30395 () | 24187..24576 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| C4R22_RS30400 () | 24573..25475 | + | 903 | WP_011264057.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| C4R22_RS30405 () | 25537..25743 | + | 207 | WP_000150314.1 | hypothetical protein | - |
| C4R22_RS30410 () | 25774..26025 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| C4R22_RS31965 () | 26059..26256 | - | 198 | WP_001161107.1 | hypothetical protein | - |
| C4R22_RS30425 () | 26605..27453 | + | 849 | WP_001599394.1 | DUF4942 domain-containing protein | - |
| C4R22_RS30430 () | 27540..27875 | - | 336 | WP_021529212.1 | hypothetical protein | - |
| C4R22_RS30435 () | 28109..28441 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| C4R22_RS30440 () | 28452..31151 | + | 2700 | WP_011264053.1 | IncI1-type relaxase NikB | - |
| C4R22_RS30445 () | 31189..33480 | - | 2292 | WP_011264051.1 | hypothetical protein | - |
| C4R22_RS30450 () | 33473..34543 | - | 1071 | WP_011264050.1 | IncI1-type conjugal transfer protein TrbB | - |
| C4R22_RS30455 () | 34562..35770 | - | 1209 | WP_011264049.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 35950..36007 | - | 58 | NuclAT_1 | - | - |
| - () | 35950..36007 | - | 58 | NuclAT_1 | - | - |
| - () | 35950..36007 | - | 58 | NuclAT_1 | - | - |
| - () | 35950..36007 | - | 58 | NuclAT_1 | - | - |
| C4R22_RS30460 () | 36077..37168 | - | 1092 | WP_069067420.1 | protein finQ | - |
| - () | 37371..37431 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 37371..37431 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 37371..37431 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 37371..37431 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| C4R22_RS30465 () | 37483..37635 | + | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| C4R22_RS30470 () | 37707..37958 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| C4R22_RS30475 () | 38258..38554 | + | 297 | WP_011264046.1 | hypothetical protein | - |
| C4R22_RS31970 () | 38619..38795 | - | 177 | WP_001054897.1 | hypothetical protein | - |
| C4R22_RS30480 () | 39187..39396 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| C4R22_RS30485 () | 39468..40130 | - | 663 | WP_000644796.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| C4R22_RS30490 () | 40201..42369 | - | 2169 | WP_023518847.1 | DotA/TraY family protein | - |
| C4R22_RS30495 () | 42466..43050 | - | 585 | WP_001746157.1 | IncI1-type conjugal transfer protein TraX | - |
| C4R22_RS30500 () | 43079..44281 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| C4R22_RS30505 () | 44248..44862 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| C4R22_RS30510 () | 44862..47906 | - | 3045 | WP_023518848.1 | IncI1-type conjugal transfer protein TraU | - |
| C4R22_RS30515 () | 47996..48796 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| C4R22_RS30520 () | 48780..48968 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| C4R22_RS30525 () | 49032..49436 | - | 405 | WP_000086965.1 | IncI1-type conjugal transfer protein TraR | - |
| C4R22_RS30530 () | 49487..50014 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| C4R22_RS30535 () | 50014..50718 | - | 705 | WP_104858496.1 | IncI1-type conjugal transfer protein TraP | - |
| C4R22_RS30540 () | 50718..52007 | - | 1290 | WP_011264042.1 | conjugal transfer protein TraO | - |
| C4R22_RS30545 () | 52010..52993 | - | 984 | WP_001191880.1 | IncI1-type conjugal transfer protein TraN | - |
| C4R22_RS30550 () | 53004..53696 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| C4R22_RS30555 () | 53693..54040 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| C4R22_RS30560 () | 54058..57825 | - | 3768 | WP_104858497.1 | DNA primase | - |
| C4R22_RS30565 () | 57915..58466 | - | 552 | WP_000014584.1 | phospholipase D family protein | - |
| C4R22_RS30570 () | 58481..58771 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| C4R22_RS30575 () | 58768..59916 | - | 1149 | WP_001024972.1 | plasmid transfer ATPase TraJ | - |
| C4R22_RS30580 () | 59913..60731 | - | 819 | WP_000646097.1 | IncI1-type conjugal transfer lipoprotein TraI | - |
| C4R22_RS30585 () | 60728..61186 | - | 459 | WP_001079808.1 | IncI1-type conjugal transfer lipoprotein TraH | - |
| C4R22_RS30590 () | 61581..62165 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| C4R22_RS30595 () | 62225..63427 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| C4R22_RS30600 () | 63513..64337 | - | 825 | WP_023518851.1 | hypothetical protein | - |
| C4R22_RS30605 () | 64488..65642 | - | 1155 | WP_001139955.1 | integrase | - |
| C4R22_RS30610 () | 65770..65925 | + | 156 | WP_001302705.1 | hypothetical protein | - |
| C4R22_RS30635 () | 67590..68800 | - | 1211 | Protein_76 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| C4R22_RS30640 () | 68800..69456 | - | 657 | WP_001401940.1 | prepilin peptidase | - |
| C4R22_RS30645 () | 69441..70001 | - | 561 | WP_000014005.1 | lytic transglycosylase domain-containing protein | - |
| C4R22_RS30650 () | 70011..70625 | - | 615 | WP_000908227.1 | type IV prepilin | - |
| C4R22_RS30655 () | 70642..71727 | - | 1086 | WP_001208802.1 | type II secretion system F family protein | - |
| C4R22_RS30660 () | 71740..73293 | - | 1554 | WP_023518854.1 | Flp pilus assembly complex ATPase component TadA | - |
| C4R22_RS30665 () | 73304..73756 | - | 453 | WP_001247337.1 | type IV pilus biogenesis protein PilP | - |
| C4R22_RS30670 () | 73743..75038 | - | 1296 | WP_023518855.1 | type 4b pilus protein PilO2 | - |
| C4R22_RS30675 () | 75031..76713 | - | 1683 | WP_000748143.1 | PilN family type IVB pilus formation outer membrane protein | - |
| C4R22_RS30680 () | 76727..77164 | - | 438 | WP_000539806.1 | type IV pilus biogenesis protein PilM | - |
| C4R22_RS30685 () | 77164..78231 | - | 1068 | WP_001360287.1 | type IV pilus biogenesis lipoprotein PilL | - |
| C4R22_RS30700 () | 79278..79532 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| C4R22_RS30705 () | 79704..80387 | - | 684 | WP_023518856.1 | conjugal transfer protein TraC | - |
| C4R22_RS30715 () | 80641..81174 | - | 534 | WP_001712498.1 | transcription termination factor nusG family protein | - |
| C4R22_RS30725 () | 81616..81903 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| C4R22_RS30730 () | 81821..82084 | - | 264 | WP_032180564.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|