MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 42930 bp
Accession: NZ_CP026699 Location: 1..42930 Organism: Citrobacter koseri strain AR_0025 Replicon: plasmid unitig_3_pilon
Accession: NZ_CP026699 Location: 1..42930 Organism: Citrobacter koseri strain AR_0025 Replicon: plasmid unitig_3_pilon
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM352_RS24025 () | 481..1200 | + | 720 | WP_158661224.1 | type-F conjugative transfer system secretin TraK | - |
| AM352_RS24030 () | 1197..2573 | + | 1377 | WP_104869166.1 | conjugal transfer protein TraB | - |
| AM352_RS24035 () | 2583..3047 | + | 465 | WP_104869167.1 | type IV conjugative transfer system lipoprotein TraV | - |
| AM352_RS24040 () | 3047..5647 | + | 2601 | WP_104869168.1 | type IV secretion system protein TraC | - |
| AM352_RS24045 () | 5829..6167 | + | 339 | WP_104869206.1 | TrbI F-type domain-containing protein | - |
| AM352_RS24050 () | 6167..6808 | + | 642 | WP_104869169.1 | type-F conjugative transfer system protein TraW | - |
| AM352_RS24055 () | 6805..7794 | + | 990 | WP_104869170.1 | conjugal transfer pilus assembly protein TraU | - |
| AM352_RS24060 () | 7871..8632 | + | 762 | WP_104869171.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| AM352_RS24065 () | 8625..9560 | + | 936 | WP_104869172.1 | hypothetical protein | - |
| AM352_RS24070 () | 9564..10550 | + | 987 | WP_104869173.1 | conjugal transfer protein TraN | - |
| AM352_RS24075 () | 10565..11350 | + | 786 | WP_104869174.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| AM352_RS24080 () | 11365..11910 | + | 546 | WP_104869175.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| AM352_RS24085 () | 11983..12462 | + | 480 | WP_104869176.1 | hypothetical protein | - |
| AM352_RS24090 () | 12459..13844 | + | 1386 | WP_104869177.1 | conjugal transfer protein TraH | - |
| AM352_RS24095 () | 13841..16888 | + | 3048 | WP_104869178.1 | conjugal transfer mating pair stabilization protein TraG | - |
| AM352_RS24100 () | 17013..17468 | + | 456 | WP_158661225.1 | hypothetical protein | - |
| AM352_RS24105 () | 17709..18236 | + | 528 | WP_104869180.1 | hypothetical protein | - |
| AM352_RS24110 () | 18309..18764 | + | 456 | WP_104869181.1 | Membrane-bound lytic murein transglycosylase C | VF |
| AM352_RS24115 () | 18761..21130 | + | 2370 | WP_104869182.1 | type IV conjugative transfer system coupling protein TraD | - |
| AM352_RS24120 () | 21134..26326 | + | 5193 | WP_104869183.1 | Multifunctional conjugation protein TraI | Relaxase |
| AM352_RS24125 () | 26504..26710 | + | 207 | WP_104869184.1 | hypothetical protein | - |
| AM352_RS24130 () | 26880..27158 | + | 279 | WP_104869185.1 | replication regulatory protein RepA | - |
| AM352_RS24135 () | 27369..27446 | + | 78 | WP_032489431.1 | RepA leader peptide Tap | - |
| AM352_RS24140 () | 27427..28341 | + | 915 | WP_104869186.1 | replication initiation protein | - |
| AM352_RS24145 () | 29957..30262 | + | 306 | WP_104869187.1 | hypothetical protein | - |
| AM352_RS24150 () | 30307..31587 | - | 1281 | WP_104869188.1 | hypothetical protein | - |
| AM352_RS24155 () | 31795..32193 | + | 399 | WP_104869207.1 | Exc2 family lipoprotein | - |
| AM352_RS24165 () | 32932..33213 | - | 282 | WP_104869189.1 | hypothetical protein | - |
| AM352_RS24170 () | 33460..33738 | - | 279 | WP_104869208.1 | stability/ partitioning determinant | - |
| AM352_RS24175 () | 33834..34496 | - | 663 | WP_104869190.1 | Septum site-determining protein MinD | VF |
| AM352_RS24185 () | 34950..35432 | + | 483 | WP_104869191.1 | hypothetical protein | - |
| AM352_RS24190 () | 35917..36267 | + | 351 | WP_104869192.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AM352_RS24195 () | 36264..36563 | + | 300 | WP_104869193.1 | XRE family transcriptional regulator | Antitoxin Detail |
| AM352_RS24205 () | 37176..37481 | + | 306 | WP_104869209.1 | hypothetical protein | - |
| AM352_RS24210 () | 37550..37843 | + | 294 | WP_104869195.1 | hypothetical protein | - |
| AM352_RS24215 () | 37926..38168 | + | 243 | WP_104869196.1 | hypothetical protein | - |
| AM352_RS24220 () | 38158..38373 | + | 216 | WP_104869197.1 | hypothetical protein | - |
| AM352_RS24225 () | 38465..38794 | + | 330 | WP_104869198.1 | hypothetical protein | - |
| AM352_RS24230 () | 38856..39038 | + | 183 | WP_104869199.1 | hypothetical protein | - |
| AM352_RS24245 () | 40148..40525 | + | 378 | WP_104869202.1 | hypothetical protein | - |
| AM352_RS24250 () | 41144..41625 | + | 482 | Protein_41 | transcription termination factor NusG | - |
| AM352_RS24255 () | 41603..42055 | + | 453 | WP_104869203.1 | hypothetical protein | - |
| AM352_RS24260 () | 42188..42532 | + | 345 | WP_104869204.1 | hypothetical protein | - |
| AM352_RS24265 () | 42543..42848 | + | 306 | WP_104869205.1 | type IV conjugative transfer system protein TraL | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|